UBOX5 (U-box domain containing 5)

Identity

Other names	KIAA0860
	RNF37
	UBCE7IP5
	UIP5
HGNC	UBOX5
Location	20p13
Location_base_pair	Starts at 3036219 and ends at 3088540 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	UBOX5   17777
Entrez_Gene	UBOX5  22888  U-box domain containing 5
	Cards
GeneCards	UBOX5
Ensembl	ENSG00000185019 [Gene_View]  UBOX5 [Vega]
Genatlas	UBOX5
	Genomic and cartography
GoldenPath	UBOX5  -  20p13   chr20:3036219-3088540 -  20p13   [Description]    (hg18-March_2006)
Ensembl	UBOX5 - 20p13 [CytoView]
NCBI	Mapview
HomoloGene	UBOX5
	Gene and transcription
Genbank	AB020667 [ ENTREZ ]
Genbank	AK022444 [ ENTREZ ]
Genbank	AK222570 [ ENTREZ ]
Genbank	AK222876 [ ENTREZ ]
Genbank	BC000515 [ ENTREZ ]
RefSeq	NM_014948 [ SRS ]    NM_014948 [ ENTREZ ]
RefSeq	NM_199415 [ SRS ]    NM_199415 [ ENTREZ ]
RefSeq	AC_000063 [ SRS ]    AC_000063 [ ENTREZ ]
RefSeq	AC_000152 [ SRS ]    AC_000152 [ ENTREZ ]
RefSeq	NC_000020 [ SRS ]    NC_000020 [ ENTREZ ]
RefSeq	NT_011387 [ SRS ]    NT_011387 [ ENTREZ ]
RefSeq	NW_001838652 [ SRS ]    NW_001838652 [ ENTREZ ]
RefSeq	NW_927317 [ SRS ]    NW_927317 [ ENTREZ ]
CCDS	UBOX5 CCDS - NCBI
AceView	UBOX5 AceView - NCBI
Unigene	Hs.654646 [ SRS ]    Hs.654646 [ NCBI ]
Fast-db	2884 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	O94941 [ SRS]    O94941 [ EXPASY ]     O94941 [ INTERPRO ]     O94941 [ UNIPROT ] O94941 [ VarSplice FASTA ]
Prosite	PS00518 ZF_RING_1 [ SRS ]    PS00518 ZF_RING_1 [ Expasy ]
Prosite	PS50089 ZF_RING_2 [ SRS ]    PS50089 ZF_RING_2 [ Expasy ]
Interpro	IPR003613 Ubox [ SRS ]    IPR003613 Ubox [ EBI ]
Interpro	IPR001841 Znf_RING [ SRS ]    IPR001841 Znf_RING [ EBI ]
Interpro	IPR013083 Znf_RING/FYVE/PHD [ SRS ]    IPR013083 Znf_RING/FYVE/PHD [ EBI ]
CluSTr	O94941
Pfam	PF04564 U-box [ SRS ]    PF04564 U-box [ Sanger ]    pfam04564 [ NCBI-CDD ]
Smart	SM00184 RING [EMBL]
Smart	SM00504 Ubox [EMBL]
Blocks	O94941
HPRD	15605
	Protein Interaction databases
DIP	O94941
IntAct	O94941
	Polymorphism : SNP, mutations, diseases
SNP	UBOX5 [dbSNP-NCBI]
SNP	NM_014948 [SNP-NCI]
SNP	NM_199415 [SNP-NCI]
SNP	UBOX5 [GeneSNPs - Utah]  UBOX5] [HGBASE - SRS]
HAPMAP	UBOX5 [HAPMAP]
COSMIC	UBOX5 [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	UBOX5
Genetic Association	UBOX5
CDC HuGE	UBOX5
	General knowledge
Family Browser	UBOX5 [UCSC Family Browser]
SOURCE	NM_014948
SOURCE	NM_199415
SMD	Hs.654646
SAGE	Hs.654646
GO	ubiquitin ligase complex [Amigo]  ubiquitin ligase complex
GO	ubiquitin-protein ligase activity [Amigo]  ubiquitin-protein ligase activity
GO	protein binding [Amigo]  protein binding
GO	nucleus [Amigo]  nucleus
GO	zinc ion binding [Amigo]  zinc ion binding
GO	protein ubiquitination [Amigo]  protein ubiquitination
GO	metal ion binding [Amigo]  metal ion binding
PubGene	UBOX5
TreeFam	UBOX5
CTD	22888 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	UBOX5 Related clones (RZPD - Berlin)
	PubMed
PubMed	10 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Dec 6 17:13:54 2008