VPREB1 (pre-B lymphocyte gene 1)

Identity

Other names	IGI
	IGVPB
	VPREB
HGNC	VPREB1
Location	22q11.2|22q11.22
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	VPREB1   12709
Entrez_Gene	VPREB1  7441  pre-B lymphocyte gene 1
	Cards
GeneCards	VPREB1
Ensembl	VPREB1 [Search_View]   ENSG00000169575 [Gene_View]
Genatlas	VPREB1
GeneLynx	VPREB1
eGenome	VPREB1
euGene	7441
	Genomic and cartography
GoldenPath	VPREB1  -  22q11.2|22q11.22   chr22:20929200-20929926 +  22q11.22   [Description]    (hg18-March_2006)
Ensembl	VPREB1 - 22q11.22 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	VPREB1
	Gene and transcription
Genbank	BC017922 [ ENTREZ ]
Genbank	BC152786 [ ENTREZ ]
Genbank	CR456609 [ ENTREZ ]
Genbank	CU013205 [ ENTREZ ]
Genbank	CU013493 [ ENTREZ ]
RefSeq	NM_007128 [ SRS ]    NM_007128 [ ENTREZ ]
RefSeq	AC_000065 [ SRS ]    AC_000065 [ ENTREZ ]
RefSeq	AC_000154 [ SRS ]    AC_000154 [ ENTREZ ]
RefSeq	NC_000022 [ SRS ]    NC_000022 [ ENTREZ ]
RefSeq	NG_000002 [ SRS ]    NG_000002 [ ENTREZ ]
RefSeq	NT_011520 [ SRS ]    NT_011520 [ ENTREZ ]
RefSeq	NW_001838745 [ SRS ]    NW_001838745 [ ENTREZ ]
RefSeq	NW_927628 [ SRS ]    NW_927628 [ ENTREZ ]
AceView	VPREB1 AceView - NCBI
Unigene	Hs.247979 [ SRS ]    Hs.247979 [ NCBI ]     HS247979 [ spliceNest ]
Fast-db	2308 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	P12018 [ SRS]    P12018 [ EXPASY ]     P12018 [ INTERPRO ]     P12018 [ UNIPROT ]
Prosite	PS50835 IG_LIKE [ SRS ]    PS50835 IG_LIKE [ Expasy ]
Interpro	IPR007110 Ig-like [ SRS ]    IPR007110 Ig-like [ EBI ]
Interpro	IPR013783 Ig-like_fold [ SRS ]    IPR013783 Ig-like_fold [ EBI ]
Interpro	IPR013106 Ig_V-set [ SRS ]    IPR013106 Ig_V-set [ EBI ]
Interpro	IPR003596 Ig_V-set_sub [ SRS ]    IPR003596 Ig_V-set_sub [ EBI ]
CluSTr	P12018
Pfam	PF07686 V-set [ SRS ]    PF07686 V-set [ Sanger ]    pfam07686 [ NCBI-CDD ]
Smart	SM00406 IGv [EMBL]
Blocks	P12018
PDB	2H32 [ SRS ]    2H32 [ PdbSum ],   2H32 [ IMB ]   2H32 [ RSDB ]
PDB	2H3N [ SRS ]    2H3N [ PdbSum ],   2H3N [ IMB ]   2H3N [ RSDB ]
PDB	3BJ9 [ SRS ]    3BJ9 [ PdbSum ],   3BJ9 [ IMB ]   3BJ9 [ RSDB ]
HPRD	05505
	Protein Interaction databases
DIP	P12018
IntAct	P12018
	Polymorphism : SNP, mutations, diseases
OMIM	605141    [ map ]
GENECLINICS	605141
SNP	VPREB1 [dbSNP-NCBI]
SNP	NM_007128 [SNP-NCI]
SNP	VPREB1 [GeneSNPs - Utah]  VPREB1] [HGBASE - SRS]
HAPMAP	VPREB1 [HAPMAP]
HGMD	VPREB1
	General knowledge
Family Browser	VPREB1 [UCSC Family Browser]
SOURCE	NM_007128
SMD	Hs.247979
SAGE	Hs.247979
GO	antigen binding [Amigo]  antigen binding
GO	extracellular region [Amigo]  extracellular region
GO	immune response [Amigo]  immune response
PubGene	VPREB1
TreeFam	VPREB1
CTD	7441 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	VPREB1 Related clones (RZPD - Berlin)
	PubMed
PubMed	14 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Aug 11 20:37:59 2008