VPS72 (vacuolar protein sorting 72 homolog (S. cerevisiae))

Identity

Other names	CFL1
	Swc2
	TCFL1
	YL-1
	YL1
HGNC	VPS72
Location	1q21
Location_base_pair	Starts at 149415558 and ends at 149429264 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	VPS72   11644
Entrez_Gene	VPS72  6944  vacuolar protein sorting 72 homolog (S. cerevisiae)
	Cards
GeneCards	VPS72
Ensembl	VPS72 [Search_View]   ENSG00000163159 [Gene_View]
Genatlas	VPS72
GeneLynx	VPS72
eGenome	VPS72
euGene	6944
	Genomic and cartography
GoldenPath	VPS72  -  1q21   chr1:149415558-149429264 -  1q21.2   [Description]    (hg18-March_2006)
Ensembl	VPS72 - 1q21.2 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	VPS72
	Gene and transcription
Genbank	AK222935 [ ENTREZ ]
Genbank	AK222939 [ ENTREZ ]
Genbank	AK225130 [ ENTREZ ]
Genbank	AK310045 [ ENTREZ ]
Genbank	BC003151 [ ENTREZ ]
RefSeq	NM_005997 [ SRS ]    NM_005997 [ ENTREZ ]
RefSeq	AC_000044 [ SRS ]    AC_000044 [ ENTREZ ]
RefSeq	AC_000133 [ SRS ]    AC_000133 [ ENTREZ ]
RefSeq	NC_000001 [ SRS ]    NC_000001 [ ENTREZ ]
RefSeq	NT_004487 [ SRS ]    NT_004487 [ ENTREZ ]
RefSeq	NW_001838529 [ SRS ]    NW_001838529 [ ENTREZ ]
RefSeq	NW_925683 [ SRS ]    NW_925683 [ ENTREZ ]
AceView	VPS72 AceView - NCBI
Unigene	Hs.2430 [ SRS ]    Hs.2430 [ NCBI ]     HS2430 [ spliceNest ]
Fast-db	17263 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q15906 [ SRS]    Q15906 [ EXPASY ]     Q15906 [ INTERPRO ]     Q15906 [ UNIPROT ]
Interpro	IPR008895 YL1 [ SRS ]    IPR008895 YL1 [ EBI ]
Interpro	IPR013272 YL1_C [ SRS ]    IPR013272 YL1_C [ EBI ]
CluSTr	Q15906
Pfam	PF05764 YL1 [ SRS ]    PF05764 YL1 [ Sanger ]    pfam05764 [ NCBI-CDD ]
Pfam	PF08265 YL1_C [ SRS ]    PF08265 YL1_C [ Sanger ]    pfam08265 [ NCBI-CDD ]
Blocks	Q15906
HPRD	02791
	Protein Interaction databases
DIP	Q15906
IntAct	Q15906
	Polymorphism : SNP, mutations, diseases
OMIM	600607    [ map ]
GENECLINICS	600607
SNP	VPS72 [dbSNP-NCBI]
SNP	NM_005997 [SNP-NCI]
SNP	VPS72 [GeneSNPs - Utah]  VPS72] [HGBASE - SRS]
HAPMAP	VPS72 [HAPMAP]
HGMD	VPS72
	General knowledge
Family Browser	VPS72 [UCSC Family Browser]
SOURCE	NM_005997
SMD	Hs.2430
SAGE	Hs.2430
GO	negative regulation of transcription from RNA polymerase II promoter [Amigo]  negative regulation of transcription from RNA polymerase II promoter
GO	transcription factor activity [Amigo]  transcription factor activity
GO	RNA polymerase II transcription factor activity [Amigo]  RNA polymerase II transcription factor activity
GO	nucleus [Amigo]  nucleus
GO	regulation of transcription, DNA-dependent [Amigo]  regulation of transcription, DNA-dependent
GO	chromatin modification [Amigo]  chromatin modification
PubGene	VPS72
TreeFam	VPS72
CTD	6944 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	VPS72 Related clones (RZPD - Berlin)
	PubMed
PubMed	9 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 18 15:07:27 2008