YAF2 (YY1 associated factor 2)

Identity

Other names	MGC41856
HGNC	YAF2
Location	12q12
Location_base_pair	Starts at 40837174 and ends at 40918317 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	YAF2   17363
Entrez_Gene	YAF2  10138  YY1 associated factor 2
	Cards
GeneCards	YAF2
Ensembl	ENSG00000015153 [Gene_View]  YAF2 [Vega]
Genatlas	YAF2
	Genomic and cartography
GoldenPath	YAF2  -  12q12   chr12:40837174-40918317 -  12q12   [Description]    (hg18-March_2006)
Ensembl	YAF2 - 12q12 [CytoView]
NCBI	Mapview
OMIM	607534 Disease map [OMIM]
HomoloGene	YAF2
	Gene and transcription
Genbank	AI654632 [ ENTREZ ]
Genbank	AK127531 [ ENTREZ ]
Genbank	AK291355 [ ENTREZ ]
Genbank	BC037777 [ ENTREZ ]
Genbank	EU446625 [ ENTREZ ]
RefSeq	NM_005748 [ SRS ]    NM_005748 [ ENTREZ ]
RefSeq	AC_000055 [ SRS ]    AC_000055 [ ENTREZ ]
RefSeq	AC_000144 [ SRS ]    AC_000144 [ ENTREZ ]
RefSeq	NC_000012 [ SRS ]    NC_000012 [ ENTREZ ]
RefSeq	NT_029419 [ SRS ]    NT_029419 [ ENTREZ ]
RefSeq	NW_001838057 [ SRS ]    NW_001838057 [ ENTREZ ]
RefSeq	NW_925351 [ SRS ]    NW_925351 [ ENTREZ ]
CCDS	YAF2 CCDS - NCBI
AceView	YAF2 AceView - NCBI
Unigene	Hs.708084 [ SRS ]    Hs.708084 [ NCBI ]
Fast-db	5428 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q8IY57 [ SRS]    Q8IY57 [ EXPASY ]     Q8IY57 [ INTERPRO ]     Q8IY57 [ UNIPROT ] Q8IY57 [ VarSplice FASTA ]
Prosite	PS01358 ZF_RANBP2_1 [ SRS ]    PS01358 ZF_RANBP2_1 [ Expasy ]
Prosite	PS50199 ZF_RANBP2_2 [ SRS ]    PS50199 ZF_RANBP2_2 [ Expasy ]
Interpro	IPR001876 Znf_RanBP2 [ SRS ]    IPR001876 Znf_RanBP2 [ EBI ]
CluSTr	Q8IY57
Pfam	PF00641 zf-RanBP [ SRS ]    PF00641 zf-RanBP [ Sanger ]    pfam00641 [ NCBI-CDD ]
Smart	SM00547 ZnF_RBZ [EMBL]
Blocks	Q8IY57
PDB	2D9G [ SRS ]    2D9G [ PdbSum ],   2D9G [ IMB ]   2D9G [ RSDB ]
HPRD	09606
	Protein Interaction databases
DIP	Q8IY57
IntAct	Q8IY57
	Polymorphism : SNP, mutations, diseases
OMIM	607534    [ map ]
GENETests	607534
SNP	YAF2 [dbSNP-NCBI]
SNP	NM_005748 [SNP-NCI]
SNP	YAF2 [GeneSNPs - Utah]  YAF2] [HGBASE - SRS]
HAPMAP	YAF2 [HAPMAP]
HGMD	YAF2
Genetic Association	YAF2
CDC HuGE	YAF2
	General knowledge
Family Browser	YAF2 [UCSC Family Browser]
SOURCE	NM_005748
SMD	Hs.708084
SAGE	Hs.708084
GO	transcription coactivator activity [Amigo]  transcription coactivator activity
GO	transcription corepressor activity [Amigo]  transcription corepressor activity
GO	protein binding [Amigo]  protein binding
GO	intracellular [Amigo]  intracellular
GO	nucleus [Amigo]  nucleus
GO	regulation of transcription, DNA-dependent [Amigo]  regulation of transcription, DNA-dependent
GO	zinc ion binding [Amigo]  zinc ion binding
GO	negative regulation of transcription [Amigo]  negative regulation of transcription
GO	positive regulation of transcription [Amigo]  positive regulation of transcription
GO	metal ion binding [Amigo]  metal ion binding
PubGene	YAF2
TreeFam	YAF2
CTD	10138 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	YAF2 Related clones (RZPD - Berlin)
	PubMed
PubMed	8 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Dec 6 17:15:08 2008