YBX2 (Y box binding protein 2)

Identity

Other names	CONTRIN
	CSDA3
	DBPC
	MGC45104
	MSY2
HGNC	YBX2
Location	17p13.1
Location_base_pair	Starts at 7132295 and ends at 7138600 bp from pter (hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	YBX2   17948
Entrez_Gene	YBX2  51087  Y box binding protein 2
	Cards
GeneCards	YBX2
Ensembl	YBX2 [Search_View]   ENSG00000006047 [Gene_View]
Genatlas	YBX2
GeneLynx	YBX2
eGenome	YBX2
euGene	51087
	Genomic and cartography
GoldenPath	YBX2  -  17p13.1   chr17:7132295-7138600 -  17p13.1   [Description]    (hg18-March_2006)
Ensembl	YBX2 - 17p13.1 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	YBX2
	Gene and transcription
Genbank	AB208818 [ ENTREZ ]
Genbank	AF096834 [ ENTREZ ]
Genbank	AI805280 [ ENTREZ ]
Genbank	AK092747 [ ENTREZ ]
Genbank	AK315035 [ ENTREZ ]
RefSeq	NM_015982 [ SRS ]    NM_015982 [ ENTREZ ]
RefSeq	AC_000060 [ SRS ]    AC_000060 [ ENTREZ ]
RefSeq	AC_000149 [ SRS ]    AC_000149 [ ENTREZ ]
RefSeq	NC_000017 [ SRS ]    NC_000017 [ ENTREZ ]
RefSeq	NT_010718 [ SRS ]    NT_010718 [ ENTREZ ]
RefSeq	NW_001838403 [ SRS ]    NW_001838403 [ ENTREZ ]
RefSeq	NW_926584 [ SRS ]    NW_926584 [ ENTREZ ]
AceView	YBX2 AceView - NCBI
Unigene	Hs.567494 [ SRS ]    Hs.567494 [ NCBI ]     HS567494 [ spliceNest ]
Fast-db	2838 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q59HE1 [ SRS]    Q59HE1 [ EXPASY ]     Q59HE1 [ INTERPRO ]     Q59HE1 [ UNIPROT ]
Interpro	IPR002059 CSP_DNA_bd [ SRS ]    IPR002059 CSP_DNA_bd [ EBI ]
CluSTr	Q59HE1
Pfam	PF00313 CSD [ SRS ]    PF00313 CSD [ Sanger ]    pfam00313 [ NCBI-CDD ]
Prodom	PD000621 Cold_shock[INRA-Toulouse]
Prodom	Q59HE1 Q59HE1_HUMAN [ Domain structure ]   Q59HE1 Q59HE1_HUMAN  [ sequences sharing at least 1 domain ]
Blocks	Q59HE1
HPRD	18311
	Protein Interaction databases
DIP	Q59HE1
IntAct	Q59HE1
	Polymorphism : SNP, mutations, diseases
OMIM	611447    [ map ]
GENECLINICS	611447
SNP	YBX2 [dbSNP-NCBI]
SNP	NM_015982 [SNP-NCI]
SNP	YBX2 [GeneSNPs - Utah]  YBX2] [HGBASE - SRS]
HAPMAP	YBX2 [HAPMAP]
HGMD	YBX2
	General knowledge
Family Browser	YBX2 [UCSC Family Browser]
SOURCE	NM_015982
SMD	Hs.567494
SAGE	Hs.567494
GO	DNA binding [Amigo]  DNA binding
GO	RNA binding [Amigo]  RNA binding
GO	nucleus [Amigo]  nucleus
GO	cytoplasm [Amigo]  cytoplasm
GO	regulation of transcription, DNA-dependent [Amigo]  regulation of transcription, DNA-dependent
GO	transcription from RNA polymerase II promoter [Amigo]  transcription from RNA polymerase II promoter
GO	spermatogenesis [Amigo]  spermatogenesis
GO	translational attenuation [Amigo]  translational attenuation
PubGene	YBX2
TreeFam	YBX2
CTD	51087 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	YBX2 Related clones (RZPD - Berlin)
	PubMed
PubMed	10 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 11 13:38:21 2008