YKT6 (YKT6 v-SNARE homolog (S. cerevisiae))

Identity

Other names	-
HGNC	YKT6
Location	7p13
Location_base_pair	Starts at 44207103 and ends at 44220418 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

External links

	Nomenclature
HGNC	YKT6   16959
Entrez_Gene	YKT6  10652  YKT6 v-SNARE homolog (S. cerevisiae)
	Cards
GeneCards	YKT6
Ensembl	YKT6 [Search_View]   ENSG00000106636 [Gene_View]
Genatlas	YKT6
GeneLynx	YKT6
eGenome	YKT6
euGene	10652
	Genomic and cartography
GoldenPath	YKT6  -  7p13   chr7:44207103-44220418 +  7p13   [Description]    (hg18-March_2006)
Ensembl	YKT6 - 7p13 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	YKT6
	Gene and transcription
Genbank	AF091079 [ ENTREZ ]
Genbank	AK075018 [ ENTREZ ]
Genbank	AK097209 [ ENTREZ ]
Genbank	AK223488 [ ENTREZ ]
Genbank	AK312622 [ ENTREZ ]
RefSeq	NM_006555 [ SRS ]    NM_006555 [ ENTREZ ]
RefSeq	AC_000050 [ SRS ]    AC_000050 [ ENTREZ ]
RefSeq	AC_000068 [ SRS ]    AC_000068 [ ENTREZ ]
RefSeq	AC_000139 [ SRS ]    AC_000139 [ ENTREZ ]
RefSeq	NC_000007 [ SRS ]    NC_000007 [ ENTREZ ]
RefSeq	NT_007819 [ SRS ]    NT_007819 [ ENTREZ ]
RefSeq	NT_079592 [ SRS ]    NT_079592 [ ENTREZ ]
RefSeq	NW_001839004 [ SRS ]    NW_001839004 [ ENTREZ ]
RefSeq	NW_923273 [ SRS ]    NW_923273 [ ENTREZ ]
AceView	YKT6 AceView - NCBI
Unigene	Hs.520794 [ SRS ]    Hs.520794 [ NCBI ]     HS520794 [ spliceNest ]
Fast-db	4524 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	O15498 [ SRS]    O15498 [ EXPASY ]     O15498 [ INTERPRO ]     O15498 [ UNIPROT ]
Prosite	PS50859 LONGIN [ SRS ]    PS50859 LONGIN [ Expasy ]
Prosite	PS00417 SYNAPTOBREVIN [ SRS ]    PS00417 SYNAPTOBREVIN [ Expasy ]
Prosite	PS50892 V_SNARE [ SRS ]    PS50892 V_SNARE [ Expasy ]
Interpro	IPR010908 Longin [ SRS ]    IPR010908 Longin [ EBI ]
Interpro	IPR001388 Synaptobrevin [ SRS ]    IPR001388 Synaptobrevin [ EBI ]
CluSTr	O15498
Pfam	PF00957 Synaptobrevin [ SRS ]    PF00957 Synaptobrevin [ Sanger ]    pfam00957 [ NCBI-CDD ]
Prodom	PD001229 Synaptobrevin[INRA-Toulouse]
Prodom	O15498 YKT6_HUMAN [ Domain structure ]   O15498 YKT6_HUMAN  [ sequences sharing at least 1 domain ]
Blocks	O15498
HPRD	16205
	Protein Interaction databases
DIP	O15498
IntAct	O15498
	Polymorphism : SNP, mutations, diseases
OMIM	606209    [ map ]
GENECLINICS	606209
SNP	YKT6 [dbSNP-NCBI]
SNP	NM_006555 [SNP-NCI]
SNP	YKT6 [GeneSNPs - Utah]  YKT6] [HGBASE - SRS]
HAPMAP	YKT6 [HAPMAP]
HGMD	YKT6
	General knowledge
Family Browser	YKT6 [UCSC Family Browser]
SOURCE	NM_006555
SMD	Hs.520794
SAGE	Hs.520794
GO	Golgi membrane [Amigo]  Golgi membrane
GO	SNAP receptor activity [Amigo]  SNAP receptor activity
GO	cytoplasm [Amigo]  cytoplasm
GO	endosome [Amigo]  endosome
GO	endoplasmic reticulum [Amigo]  endoplasmic reticulum
GO	Golgi apparatus [Amigo]  Golgi apparatus
GO	integral to plasma membrane [Amigo]  integral to plasma membrane
GO	ER to Golgi vesicle-mediated transport [Amigo]  ER to Golgi vesicle-mediated transport
GO	vesicle targeting [Amigo]  vesicle targeting
GO	vesicle docking during exocytosis [Amigo]  vesicle docking during exocytosis
GO	protein transport [Amigo]  protein transport
GO	membrane [Amigo]  membrane
GO	transferase activity [Amigo]  transferase activity
GO	protein-cysteine S-palmitoleyltransferase activity [Amigo]  protein-cysteine S-palmitoleyltransferase activity
GO	cytoplasmic vesicle membrane [Amigo]  cytoplasmic vesicle membrane
GO	SNARE complex [Amigo]  SNARE complex
GO	SNARE complex [Amigo]  SNARE complex
GO	cytoplasmic vesicle [Amigo]  cytoplasmic vesicle
GO	retrograde transport, endosome to Golgi [Amigo]  retrograde transport, endosome to Golgi
KEGG	SNARE interactions in vesicular transport
PubGene	YKT6
TreeFam	YKT6
CTD	10652 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	YKT6 Related clones (RZPD - Berlin)
	PubMed
PubMed	19 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 18 15:08:02 2008