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ZNF215 (zinc finger protein 215)

Identity

Other namesBAZ2
ZKSCAN11
HGNC (Hugo) ZNF215
Location 11p15.4
Location_base_pair Starts at 6904230 and ends at 6935854 bp from pter ( according to hg18-March_2006)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)ZNF215   13007
Entrez_Gene (NCBI)ZNF215  7762  zinc finger protein 215
Cards
GeneCards (Weizmann)ZNF215
Ensembl (Hinxton)ENSG00000149054 [Gene_View]  ZNF215 [Vega]
AceView (NCBI)ZNF215
Genatlas (Paris)ZNF215
euGene (Indiana)7762
SOURCE (Stanford)NM_013250
Gene Expression (Array Express) ENSG00000149054
Genomic and cartography
GoldenPath (UCSC)ZNF215  -  11p15.4   chr11:6904230-6935854 +  11p15.4   [Description]    (hg18-March_2006)
EnsemblZNF215 - 11p15.4 [CytoView]
Mapping of homologs : NCBIZNF215 [Mapview]
OMIM605016   
Gene and transcription
Gene : Genbank (Entrez)AF056618 AK298365 BC014538 BX117423 CN483744
Reference sequence (RefSeq transcript) :SRSNM_013250
Reference transcript : EntrezNM_013250
RefSeq genomic : SRSAC_000054 AC_000143 NC_000011 NT_009237 NW_001838021 NW_925006
RefSeq genomic : EntrezAC_000054 AC_000143 NC_000011 NT_009237 NW_001838021 NW_925006
Consensus coding sequences : CCDS NCBIZNF215
Cluster EST : UnigeneHs.523457 [ SRS ] Hs.523457 [ NCBI ]
Alternative Splicing : Fast-db (Paris)2213
Protein : pattern, domain, 3D structure
Protein : UniProt/SwissProtQ9UL58 (SRS) Q9UL58 (Expasy) Q9UL58 (Uniprot)
With graphics : InterProQ9UL58
Splice isoforms : VarSplice FASTAQ9UL58(VarSplice FASTA)
Domaine pattern : Prosite (SRS)KRAB (PS50805)    SCAN_BOX (PS50804)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domain pattern : Prosite (Expaxy)KRAB (PS50805)    SCAN_BOX (PS50804)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (SRS)Krueppel-associated_box    Treg_SCAN    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domains : Interpro (EBI)Krueppel-associated_box    Treg_SCAN    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Related proteins : CluSTrQ9UL58
Domain families : Pfam SRSKRAB (PF01352)    SCAN (PF02023)    zf-C2H2 (PF00096)   
Domain families : Pfam SangerKRAB (PF01352)    SCAN (PF02023)    zf-C2H2 (PF00096)   
Domain families : Pfam NCBIpfam01352    pfam02023    pfam00096   
Domain families : Smart EMBLKRAB (SM00349)  SCAN (SM00431)  ZnF_C2H2 (SM00355)  
Blocks (Seattle)Q9UL58
Crystal structure of protein : PDB SRS
Crystal structure of protein : PDBSum
Crystal structure of protein : IMB
Crystal structure of protein : PDB RSDB
HPRD05425
Protein Interaction databases
DIP (DOE-UCLA)Q9UL58
IntAct (EBI)Q9UL58
Polymorphism : SNP, mutations, diseases
Single Nucleotide Polymorphism (SNP) : dbSNP NCBIZNF215
SNP : GeneSNP UtahZNF215
SNP : HGBaseZNF215
Genetic variants : HAPMAPZNF215
Somatic Mutations in Cancer : COSMICZNF215 
Mutations and Diseases : HGMDZNF215
Hereditary diseases : OMIM605016   
Hereditary diseases : GENETests605016   
Diseases : Genetic AssociationZNF215
General knowledge
Homologs : HomoloGeneZNF215
Homology/Alignments : Family Browser UCSCZNF215
Phylogenetic Trees/Animal Genes : TreeFamZNF215
Chemical/Protein Interactions : CTD7762
Keywords Ontology : AmiGOtranscription factor activity  intracellular  nucleus  regulation of transcription, DNA-dependent  zinc ion binding  metal ion binding  
Keywords Ontology : EGO-EBItranscription factor activity  intracellular  nucleus  regulation of transcription, DNA-dependent  zinc ion binding  metal ion binding  
Pathways : BIOCARTA
Pathways : KEGG
Other databases
Probes
Probes : ImagenesZNF215 Related clones (RZPD - Berlin)
Literature
PubMed3 Pubmed reference(s) in Entrez
PubGeneZNF215
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated03-2009Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Feb 27 10:41:19 CET 2010
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