ZNRD1 (zinc ribbon domain containing 1)

Identity

Other names	HTEX-6
	MGC13376
	Rpa12
	TEX6
	hZR14
	tctex-6
HGNC	ZNRD1
Location	6p21.3
Location_base_pair	Starts at 30137015 and ends at 30140665 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	ZNRD1   13182
Entrez_Gene	ZNRD1  30834  zinc ribbon domain containing 1
	Cards
GeneCards	ZNRD1
Ensembl	ZNRD1 [Search_View]   ENSG00000066379 [Gene_View]
Genatlas	ZNRD1
GeneLynx	ZNRD1
eGenome	ZNRD1
euGene	30834
	Genomic and cartography
GoldenPath	ZNRD1  -  6p21.3   chr6:30137015-30140665 +  6p21.33   [Description]    (hg18-March_2006)
Ensembl	ZNRD1 - 6p21.33 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	ZNRD1
	Gene and transcription
Genbank	AF024616 [ ENTREZ ]
Genbank	AF024617 [ ENTREZ ]
Genbank	AF230337 [ ENTREZ ]
Genbank	AF238320 [ ENTREZ ]
Genbank	AF238321 [ ENTREZ ]
RefSeq	NM_014596 [ SRS ]    NM_014596 [ ENTREZ ]
RefSeq	NM_170783 [ SRS ]    NM_170783 [ ENTREZ ]
RefSeq	AC_000049 [ SRS ]    AC_000049 [ ENTREZ ]
RefSeq	AC_000138 [ SRS ]    AC_000138 [ ENTREZ ]
RefSeq	NC_000006 [ SRS ]    NC_000006 [ ENTREZ ]
RefSeq	NT_007592 [ SRS ]    NT_007592 [ ENTREZ ]
RefSeq	NT_113891 [ SRS ]    NT_113891 [ ENTREZ ]
RefSeq	NT_113893 [ SRS ]    NT_113893 [ ENTREZ ]
RefSeq	NW_001838980 [ SRS ]    NW_001838980 [ ENTREZ ]
RefSeq	NW_923073 [ SRS ]    NW_923073 [ ENTREZ ]
AceView	ZNRD1 AceView - NCBI
Unigene	Hs.57813 [ SRS ]    Hs.57813 [ NCBI ]     HS57813 [ spliceNest ]
Fast-db	5329 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q2L6J2 [ SRS]    Q2L6J2 [ EXPASY ]     Q2L6J2 [ INTERPRO ]     Q2L6J2 [ UNIPROT ]
Prosite	PS01030 RNA_POL_M_15KD [ SRS ]    PS01030 RNA_POL_M_15KD [ Expasy ]
Prosite	PS00466 ZF_TFIIS_1 [ SRS ]    PS00466 ZF_TFIIS_1 [ Expasy ]
Prosite	PS51133 ZF_TFIIS_2 [ SRS ]    PS51133 ZF_TFIIS_2 [ Expasy ]
Interpro	IPR001529 DNA-dir_RNA_pol_M/15kDsu [ SRS ]    IPR001529 DNA-dir_RNA_pol_M/15kDsu [ EBI ]
Interpro	IPR001222 Znf_TFIIS [ SRS ]    IPR001222 Znf_TFIIS [ EBI ]
CluSTr	Q2L6J2
Pfam	PF01096 TFIIS_C [ SRS ]    PF01096 TFIIS_C [ Sanger ]    pfam01096 [ NCBI-CDD ]
Smart	SM00440 ZnF_C2C2 [EMBL]
Blocks	Q2L6J2
HPRD	09601
	Protein Interaction databases
DIP	Q2L6J2
IntAct	Q2L6J2
	Polymorphism : SNP, mutations, diseases
OMIM	607525    [ map ]
GENECLINICS	607525
SNP	ZNRD1 [dbSNP-NCBI]
SNP	NM_014596 [SNP-NCI]
SNP	NM_170783 [SNP-NCI]
SNP	ZNRD1 [GeneSNPs - Utah]  ZNRD1] [HGBASE - SRS]
HAPMAP	ZNRD1 [HAPMAP]
HGMD	ZNRD1
	General knowledge
Family Browser	ZNRD1 [UCSC Family Browser]
SOURCE	NM_014596
SOURCE	NM_170783
SMD	Hs.57813
SAGE	Hs.57813
GO	osteoblast differentiation [Amigo]  osteoblast differentiation
GO	DNA binding [Amigo]  DNA binding
GO	DNA-directed RNA polymerase activity [Amigo]  DNA-directed RNA polymerase activity
GO	GABA-B receptor activity [Amigo]  GABA-B receptor activity
GO	nucleus [Amigo]  nucleus
GO	zinc ion binding [Amigo]  zinc ion binding
GO	transcription regulator activity [Amigo]  transcription regulator activity
GO	regulation of transcription [Amigo]  regulation of transcription
GO	metal ion binding [Amigo]  metal ion binding
KEGG	Purine metabolism
KEGG	Pyrimidine metabolism
KEGG	RNA polymerase
PubGene	ZNRD1
TreeFam	ZNRD1
CTD	30834 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	ZNRD1 Related clones (RZPD - Berlin)
	PubMed
PubMed	16 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Tue Oct 14 21:02:21 2008