ZRSR1 (zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 1)

Identity

Other names	MGC142159
	U2AF1-RS1
	U2AF1L1
	U2AF1P
	U2AF1RS1
	U2AFBPL
HGNC	ZRSR1
Location	5q22
Location_base_pair	Starts at 112255207 and ends at 112256730 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

External links

	Nomenclature
HGNC	ZRSR1   12456
Entrez_Gene	ZRSR1  7310  zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 1
	Cards
GeneCards	ZRSR1
Ensembl	ENSG00000160201 [Gene_View]  ZRSR1 [Vega]
Genatlas	ZRSR1
	Genomic and cartography
GoldenPath	ZRSR1  -  5q22   chr5:112255207-112256730 +  5q22.2   [Description]    (hg18-March_2006)
Ensembl	ZRSR1 - 5q22.2 [CytoView]
NCBI	Mapview
OMIM	601079 Disease map [OMIM]
HomoloGene	ZRSR1
	Gene and transcription
Genbank	BC104811 [ ENTREZ ]
Genbank	BC113599 [ ENTREZ ]
Genbank	D49676 [ ENTREZ ]
RefSeq	AC_000048 [ SRS ]    AC_000048 [ ENTREZ ]
RefSeq	AC_000137 [ SRS ]    AC_000137 [ ENTREZ ]
RefSeq	NC_000005 [ SRS ]    NC_000005 [ ENTREZ ]
RefSeq	NG_005419 [ SRS ]    NG_005419 [ ENTREZ ]
RefSeq	NT_034772 [ SRS ]    NT_034772 [ ENTREZ ]
RefSeq	NW_001838952 [ SRS ]    NW_001838952 [ ENTREZ ]
RefSeq	NW_922751 [ SRS ]    NW_922751 [ ENTREZ ]
CCDS	ZRSR1 CCDS - NCBI
AceView	ZRSR1 AceView - NCBI
Unigene	Hs.707997 [ SRS ]    Hs.707997 [ NCBI ]
	Protein : pattern, domain, 3D structure
SwissProt	Q15695 [ SRS]    Q15695 [ EXPASY ]     Q15695 [ INTERPRO ]     Q15695 [ UNIPROT ] Q15695 [ VarSplice FASTA ]
Prosite	PS50102 RRM [ SRS ]    PS50102 RRM [ Expasy ]
Prosite	PS50103 ZF_C3H1 [ SRS ]    PS50103 ZF_C3H1 [ Expasy ]
Interpro	IPR012677 a_b_plait_nuc_bd [ SRS ]    IPR012677 a_b_plait_nuc_bd [ EBI ]
Interpro	IPR000504 RRM_RNP1 [ SRS ]    IPR000504 RRM_RNP1 [ EBI ]
Interpro	IPR009145 U2_small [ SRS ]    IPR009145 U2_small [ EBI ]
Interpro	IPR000571 Znf_CCCH [ SRS ]    IPR000571 Znf_CCCH [ EBI ]
CluSTr	Q15695
Pfam	PF00076 RRM_1 [ SRS ]    PF00076 RRM_1 [ Sanger ]    pfam00076 [ NCBI-CDD ]
Pfam	PF00642 zf-CCCH [ SRS ]    PF00642 zf-CCCH [ Sanger ]    pfam00642 [ NCBI-CDD ]
Smart	SM00360 RRM [EMBL]
Smart	SM00356 ZnF_C3H1 [EMBL]
Blocks	Q15695
HPRD	03049
	Protein Interaction databases
DIP	Q15695
IntAct	Q15695
	Polymorphism : SNP, mutations, diseases
OMIM	601079    [ map ]
GENETests	601079
SNP	ZRSR1 [dbSNP-NCBI]
SNP	ZRSR1 [GeneSNPs - Utah]  ZRSR1] [HGBASE - SRS]
HAPMAP	ZRSR1 [HAPMAP]
HGMD	ZRSR1
Genetic Association	ZRSR1
CDC HuGE	ZRSR1
	General knowledge
Family Browser	ZRSR1 [UCSC Family Browser]
SMD	Hs.707997
SAGE	Hs.707997
GO	nucleotide binding [Amigo]  nucleotide binding
GO	RNA binding [Amigo]  RNA binding
GO	nucleus [Amigo]  nucleus
GO	biological_process [Amigo]  biological_process
GO	zinc ion binding [Amigo]  zinc ion binding
GO	ribonucleoprotein complex [Amigo]  ribonucleoprotein complex
GO	metal ion binding [Amigo]  metal ion binding
PubGene	ZRSR1
TreeFam	ZRSR1
CTD	7310 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	ZRSR1 Related clones (RZPD - Berlin)
	PubMed
PubMed	9 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Dec 6 17:15:36 2008