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HYAL1 (hyaluronoglucosaminidase 1)

Identity

Other namesEC 3.2.1.35
HYAL-1
NT6
LUCA1
LUCA-1
FUS2
Hyaluronidase-1 precursor
Hyaluronoglucosaminidase-1
Hs.75619
MGC45987
HGNC HYAL1
Location 3p21.3
Location_base_pair Starts at 50312325 and ends at 50316008 bp from pter (hg18-Mar_2006).
Local_order The gene of Hyal1 is tightly clustered with HYAL-2 and HYAL-3. The gene for Hyal-2, HYAL2, the earliest known lysosomal hyaluronidase, resides immediately centromeric to HYAL1.
 
Note The HYAL1 gene was identified as identical with LUCA-1, a candidate tumour suppressor gene, especially for tobacco-related cancers.

DNA/RNA

Description The HYAL1 gene contains three exons and spans 12,492 bases (start: 50,312,324 bp to end 50,324,816 from 13pter) oriented at the minus strand.
Transcription Eight alternatively spliced transcript variants of this gene encoding six distinct isoforms have been described. The longest transcript has a length of 2,518 bps, however it is not translated to protein, since, by retaining intron 1 (occurring within exon 1), it has a number of stop codons. The longest transcript that produces active HYAL1 has a length of 2075 bps.
Pseudogene PHYAL1

Protein

 
Description Size: 435 amino acids; Molecular mass: 48368 Da. The enzyme belongs to the group of carbohydrate-active enzymes (CASy), termed glycosyl hydrolase 56 family.
Expression HYAL1 is highly expressed in liver, kidney and heart and weakly expressed in lung, placenta and skeletal muscle. No expression is detected in adult brain. Isoform 1 is expressed only in bladder and prostate cancer cells, G2/G3 bladder tumor tissues and lymph node specimens showing tumor invasive tumors cells. Isoform 3, isoform 4, isoform 5 and isoform 6 are expressed in normal bladder and bladder tumor tissues.
HYAL1 expression has been described in squamous cell carcinoma, in small cell lung cancer and glioma lines.
Localisation It is a secreted enzyme found in plasma and it is also present in lysosomes.
Function It is a hydrolytic enzyme (endo-beta-acetyl-D-hexosaminidase) with optimum pH about 3.7, acting on hyaluronan, chondroitin and chondroitin sulphate. It possesses also transglycosidase activity using hyaluronan and chondroitin sulphate or chondroitin as substrates. This reaction is not well understood, and the precise enzymatic mechanism is not known.
Homology The enzyme possesses 70-80 % homology to orthologue hyaluronidases, 40% homology to paralogue hyaluronidases of the human and high homology with HYAL1 of other species.

Mutations

Somatic There are not extended reports regarding mutations of HYAL1 gene. The patient with hyaluronidase deficiency was a compound heterozygote for two mutations in the HYAL1 gene: a 1412G-A mutation that introduced a nonconservative amino acid substitution (glu268 to lys) in a putative active site residue, and a complex intragenic rearrangement, 1361del37ins14, that resulted in a premature termination codon. In addition, the mutated HYAL1 gene has a markedly different expression pattern than the normal one.

Implicated in

Entity Mucopolysaccharidosis type IX (MPS9).
Note Defects in HYAL1 are the cause of mucopolysaccharidosis type IX, also called hyaluronidase deficiency.
Disease The clinical features are periarticular soft tissue masses, mild short stature and acetabular erosions, absence of neurological or visceral involvement and high hyaluronan concentration in the serum.
  
Entity Cancer
Note HYAL1 is inactivated in most lung cancers in a conventional manner, by loss of heterozygosity or by homozygous deletion, at the DNA level. It is also inactivated in many head and neck carcinomas that are tobacco-related by aberrant splicing of the mRNA, so that only the nontranslatable form is transcribed. In addition, the expression of an alternative spliced isoform resulting in active enzyme may negatively regulate bladder tumor growth, infiltration, and angiogenesis. On the other hand, HYAL1 can function as oncogene in many cancers of the prostate and urinary tract and seems to play important role in squamous cell laryngeal carcinoma.
  

External links

Nomenclature
HGNCHYAL1   5320
Entrez_GeneHYAL1  3373  hyaluronoglucosaminidase 1
Cards
AtlasHYAL1ID40903ch3p21
GeneCardsHYAL1
EnsemblHYAL1 [Search_View]   ENSG00000114378 [Gene_View]
GenatlasHYAL1
GeneLynxHYAL1
eGenomeHYAL1
euGene3373
Genomic and cartography
GoldenPathHYAL1  -  3p21.3   chr3:50312325-50316008 -  3p21.3-p21.2   [Description]    (hg18-Mar_2006)
EnsemblHYAL1 - 3p21.3-p21.2 [CytoView]
NCBIMapview
OMIMDisease map [OMIM]
HomoloGeneHYAL1
Gene and transcription
GenbankAF118821 [ ENTREZ ]
GenbankAF173154 [ ENTREZ ]
GenbankAF502904 [ ENTREZ ]
GenbankAF502905 [ ENTREZ ]
GenbankAF502906 [ ENTREZ ]
RefSeqNM_007312 [ SRS ]    NM_007312 [ ENTREZ ]
RefSeqNM_033159 [ SRS ]    NM_033159 [ ENTREZ ]
RefSeqNM_153281 [ SRS ]    NM_153281 [ ENTREZ ]
RefSeqNM_153282 [ SRS ]    NM_153282 [ ENTREZ ]
RefSeqNM_153283 [ SRS ]    NM_153283 [ ENTREZ ]
RefSeqNM_153285 [ SRS ]    NM_153285 [ ENTREZ ]
RefSeqAC_000046 [ SRS ]    AC_000046 [ ENTREZ ]
RefSeqAC_000135 [ SRS ]    AC_000135 [ ENTREZ ]
RefSeqNC_000003 [ SRS ]    NC_000003 [ ENTREZ ]
RefSeqNT_022517 [ SRS ]    NT_022517 [ ENTREZ ]
RefSeqNW_001838877 [ SRS ]    NW_001838877 [ ENTREZ ]
RefSeqNW_921651 [ SRS ]    NW_921651 [ ENTREZ ]
AceViewHYAL1 AceView - NCBI
UnigeneHs.75619 [ SRS ]    Hs.75619 [ NCBI ]     HS75619 [ spliceNest ]
Fast-db7141 (alternative variants)
Protein : pattern, domain, 3D structure
SwissProtQ12794 [ SRS]    Q12794 [ EXPASY ]     Q12794 [ INTERPRO ]     Q12794 [ UNIPROT ]
PrositePS00022 EGF_1 [ SRS ]    PS00022 EGF_1 [ Expasy ]
PrositePS01186 EGF_2 [ SRS ]    PS01186 EGF_2 [ Expasy ]
PrositePS50026 EGF_3 [ SRS ]    PS50026 EGF_3 [ Expasy ]
InterproIPR013785 Aldolase_TIM [ SRS ]    IPR013785 Aldolase_TIM [ EBI ]
InterproIPR006210 EGF [ SRS ]    IPR006210 EGF [ EBI ]
InterproIPR000742 EGF_3 [ SRS ]    IPR000742 EGF_3 [ EBI ]
InterproIPR013032 EGF_like_reg_CS [ SRS ]    IPR013032 EGF_like_reg_CS [ EBI ]
InterproIPR001968 Glyco_hydro_56 [ SRS ]    IPR001968 Glyco_hydro_56 [ EBI ]
InterproIPR017430 Glyco_hydro_56_Hyaluronidase [ SRS ]    IPR017430 Glyco_hydro_56_Hyaluronidase [ EBI ]
CluSTrQ12794
PfamPF01630 Glyco_hydro_56 [ SRS ]    PF01630 Glyco_hydro_56 [ Sanger ]    pfam01630 [ NCBI-CDD ]
SmartSM00181 EGF [EMBL]
ProdomPD003549 Glyco_hydro_56[INRA-Toulouse]
ProdomQ12794 HYAL1_HUMAN [ Domain structure ]   Q12794 HYAL1_HUMAN  [ sequences sharing at least 1 domain ]
BlocksQ12794
PDB2PE4 [ SRS ]    2PE4 [ PdbSum ],   2PE4 [ IMB ]   2PE4 [ RSDB ]
HPRD06146
Protein Interaction databases
DIPQ12794
IntActQ12794
Polymorphism : SNP, mutations, diseases
OMIM601492;607071    [ map ]   
GENECLINICS601492;607071
SNPHYAL1 [dbSNP-NCBI]  
SNPNM_007312 [SNP-NCI]  
SNPNM_033159 [SNP-NCI]  
SNPNM_153281 [SNP-NCI]  
SNPNM_153282 [SNP-NCI]  
SNPNM_153283 [SNP-NCI]  
SNPNM_153285 [SNP-NCI]  
SNPHYAL1 [GeneSNPs - Utah]  HYAL1] [HGBASE - SRS]
HAPMAPHYAL1 [HAPMAP]  
HGMDHYAL1
General knowledge
Family BrowserHYAL1 [UCSC Family Browser]
SOURCENM_007312
SOURCENM_033159
SOURCENM_153281
SOURCENM_153282
SOURCENM_153283
SOURCENM_153285
SMDHs.75619
SAGEHs.75619
Enzyme3.2.1.35 [ Enzyme-Expasy ]   3.2.1.35 [ Enzyme-SRS ]   3.2.1.35 [ IntEnz-EBI ]   3.2.1.35 [ BRENDA ]   3.2.1.35 [ KEGG ]   3.2.1.35 [ WIT ]
GOhyalurononglucosaminidase activity [Amigo]  hyalurononglucosaminidase activity
GOextracellular region [Amigo]  extracellular region
GOextracellular space [Amigo]  extracellular space
GOlysosome [Amigo]  lysosome
GOcarbohydrate metabolic process [Amigo]  carbohydrate metabolic process
GOmetabolic process [Amigo]  metabolic process
GOhydrolase activity, acting on glycosyl bonds [Amigo]  hydrolase activity, acting on glycosyl bonds
KEGGGlycosaminoglycan degradation
KEGGGlycan structures - degradation
PubGeneHYAL1
TreeFamHYAL1
CTD3373 [Comparative ToxicoGenomics Database]
Other databases
Probes
ProbeHYAL1 Related clones (RZPD - Berlin)
PubMed
PubMed23 Pubmed reference(s) in Entrez

Bibliography

Purification and microsequencing of hyaluronidase isozymes from human urine.
Csˆ„ka AB, Frost GI, Wong T, Stern R
FEBS letters. 1997 ; 417 (3) : 307-310.
PMID 9409739
 
Purification, cloning, and expression of human plasma hyaluronidase.
Frost GI, Csˆ„ka AB, Wong T, Stern R
Biochemical and biophysical research communications. 1997 ; 236 (1) : 10-15.
PMID 9223416
 
The hyaluronidase gene HYAL1 maps to chromosome 3p21.2-p21.3 in human and 9F1-F2 in mouse, a conserved candidate tumor suppressor locus.
Csˆ„ka AB, Frost GI, Heng HH, Scherer SW, Mohapatra G, Stern R
Genomics. 1998 ; 48 (1) : 63-70.
PMID 9503017
 
HYAL2, a human gene expressed in many cells, encodes a lysosomal hyaluronidase with a novel type of specificity.
Lepperdinger G, Strobl B, Kreil G
The Journal of biological chemistry. 1998 ; 273 (35) : 22466-22470.
PMID 9712871
 
Expression analysis of six paralogous human hyaluronidase genes clustered on chromosomes 3p21 and 7q31.
Csˆ„ka AB, Scherer SW, Stern R
Genomics. 1999 ; 60 (3) : 356-361.
PMID 10493834
 
Mutations in HYAL1, a member of a tandemly distributed multigene family encoding disparate hyaluronidase activities, cause a newly described lysosomal disorder, mucopolysaccharidosis IX.
Triggs-Raine B, Salo TJ, Zhang H, Wicklow BA, Natowicz MR
Proceedings of the National Academy of Sciences of the United States of America. 1999 ; 96 (11) : 6296-6300.
PMID 10339581
 
HYAL1LUCA-1, a candidate tumor suppressor gene on chromosome 3p21.3, is inactivated in head and neck squamous cell carcinomas by aberrant splicing of pre-mRNA.
Frost GI, Mohapatra G, Wong TM, Csˆ„ka AB, Gray JW, Stern R
Oncogene. 2000 ; 19 (7) : 870-877.
PMID 10702795
 
The 630-kb lung cancer homozygous deletion region on human chromosome 3p21.3: identification and evaluation of the resident candidate tumor suppressor genes. The International Lung Cancer Chromosome 3p21.3 Tumor Suppressor Gene Consortium.
Lerman MI, Minna JD
Cancer research. 2000 ; 60 (21) : 6116-6133.
PMID 11085536
 
The six hyaluronidase-like genes in the human and mouse genomes.
Csoka AB, Frost GI, Stern R
Matrix biology : journal of the International Society for Matrix Biology. 2001 ; 20 (8) : 499-508.
PMID 11731267
 
Regulation of hyaluronidase activity by alternative mRNA splicing.
Lokeshwar VB, Schroeder GL, Carey RI, Soloway MS, Iida N
The Journal of biological chemistry. 2002 ; 277 (37) : 33654-33663.
PMID 12084718
 
Characterization of the murine hyaluronidase gene region reveals complex organization and cotranscription of Hyal1 with downstream genes, Fus2 and Hyal3.
Shuttleworth TL, Wilson MD, Wicklow BA, Wilkins JA, Triggs-Raine BL
The Journal of biological chemistry. 2002 ; 277 (25) : 23008-23018.
PMID 11929860
 
Expression and regulation patterns of hyaluronidases in small cell lung cancer and glioma lines.
Junker N, Latini S, Petersen LN, Kristjansen PE
Oncology reports. 2003 ; 10 (3) : 609-616.
PMID 12684632
 
Structures of vertebrate hyaluronidases and their unique enzymatic mechanism of hydrolysis.
Jedrzejas MJ, Stern R
Proteins. 2005 ; 61 (2) : 227-238.
PMID 16104017
 
HYAL1 hyaluronidase in prostate cancer: a tumor promoter and suppressor.
Lokeshwar VB, Cerwinka WH, Isoyama T, Lokeshwar BL
Cancer research. 2005 ; 65 (17) : 7782-7789.
PMID 16140946
 
Hyaluronidase and CD44 hyaluronan receptor expression in squamous cell laryngeal carcinoma.
Christopoulos TA, Papageorgakopoulou N, Theocharis DA, Mastronikolis NS, Papadas TA, Vynios DH
Biochimica et biophysica acta. 2006 ; 1760 (7) : 1039-1045.
PMID 16713680
 
HYAL1-v1, an alternatively spliced variant of HYAL1 hyaluronidase: a negative regulator of bladder cancer.
Lokeshwar VB, Estrella V, Lopez L, Kramer M, Gomez P, Soloway MS, Lokeshwar BL
Cancer research. 2006 ; 66 (23) : 11219-11227.
PMID 17145867
 
Hyaluronidases: their genomics, structures, and mechanisms of action.
Stern R, Jedrzejas MJ
Chemical reviews. 2006 ; 106 (3) : 818-839.
PMID 16522010
 
Structure of human hyaluronidase-1, a hyaluronan hydrolyzing enzyme involved in tumor growth and angiogenesis.
Chao KL, Muthukumar L, Herzberg O
Biochemistry. 2007 ; 46 (23) : 6911-6920.
PMID 17503783
 
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Contributor(s)

Written10-2007Demitrios H Vynios
Department of Chemistry, University of Patras, 26500 Patras, Greece

Citation

This paper should be referenced as such :
Vynios DH . HYAL1 (hyaluronoglucosaminidase 1). Atlas Genet Cytogenet Oncol Haematol. October 2007 .
URL : http://AtlasGeneticsOncology.org/Genes/HYAL1ID40903ch3p21.html

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Oct 11 12:52:16 2008


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