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ITK (IL2-inducible T-cell kinase)

Identity

Other namesEMT
LYK
MGC126257
MGC126258
PSCTK2
HGNC ITK
Location 5q33.3
Location_base_pair Starts at 156540485 and ends at 156614687 bp from pter ( according to hg18-Mar_2006).

DNA/RNA

Description centromere to telomere orientation; Exons: 17
Transcription Transcript length: 4,419 bps

Protein

 
  ITK protein
Description Number of residues: 620 residues; Molecular weight: 71 kDa; Conserved domains: PH-Tec, Tec pleckstrin homology (PH) domain; BTK, Bruton's tyrosine kinase Cys-rich motif; SH3, Src homology 3 domains; SH2, Src homology 2 domains; TyrKc, Tyrosine kinase, catalytic domain.
Function Although originally described as an important component of proximal TCR signaling pathways, the Tec family tyrosine kinase Itk has become increasingly recognized for its important role in regulating T-helper-cell differentiation. Itk has a crucial role in Th2 responses, both the protective responses to pathogenic infections in addition to the pathological responses resulting in allergic asthma. Itk is not required for Th2 differentiation per se, but effector Th2 cytokine production during recall responses is severely impaired in the absence of Itk.

Implicated in

Entity t(5;9)(q33;q22)
Disease peripheral T-cell lymphomas, unspecified (PTCL-u). ITK-SYK transcripts were detected in 5 of 30 (17%) unspecified peripheral T-cell lymphomas, but not in cases of angioimmunoblastic T-cell lymphoma (n=9) and ALK-negative anaplastic large cell lymphoma (n=7)
Hybrid/Mutated Gene N-terminal pleckstrin homology domain and proline-rich region of ITK fused to the tyrosine kinase domain of SYK.
  

External links

Nomenclature
HGNCITK   6171
Entrez_GeneITK  3702  IL2-inducible T-cell kinase
Cards
AtlasITKID43329ch5q33
GeneCardsITK
EnsemblENSG00000113263 [Gene_View]  ITK [Vega]
GenatlasITK
Genomic and cartography
GoldenPathITK  -  5q33.3   chr5:156540485-156614687 +  5q31-q32   [Description]    (hg18-Mar_2006)
EnsemblITK - 5q31-q32 [CytoView]
NCBIMapview
OMIM186973 Disease map [OMIM]
HomoloGeneITK
Gene and transcription
GenbankAB209622 [ ENTREZ ]
GenbankAK311654 [ ENTREZ ]
GenbankAK312846 [ ENTREZ ]
GenbankBC109077 [ ENTREZ ]
GenbankBC109078 [ ENTREZ ]
RefSeqNM_005546 [ SRS ]    NM_005546 [ ENTREZ ]
RefSeqAC_000048 [ SRS ]    AC_000048 [ ENTREZ ]
RefSeqAC_000137 [ SRS ]    AC_000137 [ ENTREZ ]
RefSeqNC_000005 [ SRS ]    NC_000005 [ ENTREZ ]
RefSeqNT_023133 [ SRS ]    NT_023133 [ ENTREZ ]
RefSeqNW_001838954 [ SRS ]    NW_001838954 [ ENTREZ ]
RefSeqNW_922784 [ SRS ]    NW_922784 [ ENTREZ ]
CCDSITK CCDS - NCBI
AceViewITK AceView - NCBI
UnigeneHs.558348 [ SRS ]    Hs.558348 [ NCBI ]
Fast-db12506 (alternative variants)
Protein : pattern, domain, 3D structure
SwissProtQ08881 [ SRS]    Q08881 [ EXPASY ]     Q08881 [ INTERPRO ]     Q08881 [ UNIPROT ] Q08881 [ VarSplice FASTA ]
PrositePS50003 PH_DOMAIN [ SRS ]    PS50003 PH_DOMAIN [ Expasy ]
PrositePS00107 PROTEIN_KINASE_ATP [ SRS ]    PS00107 PROTEIN_KINASE_ATP [ Expasy ]
PrositePS50011 PROTEIN_KINASE_DOM [ SRS ]    PS50011 PROTEIN_KINASE_DOM [ Expasy ]
PrositePS00109 PROTEIN_KINASE_TYR [ SRS ]    PS00109 PROTEIN_KINASE_TYR [ Expasy ]
PrositePS50001 SH2 [ SRS ]    PS50001 SH2 [ Expasy ]
PrositePS50002 SH3 [ SRS ]    PS50002 SH3 [ Expasy ]
PrositePS51113 ZF_BTK [ SRS ]    PS51113 ZF_BTK [ Expasy ]
InterproIPR001562 BTK [ SRS ]    IPR001562 BTK [ EBI ]
InterproIPR001849 PH [ SRS ]    IPR001849 PH [ EBI ]
InterproIPR011993 PH_type [ SRS ]    IPR011993 PH_type [ EBI ]
InterproIPR000719 Prot_kinase_core [ SRS ]    IPR000719 Prot_kinase_core [ EBI ]
InterproIPR017441 Protein_kinase_ATP_bd_CS [ SRS ]    IPR017441 Protein_kinase_ATP_bd_CS [ EBI ]
InterproIPR000980 SH2 [ SRS ]    IPR000980 SH2 [ EBI ]
InterproIPR001452 SH3 [ SRS ]    IPR001452 SH3 [ EBI ]
InterproIPR013315 Spectrin_alpha [ SRS ]    IPR013315 Spectrin_alpha [ EBI ]
InterproIPR001245 Tyr_pkinase [ SRS ]    IPR001245 Tyr_pkinase [ EBI ]
InterproIPR008266 Tyr_pkinase_AS [ SRS ]    IPR008266 Tyr_pkinase_AS [ EBI ]
CluSTrQ08881
PfamPF00779 BTK [ SRS ]    PF00779 BTK [ Sanger ]    pfam00779 [ NCBI-CDD ]
PfamPF00169 PH [ SRS ]    PF00169 PH [ Sanger ]    pfam00169 [ NCBI-CDD ]
PfamPF07714 Pkinase_Tyr [ SRS ]    PF07714 Pkinase_Tyr [ Sanger ]    pfam07714 [ NCBI-CDD ]
PfamPF00017 SH2 [ SRS ]    PF00017 SH2 [ Sanger ]    pfam00017 [ NCBI-CDD ]
PfamPF00018 SH3_1 [ SRS ]    PF00018 SH3_1 [ Sanger ]    pfam00018 [ NCBI-CDD ]
SmartSM00107 BTK [EMBL]
SmartSM00233 PH [EMBL]
SmartSM00252 SH2 [EMBL]
SmartSM00326 SH3 [EMBL]
SmartSM00219 TyrKc [EMBL]
ProdomPD000001 Prot_kinase[INRA-Toulouse]
ProdomQ08881 ITK_HUMAN [ Domain structure ]   Q08881 ITK_HUMAN  [ sequences sharing at least 1 domain ]
ProdomPD000001[INRA-Toulouse]
ProdomQ08881 ITK_HUMAN [ Domain structure ]   Q08881 ITK_HUMAN  [ sequences sharing at least 1 domain ]
ProdomPD000001[INRA-Toulouse]
ProdomQ08881 ITK_HUMAN [ Domain structure ]   Q08881 ITK_HUMAN  [ sequences sharing at least 1 domain ]
BlocksQ08881
PDB1SM2 [ SRS ]    1SM2 [ PdbSum ],   1SM2 [ IMB ]   1SM2 [ RSDB ]
PDB1SNU [ SRS ]    1SNU [ PdbSum ],   1SNU [ IMB ]   1SNU [ RSDB ]
PDB1SNX [ SRS ]    1SNX [ PdbSum ],   1SNX [ IMB ]   1SNX [ RSDB ]
PDB2E6I [ SRS ]    2E6I [ PdbSum ],   2E6I [ IMB ]   2E6I [ RSDB ]
PDB2YUQ [ SRS ]    2YUQ [ PdbSum ],   2YUQ [ IMB ]   2YUQ [ RSDB ]
HPRD01746
Protein Interaction databases
DIPQ08881
IntActQ08881
Polymorphism : SNP, mutations, diseases
OMIM186973    [ map ]   
GENETests186973
SNPITK [dbSNP-NCBI]  
SNPNM_005546 [SNP-NCI]  
SNPITK [GeneSNPs - Utah]  ITK] [HGBASE - SRS]
HAPMAPITK [HAPMAP]  
COSMICITK [Somatic mutation (COSMIC-CGP-Sanger)]  
TICdbITK [Translocation breakpoints In Cancer]  
HGMDITK
Genetic AssociationITK
CDC HuGEITK
General knowledge
Family BrowserITK [UCSC Family Browser]
SOURCENM_005546
SMDHs.558348
SAGEHs.558348
Enzyme2.7.10.2 [ Enzyme-Expasy ]   2.7.10.2 [ Enzyme-SRS ]   2.7.10.2 [ IntEnz-EBI ]   2.7.10.2 [ BRENDA ]   2.7.10.2 [ KEGG ]   
GOnucleotide binding [Amigo]  nucleotide binding
GOnon-membrane spanning protein tyrosine kinase activity [Amigo]  non-membrane spanning protein tyrosine kinase activity
GOprotein binding [Amigo]  protein binding
GOATP binding [Amigo]  ATP binding
GOcytosol [Amigo]  cytosol
GOplasma membrane [Amigo]  plasma membrane
GOprotein amino acid phosphorylation [Amigo]  protein amino acid phosphorylation
GOcellular defense response [Amigo]  cellular defense response
GOintracellular signaling cascade [Amigo]  intracellular signaling cascade
GOzinc ion binding [Amigo]  zinc ion binding
GOkinase activity [Amigo]  kinase activity
GOtransferase activity [Amigo]  transferase activity
GOmetal ion binding [Amigo]  metal ion binding
BIOCARTAThe Co-Stimulatory Signal During T-cell Activation    [Genes]
KEGGT cell receptor signaling pathway
KEGGLeukocyte transendothelial migration
PubGeneITK
TreeFamITK
CTD3702 [Comparative ToxicoGenomics Database]
Other databases
Probes
ProbeITK Related clones (RZPD - Berlin)
PubMed
PubMed43 Pubmed reference(s) in Entrez

Bibliography

Altered T cell receptor signaling and disrupted T cell development in mice lacking Itk.
Liao XC, Littman DR
Immunity. 1995 ; 3 (6) : 757-769.
PMID 8777721
 
Regulatory intramolecular association in a tyrosine kinase of the Tec family.
Andreotti AH, Bunnell SC, Feng S, Berg LJ, Schreiber SL
Nature. 1997 ; 385 (6611) : 93-97.
PMID 8985255
 
T cell receptor-initiated calcium release is uncoupled from capacitative calcium entry in Itk-deficient T cells.
Liu KQ, Bunnell SC, Gurniak CB, Berg LJ
The Journal of experimental medicine. 1998 ; 187 (10) : 1721-1727.
PMID 9584150
 
Requirement for Tec kinases Rlk and Itk in T cell receptor signaling and immunity.
Schaeffer EM, Debnath J, Yap G, McVicar D, Liao XC, Littman DR, Sher A, Varmus HE, Lenardo MJ, Schwartzberg PL
Science (New York, N.Y.). 1999 ; 284 (5414) : 638-641.
PMID 10213685
 
Tec kinases: a family with multiple roles in immunity.
Yang WC, Collette Y, Nunˆ®s JA, Olive D
Immunity. 2000 ; 12 (4) : 373-382.
PMID 10795735
 
Tec kinases: modulators of lymphocyte signaling and development.
Lewis CM, Broussard C, Czar MJ, Schwartzberg PL
Current opinion in immunology. 2001 ; 13 (3) : 317-325.
PMID 11406363
 
Novel t(5;9)(q33;q22) fuses ITK to SYK in unspecified peripheral T-cell lymphoma.
Streubel B, Vinatzer U, Willheim M, Raderer M, Chott A
Leukemia : official journal of the Leukemia Society of America, Leukemia Research Fund, U.K. 2006 ; 20 (2) : 313-318.
PMID 16341044
 
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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Contributor(s)

Written04-2007Berthold Streubel
Department of Pathology, Medical University of Vienna, Waehringer, Guertel 18-20, A-1090 Vienna, Austria

Citation

This paper should be referenced as such :
Streubel B . ITK (IL2-inducible T-cell kinase). Atlas Genet Cytogenet Oncol Haematol. April 2007 .
URL : http://AtlasGeneticsOncology.org/Genes/ITKID43329ch5q33.html

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Dec 6 17:56:30 2008


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