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RCHY1 (ring finger and CHY zinc finger domain containing 1)

Identity

Other namesPIRH2
ARNIP
CHIMP
RNF199
ZNF363
PRO1996
DKFZp586C1620
Hugo RCHY1
Location 4q21.1

DNA/RNA

Description The gene encompasses 32 kb of DNA; 9 exons.
Transcription 4.3 kb nucleotides mRNA. 783 bp open reading frame.

Protein

 
  Immunohistochemical detection of human RCHY1 protein in non-small cell lung cancers. (A) squamous cell carcinoma, and (B) large cell carcinoma.
Description 261 amino acids; 32 kDa protein.
Expression RCHY1 expresses at higher level in liver, testis and heart. Lower expression is detected in lung, brain, muscle and spleen. RCHY1 is overexpressed in non-small cell lung cancers.
Localisation The localization of RCHY1 protein in human lung tumors was evaluated immunohistochemically. RCHY1 protein was found primarily in the cytoplasm and membrane and a small portion in the nucleus of malignant cells.
Function RCHY1 is an ubiquitin-protein E3 ligase that promotes p53 degradation. The RCHY1 gene encodes a RING-H2 domain-containing protein with intrinsic ubiquitin-protein ligase activity. It has been reported that RCHY1( Pirh2) physically interacts with p53 and promotes ubiquitination of p53 independently of Mdm2. RCHY1 was also reported to be transactivated by the p53 product in MEFs, murine proB cell BaF3 and human BJT fibroblasts cells. Therefore, like MDM2, RCHY1 participates in an autoregulatory feedback loop that controls p53 function. Expression of RCHY1 decreased the level of p53 protein, while abrogation of endogenous RCHY1 expression increased the level of p53. Furthermore, RCHY1 represses p53 functions, including p53-dependent transactivation and growth inhibition. RCHY1 is overexpressed in both human and murine lung cancers by comparing Pirh2 mRNA and protein level between lung neoplastic tissues and uninvolved adjacent lung tissue. The increased RCHY1 protein could cause degradation of wild type p53 and reduce the tumor suppression function in tumor cells.
It has been reported that coexpression of RCHY1(ARNIP) and androgen receptor (AR) in COS-1 cells reduces the interaction between AR N- and C-terminus. The RING-H2 domain of the RCHY1 functions as an ubiquitin-protein ligase in vitro in the presence of a specific ubiquitin-conjugating enzyme, Ubc4-1. Mutation of a single cysteine residue in the RCHY RING-H2 domain (Cys145Ala) abolished this E3 ubiquitin ligase activity. Fluorescent protein tagging studies revealed that AR-RCHY1 interaction was hormone-independent in COS-1 cells, and suggest that co-localization of both AR and RCHY1to the nucleus upon androgen addition may allow RCHY1 to play a role in nuclear processes.
It has been reported that wild-type RCHY1is an unstable protein with a short half-life and coexpression of TIP60 enhances RCHY1 protein stability and alters RCHY1 subcellular localization. In addition, MVP (measles virus phosphoprotein ) is able to specifically interact with and stabilize the RCHY1 by preventing its ubiquitination. It has been reported that the RCHY1 also interacts with NTKL-BP1 (N-terminal kinase-like protein-binding protein 1) protein
Homology It belongs to the ring finger ubiquitin protein E3 ligase family. Containing Conserved RING-finger Domain (residues 145 - 186 ) and CHY zinc finger (residues 20-94).

Mutations

Note Unknown

Implicated in

Entity Non-Small Cell Lung Cancer
Disease Lung cancers are pathologically classified as small cell lung cancer and non-small cell lung cancer (non-small cell lung cancer includes large cell carcinomas, squamous cell carcinomas and adenocarcinomas).
Oncogenesis RCHY1 protein is overexpressed in about 84% human lung cancers compared to uninvolved lung tissue. The RCHY1 protein was also elevated in about 93% of murine lung tumors. Because RCHY1 is an ubiquitin-protein ligase that promotes p53 protein degradation, the increased RCHY1 expression could play an important role in lung tumorigenesis.
  

External links

Nomenclature
HugoRCHY1
GDBRCHY1
Entrez_GeneRCHY1  25898  ring finger and CHY zinc finger domain containing 1
Cards
AtlasRCHY1ID43012ch04q21
GeneCardsRCHY1
EnsemblRCHY1 [Search_View]   ENSG00000163743 [Gene_View]
GenatlasRCHY1
GeneLynxRCHY1
eGenomeRCHY1
euGene25898
Genomic and cartography
GoldenPathRCHY1  -  4q21.1   chr4:76623381-76658652 -  4q21.1    (hg18-Mar_2006)
EnsemblRCHY1 - 4q21.1 [CytoView]
NCBIMapview
OMIMDisease map [OMIM]
HomoloGeneRCHY1
Gene and transcription
GenbankAB209072 [ ENTREZ ]
GenbankAF247041 [ ENTREZ ]
GenbankAF255666 [ ENTREZ ]
GenbankAF305424 [ ENTREZ ]
GenbankAK091501 [ ENTREZ ]
RefSeqNM_001008925 [ SRS ]    NM_001008925 [ ENTREZ ]
RefSeqNM_001009922 [ SRS ]    NM_001009922 [ ENTREZ ]
RefSeqNM_015436 [ SRS ]    NM_015436 [ ENTREZ ]
RefSeqAC_000047 [ SRS ]    AC_000047 [ ENTREZ ]
RefSeqNC_000004 [ SRS ]    NC_000004 [ ENTREZ ]
RefSeqNT_016354 [ SRS ]    NT_016354 [ ENTREZ ]
RefSeqNW_922162 [ SRS ]    NW_922162 [ ENTREZ ]
AceViewRCHY1 AceView - NCBI
UnigeneHs.48297 [ SRS ]    Hs.48297 [ NCBI ]     HS48297 [ spliceNest ]
Fast-db5664 (alternative variants)
Protein : pattern, domain, 3D structure
SwissProtQ96PM5 [ SRS]    Q96PM5 [ EXPASY ]     Q96PM5 [ INTERPRO ]
PrositePS51266 ZF_CHY [ SRS ]    PS51266 ZF_CHY [ Expasy ]
PrositePS51270 ZF_CTCHY [ SRS ]    PS51270 ZF_CTCHY [ Expasy ]
PrositePS00518 ZF_RING_1 [ SRS ]    PS00518 ZF_RING_1 [ Expasy ]
PrositePS50089 ZF_RING_2 [ SRS ]    PS50089 ZF_RING_2 [ Expasy ]
InterproIPR008913 Znf_CHY [ SRS ]    IPR008913 Znf_CHY [ EBI ]
InterproIPR001841 Znf_RING [ SRS ]    IPR001841 Znf_RING [ EBI ]
InterproIPR013083 Znf_RING/FYVE/PHD [ SRS ]    IPR013083 Znf_RING/FYVE/PHD [ EBI ]
CluSTrQ96PM5
PfamPF00097 zf-C3HC4 [ SRS ]    PF00097 zf-C3HC4 [ Sanger ]    pfam00097 [ NCBI-CDD ]
PfamPF05495 zf-CHY [ SRS ]    PF05495 zf-CHY [ Sanger ]    pfam05495 [ NCBI-CDD ]
SmartSM00184 RING [EMBL]
BlocksQ96PM5
PDB2JRJ [ SRS ]    2JRJ [ PdbSum ],   2JRJ [ IMB ]   2JRJ [ RSDB ]
HPRD07607
Protein Interaction databases
DIPQ96PM5
IntActQ96PM5
Polymorphism : SNP, mutations, diseases
OMIM607680    [ map ]   
GENECLINICS607680
SNPRCHY1 [dbSNP-NCBI]  
SNPNM_001008925 [SNP-NCI]  
SNPNM_001009922 [SNP-NCI]  
SNPNM_015436 [SNP-NCI]  
SNPRCHY1 [GeneSNPs - Utah]  RCHY1] [HGBASE - SRS]
HAPMAPRCHY1 [HAPMAP]  
COSMICRCHY1 [Somatic mutation (COSMIC-CGP-Sanger)]  
HGMDRCHY1
General knowledge
Family BrowserRCHY1 [UCSC Family Browser]
SOURCENM_001008925
SOURCENM_001009922
SOURCENM_015436
SMDHs.48297
SAGEHs.48297
GOprotein binding [Amigo]  protein binding
GOprotein binding [Amigo]  protein binding
GOnucleus [Amigo]  nucleus
GOcytoplasm [Amigo]  cytoplasm
GOzinc ion binding [Amigo]  zinc ion binding
GOmetal ion binding [Amigo]  metal ion binding
PubGeneRCHY1
TreeFamRCHY1
Other databases
Probes
ProbeRCHY1 Related clones (RZPD - Berlin)
PubMed
PubMed14 Pubmed reference(s) in LocusLink

Bibliography

Cloning and characterization of an androgen receptor N-terminal-interacting protein with ubiquitin-protein ligase activity.
Beitel LK, Elhaji YA, Lumbroso R, Wing SS, Panet-Raymond V, Gottlieb B, Pinsky L, Trifiro MA
Journal of molecular endocrinology. 2002 ; 29 (1) : 41-60.
PMID 12200228
 
Pirh2, a p53-induced ubiquitin-protein ligase, promotes p53 degradation.
Leng RP, Lin Y, Ma W, Wu H, Lemmers B, Chung S, Parant JM, Lozano G, Hakem R, Benchimol S
Cell. 2003 ; 112 (6) : 779-791.
PMID 12654245
 
Expression of Pirh2, a newly identified ubiquitin protein ligase, in lung cancer.
Duan W, Gao L, Druhan LJ, Zhu WG, Morrison C, Otterson GA, Villalona-Calero MA
Journal of the National Cancer Institute. 2004 ; 96 (22) : 1718-1721.
PMID 15547185
 
Control of human PIRH2 protein stability: involvement of TIP60 and the proteosome.
Logan IR, Sapountzi V, Gaughan L, Neal DE, Robson CN
The Journal of biological chemistry. 2004 ; 279 (12) : 11696-11704.
PMID 14701804
 
A new human gene hNTKL-BP1 interacts with hPirh2.
Zhang L, Li J, Wang C, Ma Y, Huo K
Biochemical and biophysical research communications. 2005 ; 330 (1) : 293-297.
PMID 15781263
 
Inhibition of ubiquitination and stabilization of human ubiquitin E3 ligase PIRH2 by measles virus phosphoprotein.
Chen M, Cortay JC, Logan IR, Sapountzi V, Robson CN, Gerlier D
Journal of virology. 2005 ; 79 (18) : 11824-11836.
PMID 16140759
 
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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Contributor(s)

Written03-2006Wenrui Duan, Miguel A. Villalona-Calero

Citation

This paper should be referenced as such :
Duan W, Villalona-Calero MA . RCHY1 (ring finger and CHY zinc finger domain containing 1). Atlas Genet Cytogenet Oncol Haematol. March 2006 .
URL : http://AtlasGeneticsOncology.org/Genes/RCHY1ID43012ch04q21.html

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon May 12 18:08:28 2008


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