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RHOB (ras homolog gene family, member B)

Identity

Other namesARH6
ARHB
H6
RHOH6
HGNC RHOB
Location 2p24.1
Location_base_pair Starts at 20510316 and ends at 20512682 bp from pter ( according to hg18-Mar_2006).

DNA/RNA

 
Description The gene encompasses 2,366 bps (chr2:20,510,316-20,512,681); 1 exon.
Transcription The coding sequence (CDS) region is 395.983bp (588 bp) encoding a protein of 196 aa long.

Protein

Description Length 196 aa, molecular weight 22123 Da (unprocessed precursor). RhoB protein exists in different geranylgeranylated (RhoB-GG) or farnesylated (RhoB-F) isoforms in cells.
Expression Widely expressed.
Localisation Endosome; Late endosome; late endosomal membrane; cell membrane; Also detected at the nuclear margin and in the nucleus. Prenylation specifies the subcellular location of RHOB. In general, the farnesylated form is localized to the plasma membrane while the geranylgeranylated form is localized to the endosome.
Function Regulator of protein signaling and trafficking:
Plays a pivotal role in the dynamic regulation of the actin cytoskeleton. Involved in intracellular protein trafficking of a number of proteins. Targets PRK1 to endosomes and is involved in trafficking of the EGF receptor from late endosomes to lysosomes. Also required for stability and nuclear trafficking of Akt which promotes endothelial cell survival during vascular development. Identified as a component of outside-in signaling pathways that coordinate Src activation with its translocation to transmembrane receptors.
Negative modifier of cancer progression:
Affects cell adhesion and growth factor signaling in transformed cells. Plays a negative role in tumorigenesis as RhoB deletion increases tumor formation initiated by Ras mutation. Limits the proliferation of transformed cells by facilitating turnover of oncogene c-Myc. Expression levels are dramatically decreased in lung, head and neck, and brain cancer, when tumors become more aggressive.
Modulator of cancer cell apoptosis:
Promotes proapoptotic signaling of regulators involved in cell cycle checkpoints, cell adhesion, vesicle trafficking, MAPK signaling, transcription, and immunity. Mediates apoptosis in neoplastically transformed cells after DNA damage. Is essential for apoptosis and antineoplastic activity of farnesyltransferase inhibitors in a mouse model. Is one of the targets of farnesyltransferase inhibitors which are currently under investigation as cancer therapeutics.
Homology Member of the ras gene superfamily; rho family; GTP-binding proteins. The RhoA, RhoB, and RhoC proteins form a closely related subgroup that are about 90% identical in amino acid sequence. The sequences of RHOB are highly-conserved between species (from human to fly). Amino acid sequences of human, mouse and rat are 100% identical while sequence homology between human and chicken is 97% identical.

Implicated in

Entity Lung cancer
Note RhoB expression is frequently downregulated in lung cancer by multiple mechanisms. Low or no expression of RhoB is more frequently observed in poorly- or moderately-differentiated adenocarcinomas, and indicative of poor patient prognosis.
  
Entity Head and neck cancer
Note RhoB expression decreases to undetectable level as tumors become more invasive and poorly differentiated. In contrast, Ki67 (proliferation marker) and RhoA protein levels increase with tumor progression.
  

External links

Nomenclature
HGNCRHOB   668
Entrez_GeneRHOB  388  ras homolog gene family, member B
Cards
AtlasRHOBID42108ch2p24
GeneCardsRHOB
EnsemblENSG00000143878 [Gene_View]  RHOB [Vega]
GenatlasRHOB
Genomic and cartography
GoldenPathRHOB  -  2p24.1   chr2:20510316-20512682 +  2p24   [Description]    (hg18-Mar_2006)
EnsemblRHOB - 2p24 [CytoView]
NCBIMapview
OMIM165370 Disease map [OMIM]
HomoloGeneRHOB
Gene and transcription
GenbankAF171089 [ ENTREZ ]
GenbankAF498971 [ ENTREZ ]
GenbankAK124398 [ ENTREZ ]
GenbankAK312487 [ ENTREZ ]
GenbankBC062781 [ ENTREZ ]
RefSeqNM_004040 [ SRS ]    NM_004040 [ ENTREZ ]
RefSeqAC_000045 [ SRS ]    AC_000045 [ ENTREZ ]
RefSeqAC_000134 [ SRS ]    AC_000134 [ ENTREZ ]
RefSeqNC_000002 [ SRS ]    NC_000002 [ ENTREZ ]
RefSeqNT_015926 [ SRS ]    NT_015926 [ ENTREZ ]
RefSeqNW_001838767 [ SRS ]    NW_001838767 [ ENTREZ ]
RefSeqNW_927719 [ SRS ]    NW_927719 [ ENTREZ ]
CCDSRHOB CCDS - NCBI
AceViewRHOB AceView - NCBI
UnigeneHs.502876 [ SRS ]    Hs.502876 [ NCBI ]
Fast-db1816 (alternative variants)
Protein : pattern, domain, 3D structure
SwissProtP62745 [ SRS]    P62745 [ EXPASY ]     P62745 [ INTERPRO ]     P62745 [ UNIPROT ] P62745 [ VarSplice FASTA ]
InterproIPR003578 GTPase_Rho [ SRS ]    IPR003578 GTPase_Rho [ EBI ]
InterproIPR013753 Ras [ SRS ]    IPR013753 Ras [ EBI ]
InterproIPR001806 Ras_trnsfrmng [ SRS ]    IPR001806 Ras_trnsfrmng [ EBI ]
InterproIPR005225 Small_GTP_bd [ SRS ]    IPR005225 Small_GTP_bd [ EBI ]
CluSTrP62745
PfamPF00071 Ras [ SRS ]    PF00071 Ras [ Sanger ]    pfam00071 [ NCBI-CDD ]
SmartSM00174 RHO [EMBL]
BlocksP62745
PDB2FV8 [ SRS ]    2FV8 [ PdbSum ],   2FV8 [ IMB ]   2FV8 [ RSDB ]
HPRD01321
Protein Interaction databases
DIPP62745
IntActP62745
Polymorphism : SNP, mutations, diseases
OMIM165370    [ map ]   
GENETests165370
SNPRHOB [dbSNP-NCBI]  
SNPNM_004040 [SNP-NCI]  
SNPRHOB [GeneSNPs - Utah]  RHOB] [HGBASE - SRS]
HAPMAPRHOB [HAPMAP]  
COSMICRHOB [Somatic mutation (COSMIC-CGP-Sanger)]  
HGMDRHOB
Genetic AssociationRHOB
CDC HuGERHOB
General knowledge
Family BrowserRHOB [UCSC Family Browser]
SOURCENM_004040
SMDHs.502876
SAGEHs.502876
GOnucleotide binding [Amigo]  nucleotide binding
GOGTPase activity [Amigo]  GTPase activity
GOprotein binding [Amigo]  protein binding
GOGTP binding [Amigo]  GTP binding
GOintracellular [Amigo]  intracellular
GOnucleus [Amigo]  nucleus
GOendosome [Amigo]  endosome
GOplasma membrane [Amigo]  plasma membrane
GOtransformed cell apoptosis [Amigo]  transformed cell apoptosis
GOcell adhesion [Amigo]  cell adhesion
GOsmall GTPase mediated signal transduction [Amigo]  small GTPase mediated signal transduction
GORho protein signal transduction [Amigo]  Rho protein signal transduction
GOmulticellular organismal development [Amigo]  multicellular organismal development
GOendosome to lysosome transport [Amigo]  endosome to lysosome transport
GOprotein transport [Amigo]  protein transport
GOcell differentiation [Amigo]  cell differentiation
GOlate endosome membrane [Amigo]  late endosome membrane
GOpositive regulation of angiogenesis [Amigo]  positive regulation of angiogenesis
GOnegative regulation of cell cycle [Amigo]  negative regulation of cell cycle
PubGeneRHOB
TreeFamRHOB
CTD388 [Comparative ToxicoGenomics Database]
Other databases
Probes
ProbeRHOB Related clones (RZPD - Berlin)
PubMed
PubMed54 Pubmed reference(s) in Entrez

Bibliography

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PMID 3888408
 
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Regulation of epidermal growth factor receptor traffic by the small GTPase rhoB.
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RhoB alteration is necessary for apoptotic and antineoplastic responses to farnesyltransferase inhibitors.
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PMID 10913192
 
RhoB is required to mediate apoptosis in neoplastically transformed cells after DNA damage.
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PMID 11353846
 
Actin' up: RhoB in cancer and apoptosis.
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Suppression of rho B expression in invasive carcinoma from head and neck cancer patients.
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RhoB controls Akt trafficking and stage-specific survival of endothelial cells during vascular development.
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PMID 14597666
 
EGFR, ErbB2 and Ras but not Src suppress RhoB expression while ectopic expression of RhoB antagonizes oncogene-mediated transformation.
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PMID 14647415
 
Akt mediates Ras downregulation of RhoB, a suppressor of transformation, invasion, and metastasis.
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PMID 15169915
 
Farnesyltransferase inhibitors disrupt EGF receptor traffic through modulation of the RhoB GTPase.
Wherlock M, Gampel A, Futter C, Mellor H
Journal of cell science. 2004 ; 117 (Pt 15) : 3221-3231.
PMID 15226397
 
Loss of RhoB expression in human lung cancer progression.
Mazieres J, Antonia T, Daste G, Muro-Cacho C, Berchery D, Tillement V, Pradines A, Sebti S, Favre G
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PMID 15102679
 
RhoB and actin polymerization coordinate Src activation with endosome-mediated delivery to the membrane.
Sandilands E, Cans C, Fincham VJ, Brunton VG, Mellor H, Prendergast GC, Norman JC, Superti-Furga G, Frame MC
Developmental cell. 2004 ; 7 (6) : 855-869.
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RhoB facilitates c-Myc turnover by supporting efficient nuclear accumulation of GSK-3.
Huang M, Kamasani U, Prendergast GC
Oncogene. 2006 ; 25 (9) : 1281-1289.
PMID 16247449
 
RhoB in cancer suppression.
Huang M, Prendergast GC
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PMID 16329046
 
RhoB is frequently downregulated in non-small-cell lung cancer and resides in the 2p24 homozygous deletion region of a lung cancer cell line.
Sato N, Fukui T, Taniguchi T, Yokoyama T, Kondo M, Nagasaka T, Goto Y, Gao W, Ueda Y, Yokoi K, Minna JD, Osada H, Kondo Y, Sekido Y
International journal of cancer. Journal international du cancer. 2007 ; 120 (3) : 543-551.
PMID 17096327
 
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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Contributor(s)

Written02-2007Minzhou Huang, Lisa D Laury-Kleintop, George Prendergast

Citation

This paper should be referenced as such :
Huang M, Laury-Kleintop LD, Prendergast G . RHOB (ras homolog gene family, member B). Atlas Genet Cytogenet Oncol Haematol. February 2007 .
URL : http://AtlasGeneticsOncology.org/Genes/RHOBID42108ch2p24.html

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Dec 6 17:59:08 2008


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