Atlas of Genetics and Cytogenetics in Oncology and Haematology
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Chromosome 1
Chromosome 1 : G-banding, diagram and R-banding
- Claude Léonard, Jean-Loup Huret
Leukaemia
1q rearrangements in multiple myeloma
1p32 rearrangements
t(1;1)(p36;q21) in Non Hodgkin Lymphoma
t(1;2)(q25;p23)
t(1;2)(q12;q37)
t(1;3)(p36;q21)
t(1;3)(p36;p21)
t(1;3)(p32;p21)
t(1;5)(p32;q31)
t(1;5)(q21;q33) (MPD; TPM3/PDGFRB; rare)
t(1;5)(q22;q33)
t(1;6)(p35;p25)
t(1;7)(q10;p10)
t(1;7)(p36;q34)
t(1;7)(p34;q34)
t(1;7)(q21;q22)
t(1;7)(p32;q34)
t(1;8)(p22-p32;q22-q23)
t(1;9)(q24;q34)
t(1;11)(p32;q23) (AML, ALL; AF1P and MLL; not rare)
t(1;11)(q23;p15)
t(1;11)(q21;q23)
t(1;12)(q25;p13)
t(1;12)(p36;p13)
t(1;12)(q21;p13) (AML, ALL; ARNT and ETV6; rare)
t(1;13)(q32;q14)
t(1;14)(p32;q11)
t(1;14)(q21;q32) BCL9/IGH
t(1;14)(q21;q32) FCGR2B/IGH
t(1;14)(q21;q32) IRTA1/IGH
t(1;14)(q21;q32) MUC1/IGH
t(1;14)(q23;q32) (ALL, NHL, CLD; ---; rare)
t(1;14)(q25;q32)
t(1;14)(p22;q32) in non Hodgkin's lymphoma (NHL)
dic(1;15)(p11;p11)
t(1;16)(q11;q11)
t(1;16)(q12;q24)
t(1;18)(q25;q23)
t(1;18)(q10;q10)
t(1;19)(q23;p13)
t(1;19)(p13;p13.1)
t(1;21)(p36;q22)
t(1;21)(p32;q22)
t(1;21)(p35;q22)
t(1;21)(q21;q22)
t(1;22)(q21;q11)
t(1;22)(p13;q13)
t(Y;1)(q12;q12)
Solid Tumors
inv(1)(q22;q25)
t(1;2)(q25;p23)
t(1;2)(q25;p23)
t(1;2)(q25;p23)
t(1;3)(q22;q12)
t(1;3)(p36;q25)
t(1;13)(p36;q14)
t(1;13)(p36;q14)
t(1;17)(p34;p13)
t(X;1)(p11;q21)
Cancer prone diseases
Autoimmune Lymphoproliferative Syndrome
Glomuvenous malformation (GVM)
Hereditary Paraganglioma (PGL)
Hyperparathyroidism-Jaw Tumor syndrome (HPT-JT)
MAP (MUTYH-Associated Polyposis )
MUTYH associated polyposis
All Genes by Location (Kb)
Chromosome 1 by location
Losses / Amplicons
BONE/SOFT TISSUE
BREAST
DIGESTIVE TRACT
ENDOCRINE GLANDS
EYE
FEMAL GENITAL
HEMATOLOGIC
MALE GENITAL
NERVOUS SYSTEM
RESPIRATORY TRACT
SKIN
URINARY TRACT
External links
Chromosome 1 - HUGO Chromosomes
Chromosome 1 - GoldenPath - Santa Cruz
Chromosome 1 - Ensembl Project
Chromosome 1 - Map View - NCBI
Chromosome 1 - GDB (Genome Data Base)
Chromosome 1 - OMIM Gene map
Chromosome 1 - Genomic Variants
Chromosome 1 - HAPMAP Project
Chromosome 1 - Genome Channel - ORNL
Chromosome 1 - LaunchPad HGMIS
Chromosome 1 - Human Protein Atlas
Chromosome 1 - SpliceNest
Human BAC Resource (NCBI)
FISH-mapped BACs (CCAP)
Genetic Maps (CHLC)
YACs mapped by FISH (Bari)
PCP (Partial Chromosome Paints) (Bari)
Positional Cloning Project (Berlin Dahlem)
Mouse homology - OMIM - NCBI
Cancer GeneWeb
GeneCards (Weizmann)
Human Proteomics Initiative (Expasy)
Genes
Annotated genes
Symbol
Location (Kb)
Location (pter-qter)
ABL2
177335.085
1q24-q25
AKT3
241718.158
1q43-q44
ARHGEF2
154183.270
1q21-q22
ARNT
149048.810
1q21
BCL9
145479.806
1q21
CASP9
15691.384
1p36.3-p36.1
CD53
111215.344
1p13
CDC73
191357.784
1q25
CENPF
212843.155
1q32-q41
EGLN1
229568.054
1q42.1
EPS15
51592.524
1p32
FCGR2B
159899.564
1q23
FH
239727.528
1q42.1
GLMN
92484.545
1p22.1
JUN
59019.053
1p32-p31
KCNH1
208923.178
1q32-q41
KIF14
198787.930
1q32.1
LCK
32489.427
1p34.3
LPHN2
82038.670
1p31.1
MDS2
23826.410
1p36
MIB2
1540.747
1p36.33
MLLT11
149298.775
1q21
MTHFR
11768.374
1p36.3
MUTYH
45567.501
1p34.3-p32.1
NOTCH2
120255.701
1p13-p11
NRAS
115051.108
1p13.2
PBX1
162795.561
1q23
PDE4DIP
143601.948
1q12
PRCC
155003.898
1q21.1
PRDM16
2975.604
1p36.23-p33
PRDM2
13903.937
1p36.21
PRDX1
45749.295
1p34.1
PTCH2
45060.675
1p33-p34
PTGS2
184907.593
1q25.2-q25.3
PVRL4
159308.120
1q22-q23.2
RAP1A
111963.928
1p13.3
RBM15
110683.468
1p13
REG4
120138.232
1p13.1-p12
RHOC
113045.272
1p13.1
RPS6KA1
26728.836
1p
S100A13
151857.904
1q21
SDHB
17217.814
1p36.1-p35
SDHC
159550.790
1q23.3
SFPQ
35421.790
1p34.3
STIL
47488.398
1q32|1p32
TAL1
47454.551
1p32
TNN
173303.617
1q23-q24
TPM3
152394.404
1q21.2
TPR
184547.411
1q25
TSPAN1
46418.799
1p34.1
VTCN1
117487.733
1p13.1
Other genes
possibly implicated
in cancer
Symbol
Location (Kb)
Location (pter-qter)
ACBD3
224399.005
1q42.12
ACOT7
6246.920
1p36.31-p36.11
ACTA1
227633.618
1q42.13-q42.2
ADAM15
153290.386
1q21.3
ADAM30
120237.679
1p13-p11
ADAMTS4
159426.162
1q21-q23
ADC
33319.301
-
ADIPOR1
201176.576
1p36.13-q41
ADORA3
111827.493
1p13.2
ADSS
242638.420
1cen-q12
AGMAT
15771.739
1p36.21
AGRN
945.366
1p36.33
AGT
228904.892
1q42-q43
AIM1L
26520.959
1p36.11
AIM2
157298.899
1q22
AIR
30977.903
1p31
AJAP1
4614.965
1p36.32
AK2
33246.173
1p34
AK5
77520.330
1p31
AKR1A1
45789.085
1p33-p32
AKR7A2
19503.051
1p35.1-p36.23
AKR7A3
19481.644
1p35.1-p36.23
ALDH4A1
19070.513
1p36
ALDH9A1
163898.073
1q23.1
ALPL
21708.445
1p36.1-p34
AMPD1
115017.245
1p13
AMPD2
109963.982
1p13.3
ANGPTL1
177085.294
1q25.2
ANGPTL3
62835.775
1p31.1-p22.3
AOF2
23218.533
1p36.12
APITD1
10412.746
1p36.22
ARF1
226337.474
1q42
ARHGAP29
94407.051
1p22.1
ARHGEF10L
17738.917
1p36.13
ARHGEF11
155171.257
1q21
ARHGEF16
3369.982
1p36.3
ARHGEF19
16397.186
1p36.13
ARID1A
26895.109
1p35.3
ARID4B
233396.834
1q42.1-q43
ASH1L
153571.677
1q22
ASPM
195319.997
1q31
ATF3
210848.617
1q32.3
ATF6
160002.708
1q22-q23
ATG4C
63022.391
1p31.3
ATP1B1
167342.571
1q24
ATP6V0B
44213.189
1p32.3
AURKAIP1
1298.973
1p36.33
B4GALT2
44217.453
1p34-p33
BAI2
31965.306
1p35
BAT2D1
169721.290
1q23.3
BCAR3
93799.938
1p22.1
BCAS2
114911.706
1p21-p13.3
BCL10
85504.050
1p22
BCL2L15
114220.959
1p13.2
BGLAP
154478.575
1q25-q31
BLZF1
167603.818
1q24
BMP6P1
45021.844
22q11.2
BMP8B
39996.490
1p35-p32
BNIPL
149275.658
1q21.2
BRDT
92187.720
1p22.1
BTG2
201541.287
1q32
C1QA
22835.705
1p36.12
C1orf102
36666.488
1p34.3
C1orf124
229540.305
1q42.12-q43
C1orf128
23977.475
1p36.11
C1orf149
37730.763
1p35.3-p33
C1orf159
1007.068
1p36.33
C1orf38
28071.642
1p35.3
C4BPA
205344.230
1q32
CA6
8928.509
1p36.2
CABC1
225194.561
1q42.13
CACNA1E
179719.339
1q25-q31
CACYBP
173235.515
1q24-q25
CAMK1G
207823.668
1q32-q41
CAMK2N1
20681.472
1p36.12
CAMTA1
6767.971
1p36.31-p36.23
CAPN2
221966.742
1q41-q42
CAPN9
228949.784
1q42.11-q42.3
CAPZB
19537.860
1p36.1
CASZ1
10619.253
1p36.22
CCDC18
93418.508
1p22.1
CCT3
154545.376
1q23
CD160
144407.155
1q21.1
CD1A
156490.551
1q22-q23
CD1C
156526.187
1q22-q23
CD1D
156416.361
1q22-q23
CD2
117098.609
1p13
CD244
159066.574
1q23.3
CD247
165666.508
1q22-q23
CD34
206126.507
1q32
CD46
205992.025
1q32
CD48
158915.162
1q21.3-q22
CD52
26516.998
1p36
CD55
205561.488
1q32
CD58
116858.680
1p13
CDA
20788.031
1p36.2-p35
CDC14A
100590.611
1p21
CDC20
43597.213
1p34.1
CDC2L1
1560.963
1p36.33
CDC2L2
1624.030
1p36.33
CDC42
22251.707
1p36.1
CDC42BPA
225244.190
1q42.11
CDC7
91739.032
1p22
CDCA8
37930.746
1p34.3
CDKN2C
51208.230
1p32
CEP350
178190.531
1p36.13-q41
CFH
194887.764
1q32
CHD1L
145180.915
1q12
CHD5
150997.130
3q13
CHI3L1
201414.682
1q32.1
CHIT1
201452.418
1q31-q32
CITED4
41099.316
1p34.2|1p35-p34
CKS1B
153213.838
1q21.2
CLCA1
86707.114
1p31-p22
CLCA2
86662.413
1p31-p22
CLCN6
11788.794
1p36
CLCNKA
16221.073
1p36
CLIC4
24944.435
1p36.11
CLK2
153499.284
1q21
CLSPN
35974.407
1p34.2
CNKSR1
26376.590
1p36.11
CNR2
24073.048
1p36.11
CNTN2
203278.963
1q32.1
COL9A2
40538.750
1p33-p32
COPA
158525.001
1q23-q25
CPSF3L
1236.828
1p36.33
CR1
205736.096
1q32
CRABP2
154936.030
1q21.3
CREB3L4
152207.021
1q21.3
CREG1
165776.877
1q24
CRNN
150648.343
1q21
CRP
157948.704
1q21-q23
CSF1
110254.980
1p21-p13
CSF3R
36704.232
1p35-p34.3
CSRP1
199719.283
1q32
CTNNBIP1
9830.921
1p36.22
CTPS
41217.594
1p34.1
CTRC
15637.525
1p36.21
CTSE
204484.082
1q31
CTSK
149035.311
1q21
CYP2J2
60131.569
1p31.3-p31.2
CYP3A
60131.571
7q21.3-q22.1
CYP4A11
47167.433
1p33
CYP4B1
47037.257
1p34-p12
CYP4Z1
47305.747
1p33
CYR61
85819.048
1p31-p22
DAP3
153925.498
1q21-q22
DARC
157441.134
1q21-q22
DCLRE1B
114249.561
1p13.2
DDEFL1
23627.643
1p36.12
DDOST
20850.847
1p36.1
DDR2
160868.852
1q23.3
DDX20
112099.777
1p21.1-p13.2
DENND2D
111531.324
1p13.3
DFFA
10443.192
1p36.3-p36.2
DFFB
3763.705
1p36.3
DHCR24
55087.888
1p33-p31.1
DHX9
181075.074
1q25
DIO1
54132.449
1p33-p32
DIRAS3
68284.235
1p31
DISC1
229829.184
1q42.1
DKFZp566H0824
8363.007
1p36.23
DLEU2L
63787.238
1p31-p22
DMAP1
44451.712
1p34
DNAJB4
78243.224
1p31.1
DNAJC11
6616.818
1p36.31
DNAJC16
15725.939
1p36.1
DNAJC6
65503.018
1pter-q31.3
DNALI1
37795.107
1p35.1
DPYD
97315.888
1p22
DUSP10
219941.389
1q41
DVL1
1260.521
1p36
DYRK3
204875.504
1q32.1
E2F2
23705.509
1p36
ECE1
21417.664
1p36.1
ECM1
148747.207
1q21
EDG1
101475.043
1p21
EDG7
85052.089
1p22.3-p31.1
EDN2
41717.036
1p34
EFNA1
153366.973
1q21-q22
EIF3I
32460.558
1p34.1
EIF4G3
21005.563
1p36.12
ELA3A
22200.736
1p36.12
ELAVL4
50347.225
1p34
ELF3
200243.696
1q32.2
ELK4
203855.021
1q32
ENAH
223741.157
1q42.12
ENO1
8843.650
1p36.3-p36.2
EPB41
29086.215
1p33-p32
EPHA10
37954.233
1p34.3
EPHA2
16323.420
1p36
EPHA8
22762.591
1p36.12
EPHB2
22909.918
1p36.1-p35
EPHX1
224079.599
1q42.1
ERMAP
43063.836
1p34.2
ERRFI1
7994.382
1p36
ESRRG
214743.211
1q41
ETV3
155369.602
1q21-q23
ETV3L
155328.460
1q23.1
EVI5
92746.842
1p22.1
EXO1
240078.158
1q42-q43
EXTL1
26220.858
1p36.1
EXTL2
101110.529
1p21
F11R
159232.608
1q21.2-q21.3
F3
94767.461
1p22-p21
F5
167747.816
1q23
FABP3
31610.687
1p33-p32
FAF1
50679.523
1p33
FAIM3
205144.354
1q32.1
FAM129A
183026.791
1q25
FAM5C
188333.420
1q31.1
FASLG
170894.808
1q23
FBLIM1
15964.046
1p36.21
FBXO42
16449.147
1p36.23-p36.11
FBXO6
11646.768
1p36.23-p36.11
FCER1A
157526.128
1q23
FCGR2A
159741.844
1q23
FCGR3A
159778.175
1q23
FCGR3B
159859.612
1q23
FCRL4
155810.164
1q21
FCRL5
155749.791
1q21
FCRLA
159943.386
1q23.3
FDPS
153546.201
1q22
FGR
27811.389
1p36.2-p36.1
FLVCR1
211098.220
1q32.3
FMO1
169484.287
1q23-q25
FMO3
169326.660
1q23-q25
FMO4
169550.110
1q23-q25
FMO5
145124.462
1q21.1
FMOD
201576.376
1q32
FOXD2
47674.276
1p34-p32
FOXD3
63561.318
1p32-p31
FOXE3
47654.331
1p32
FOXJ3
42414.798
1pter-q31.3
FRAP1
11089.180
1p36.2
FUCA1
24044.161
1p34
FUSIP1
24168.160
1p36.11
G0S2
207915.388
1q32.2-q41
GADD45A
67923.471
1p31.2-p31.1
GALE
23994.676
1p36-p35
GBP2
89345.898
1p22.2
GBP5
89498.853
1p22.2
GCLM
94125.178
1p22.1
GDAP2
118213.563
1p12
GFI1
92712.910
1p22
GJA4
35031.186
1p35.1
GLRX2
191332.223
1q31.2-q31.3
GLUL
180618.292
1q31
GNAI3
109892.824
1p13
GNAT2
109947.413
1p13.1
GNB1
1706.590
1p36.33
GNG12
67939.737
1p31.3
GNG4
233777.608
1q42.3
GNG5
84736.680
1p22
GNRHR2
144225.777
1q12
GPA33
165288.706
1q24.1
GPSM2
109221.350
1p13.3
GPX7
52840.632
1p32
GSTM1
110031.965
1p13.3
GSTM2
110012.214
1p13.3
GSTM3
110078.077
1p13.3
GSTM4
110000.226
1p13.3
GSTM5
110056.388
1p13.3
GUCA2A
42400.949
1p35-p34
H6PD
9217.450
1p36
HBXIP
110745.402
1p13.3
HCRTR1
31857.228
1p33
HDAC1
32530.295
1p34
HDGF
154978.526
1q21-q23
HECTD3
45240.807
1p34.1
HEJ1
102110.154
1p22
HES2
6397.883
1p36.31-p36.11
HES4
924.208
1p36.33
HES5
2450.044
1p36.32
HHAT
208568.920
1q32
HHCM
227473.504
8q24.3
HIPK1
114298.022
1p13.2
HIST2H2AB
148125.644
1q21
HIST2H3A
148090.805
1q21.2
HIST3H3
226679.169
1q42
HMGN2
26671.489
1p36.1
HNRNPR
23508.863
1p36.12
HNRNPU
243080.225
1q44
HSD11B1
207926.173
1q32-q41
HSD17B7
161027.120
1q23
HSD3B1
119851.349
1p13.1
HSD3B2
119759.296
1p13.1
HSP90B3P
91873.155
1p22.2
HSPA6
159760.660
1q23
HSPB7
16213.112
1p36.23-p34.3
HSPC157
22224.613
1p36.12
HSPG2
22021.324
1p36.1-p34
HTR1D
23390.976
1p36.3-p34.3
HYI
43689.416
1p34.2
ID3
23756.996
1p36.13-p36.12
IER5
179324.261
1q25.3
IFI16
157246.306
1q22
IGHJ@
85819.005
14q32.32-q32.33
IGSF8
158327.754
1q23.1
IKBKE
204710.419
1q32.1
IL10
205007.571
1q31-q32
IL12RB2
67545.635
1p31.3-p31.2
IL20
205105.777
1q32
IL23R
67404.757
1p31.3
IL24
205137.412
1q32
IL6R
152644.293
1q21
INPP5B
38098.956
1p34
INSRR
155077.290
1q21-q23
IQCC
32443.859
1p36.11-p34.2
ISG15
938.742
1p36.33
ITGA10
144236.347
1q21
ITGB3BP
63679.050
1p31.3
ITLN1
159112.956
1q22-q23.5
ITPKB
224886.015
1q42.13
JAK1
65071.495
1p32.3-p31.3
JARID1B
200963.156
1q32.1
JMJD2A
43888.384
1p34.1
JMJD4
225985.558
1q42.13
JST
150997.130
-
JTB
152213.369
1q21
KCNA3
111015.833
1p13.3
KCND3
112119.977
1p13.3
KCNJ9
158317.984
1q21-q23
KCTD3
213807.358
1q41
KHDRBS1
32252.078
1p32
KIAA0090
19417.172
1p36.13
KIAA0562
3721.204
1p36.32
KIAA1245
143309.866
1q21.2
KIAA1324
109458.056
1p13.3
KIF1B
10193.418
1p36.2
KIF2C
44978.138
1p34.1
KISS1
202426.093
1q32
KLHL21
6573.372
1p36.31
LAMB3
207854.841
1q32
LAMC1
181259.218
1q31
LAMC2
181421.797
1q25-q31
LEFTY1
224140.606
1q42.1
LEFTY2
224190.927
1q42.1
LEMD1
203617.136
1q32.1
LEPR
65658.906
1p31
LEPRE1
42984.633
1p34.1
LGALS8
234753.362
1q42-q43
LHX4
178466.065
1q25.2
LIN28
26609.856
1p36.11
LIN9
224485.488
1q42.12
LMNA
154351.085
1q21.2-q21.3
LMO4
87566.739
1p22.3
LNCR1
150997.130
6q23-q25
LOC390998
6226.232
1p36.22
LOC91219
152231.790
22q11.22
LRRC8D
90060.101
1p22.2
LRRN2
202852.928
1q32.1
LSL
201541.287
2p21
MAD2L2
11657.125
1p36
MAGI3
113734.998
1p12-p11.2
MAP3K6
27554.257
1p36.11
MAPBPIP
154291.229
1q22
MAPKAPK2
204924.912
1q32
MARCKSL1
32572.028
1p35.1
MASP2
11027.443
1p36.3-p36.2
MCL1
148813.661
1q21
MDM4
202752.134
1q32
MED18
28528.136
1p35.3
MEF2D
154700.144
1q12-q23
MEX3A
154308.428
1q22
MFAP2