Atlas of Genetics and Cytogenetics in Oncology and Haematology

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Chromosome 10

Chromosome 10 : G-banding, diagram and R-banding - Claude Léonard, Jean-Loup Huret

Leukaemia     

t(5;10)(q33;q21)
t(7;10)(q34;q24)
t(X;10)(p10;p10)
+10 or trisomy 10 (solely)
t(10;11)(p12;q23)
t(10;11)(p11.2;q23)
t(10;11)(p13;q21)
t(10;11)(q22;q23)
t(10;11)(q25;p15)
t(10;14)(q24;q11)
t(10;14)(q24;q11)/NHL (T-ALL; NFKB2 and TCRA-D, not rare)
t(10;14)(q24;q32) (B-NHL; NFKB2 and IGH; rare)
t(10;16)(q22;p13)

Solid Tumors     

inv(10)(q11;q21)
t(10;17)(q11;q23)
t(10;17)(q22;p13)

Cancer prone diseases     

Bannayan-Riley-Ruvalcaba syndrome
Cowden Disease
Hereditary breast cancer
Lhermitte-Duclos disease

All Genes by Location (Kb)
Chromosome 10 by location

Losses / Amplicons     

BONE/SOFT TISSUE

External links     

  • Chromosome 10 - HUGO Chromosomes
  • Chromosome 10 - GoldenPath - Santa Cruz
  • Chromosome 10 - Ensembl Project
  • Chromosome 10 - Map View - NCBI
  • Chromosome 10 - GDB (Genome Data Base)
  • Chromosome 10 - OMIM Gene map
  • Chromosome 10 - Genomic Variants
  • Chromosome 10 - HAPMAP Project
  • Chromosome 10 - Genome Channel - ORNL
  • Chromosome 10 - LaunchPad HGMIS
  • Chromosome 10 - Human Protein Atlas
  • Chromosome 10 - SpliceNest
  • Human BAC Resource (NCBI)
  • FISH-mapped BACs (CCAP)
  • Genetic Maps (CHLC)
  • YACs mapped by FISH (Bari)
  • PCP (Partial Chromosome Paints) (Bari)
  • Positional Cloning Project (Berlin Dahlem)
  • Mouse homology - OMIM - NCBI
  • Cancer GeneWeb
  • GeneCards (Weizmann)
  • Human Proteomics Initiative (Expasy)

    • Genes

    Annotated genes
    SymbolLocation (Kb)Location (pter-qter)
    ABI1 27075.533 10p11.2
    ADD3 111757.701 10q24.2-q24.3
    AKR1C3 5126.568 10p15-p14
    ALOX5 45189.635 10q11.2
    BAG3 121400.872 10q25.2-q26.2
    BNIP3 133631.194 10q26.3
    CCDC6 61218.527 10q21
    DKK1 53744.047 10q11.2
    DMBT1 124310.171 10q25.3-q26.1
    ERCC6 50336.715 10q11.23
    KLF6 3811.241 10p15
    LDB1 103857.317 10q24-q25
    LGI1 95507.668 10q24
    LOXL4 99997.433 10q24
    MAPK8 49279.693 10q11.22
    MLLT10 21863.108 10p12
    MXI1 111975.752 10q24-q25
    MYST4 76256.385 10q22.2
    NFKB2 104144.329 10q24
    PAX2 102495.458 10q24
    PDCD4 112621.586 10q24
    PSAP 73246.062 10q21-q22
    PTEN 89613.175 10q23.3
    RET 42892.523 10q11.2
    SNCG 88708.393 10q23.2-q23.3
    Other genes
    possibly implicated
    in cancer
    SymbolLocation (Kb)Location (pter-qter)
    ABCC2 101532.493 10q24
    ABLIM1 116180.860 10q25
    ACTA2 90684.813 10q23.3
    ACTR1A 104228.977 10q24.32
    ADAM12 127719.904 10q26.3
    ADAM8 134925.912 10q26.3
    ADAMTS14 72102.565 10q21
    ADK 75580.971 10q22|10q11-q24
    ADRB1 115793.796 10q24-q26
    AIFM2 71542.036 10q22.1
    AKR1C1 4995.454 10p15-p14
    AKR1C2 5021.966 10p15-p14
    AKR1CL2 4858.402 10p15.1
    ANK3 61458.166 10q21
    ANKRD2 99322.246 10q23.31-q23.32
    ANKRD30A 37454.791 10p11.21
    ANXA7 74805.210 10q21.1-q21.2
    ANXA8 47875.231 10q11.22
    ANXA8L2 47216.926 10q11.22
    APBB1IP 26767.272 10p12.1
    ARHGAP12 32135.231 10pter-cen
    ARHGAP19 98971.921 10q24.1
    ARHGAP21 24912.551 10p12.1|10p12.3
    ARHGAP22 49324.086 10q11.22
    ARL3 104423.479 10q23.3
    ARMC3 23256.966 10p12.31
    ARMETL1 14901.257 10p13
    AS3MT 104619.200 10q24.32
    ASCC1 73526.284 10pter-q25.3
    BAMBI 29006.430 10p12.3-p11.2
    BCCIP 127502.105 10q26.1
    BLNK 97941.453 10q23.2-q23.33
    BMI1 22650.146 10p11.23
    BMPR1A 88506.376 10q22.3
    BRWD2 122600.685 10q26
    BTAF1 93673.716 10q22-q23
    BTRC 103103.815 10q24.32
    BUB3 124903.860 10q26
    C10orf118 115871.964 10q25.3
    C10orf97 15860.181 10p13
    CAMK1D 12431.589 10p13
    CAMK2G 75242.265 10q22
    CASC2 119796.508 10q26.11
    CASP7 115429.416 10q25
    CCAR1 70150.977 10q21.3
    CDC2 62209.917 10q21.1
    CEP55 95246.399 10q23.33
    CHUK 101938.115 10q24-q25
    CNC 101532.493 2p16
    COL17A1 105781.036 10q24.3
    COX15 101461.594 10q24
    CPN1 101792.055 10q24.2
    CSTF2T 53125.253 10q11
    CTBP2 126666.408 10q26.13
    CTNNA3 67349.937 10q22.2
    CUEDC2 104172.992 10q24.32
    CUGBP2 11087.265 10p13
    CUL2 35338.814 10p11.21
    CUZD1 124581.665 10q26.13
    CXCL12 44191.372 10q11.1
    CYP17A1 104580.280 10q24.3
    CYP2C18 96433.368 10q24
    CYP2C19 96512.453 10q24.1-q24.3
    CYP2C8 96786.520 10q23.33
    CYP2C9 96688.430 10q24
    CYP2E1 135190.857 10q24.3-qter
    DCLRE1A 115584.474 10q25.1
    DCLRE1C 14988.879 10p13
    DDIT4 73703.683 10pter-q26.12
    DDX21 70385.898 10q21
    DEC 112669.357 10q26
    DHX32 127514.899 10q26.2
    DLG5 79220.557 10q23
    DNAJB12 73762.594 10q22.1
    DNAJC1 22085.484 10p12.31
    DNAJC12 69240.974 10q22.1
    DNAJC9 74672.590 10q22.2
    DNMBP 101625.324 10q24.2
    DNTT 98054.075 10q23-q24
    DOCK1 128584.013 10q26.13-q26.3
    DUSP5 112247.615 10q25
    EBF3 131523.537 10q26.3
    EGR2 64241.763 10q21.1
    EIF3A 120784.532 10q26
    EMX2 119291.946 10q26.1
    EPC1 32597.865 10p11
    ERCM1 50336.715 -
    FAS 90740.268 10q24.1
    FBXO18 5972.220 10p15.1
    FER1L3 95056.176 10q24
    FGF8 103519.877 10q24
    FGFR2 123227.846 10q26
    FLJ46361 124506.199 10q26.13
    FRAT1 99069.012 10q24.1
    FRAT2 99082.245 10q24.1
    FRMD4A 13725.713 10p13
    FZD8 35967.183 10p11.21
    GAD2 26545.600 10p11.23
    GATA3 8136.673 10p15
    GDF10 48045.795 10q11.22
    GDF2 48033.098 10q11.22
    GDI2 5847.193 10p15
    GFRA1 117812.943 10q26
    GOT1 101146.618 10q24.1-q25.1
    GRID1 87349.292 10q22
    GSTO2 106018.621 10q25.1
    GTPBP4 1024.349 10p15-p14
    HECTD2 93160.082 10q23.32
    HELLS 96295.564 10q24.2
    HERC4 69351.662 10q21.3
    HHEX 94439.661 10q23.33
    HIF1AN 102285.631 10q24
    HK1 70745.576 10q22
    HNRPF 43201.071 10q11.21-q11.22
    HPSE2 100208.867 10q23-q24
    HPV18I1 100165.945 8q24
    HPV18I2 100165.945 12q13
    HPV6AI1 100165.945 14q21.1
    HPVC1 100165.945 7p14-p13
    HSPA12A 118420.693 10q26.12
    HSPA14 14920.267 10p13
    HTRA1 124211.047 10q26.3
    IDE 94203.580 10q23-q25
    IFIT2 91051.686 10q23-q25
    IFN1@ 91077.811 9p22
    IL15RA 6034.341 10p15-p14
    IL2RA 6093.512 10p15-p14
    INPP5A 134201.343 10q26.3
    INPP5F 121475.599 10q26.11
    ITGA8 15599.094 10p13
    ITGB1 33236.245 10p11.2
    ITIH5 7641.641 10p14
    JMJD1C 64596.996 10q21.2
    KCNMA1 78314.642 10q22.3
    KIF11 94342.971 10q24.1
    KIF5B 32340.077 10pter-q22.1
    KIN 7837.374 10p15-p14
    KNDC1 134823.961 10q26.3
    LZTS2 102746.955 10q24
    MAGEA9B 93555.783 Xq28
    MAP3K8 30762.872 10p11.23
    MAPK6PS6 50557.690 10q11.23
    MARCH5 94040.900 10q23.32
    MASTL 27484.298 10p12.1
    MBL2 54195.147 10q11.2-q21
    MCM10 13243.587 10p13
    MGEA5 103534.199 10q24.1-q24.3
    MGMT 131155.456 10q26
    MINPP1 89254.633 10q23
    MKI67 129784.914 10q25-qter
    MMP21 127445.016 10q26.2
    MMS19 99208.071 10q24-q25
    MRC1 18138.358 10p12.33
    MSMB 51219.559 10q11.2
    MSRB2 23424.433 10p12
    MYO3A 26263.008 10p11.1
    MYPN 69539.256 10q21.3
    NANOS1 120779.218 10q26.11
    NCOA4 51242.373 10q11.2
    NDUFB8 102273.488 10q23.2-q23.33
    NET1 5478.546 10p15
    NEURL 105244.038 10q25.1
    NMT2 15187.777 10p13
    NODAL 71862.077 10q22.1
    NPSA 52034.591 -
    NRG3 83625.077 10q22-q23
    NRP1 33526.556 10p12
    NT5C2 104837.904 10q24.32-q24.33
    OLAH 15125.968 10p13
    OPTN 13182.088 10p13
    P4HA1 74436.988 10q21.3-q23.1
    PAOX 135042.731 10q26.3
    PARD3 34440.104 10p11.22-p11.21
    PARG 50696.333 10q11.23
    PCANAP8 134988.922 -
    PCGF5 92970.349 10q23.32
    PCGF6 105052.544 10q24.33
    PDCD11 105146.402 10q24.33
    PFKFB3 6284.901 10p14-p15
    PFKP 3099.752 10p15.3-p15.2
    PGAM1 99176.017 10q25.3
    PI4K2A 99390.433 10q24
    PIP4K2A 22863.772 10p12.2
    PLAU 75340.896 10q24
    PLCE1 95743.736 10q23
    PLEKHA1 124141.833 10q26.13
    PLXDC2 20145.378 10p12.32-p12.31
    POLL 103328.631 10q23
    PPP1R3C 93378.179 10q23-q24
    PPP2R2D 133597.950 10q26.3
    PPP3CB 74866.618 10q21-q22
    PPRC1 103882.777 10q24.32
    PRDX3 120917.206 10q25-q26
    PRF1 72027.110 10q22
    PRKCQ 6509.111 10p15
    PRKG1 52504.240 10q11.2
    PRLHR 120342.906 10q26.13
    PRTFDC1 25177.560 10p12.1
    PSD 104152.366 10q24
    PTPLA 17671.966 10p14-p13
    PTPRE 129735.824 10q26
    RAB18 27833.255 10p12.1
    RASGEF1A 43009.990 10q11.21
    RASSF4 44775.225 10q11.21
    RBM17 6171.013 10p15.1
    RBMXP1 43201.071 6p12.3
    RGR 85994.789 10q23
    RGS10 121249.330 10q25
    RHOBTB1 62299.206 10q21.2
    RPS24 79463.580 10q22-q23
    RSU1 16672.625 10p13
    SCD 102096.762 10q23-q24
    SEPHS1 13400.089 10p14
    SFRP5 99516.508 10q24.1
    SFTPA1B 81360.664 10q22.3
    SFTPA2B 80985.628 10q22.3
    SFTPD 81687.478 10q22.2-q23.1
    SGMS1 51735.352 10q11.2
    SGPL1 72245.722 10q21
    SH3PXD2A 105343.776 10q24.33
    SIRT1 69314.433 10q21.3
    SLC18A2 118990.706 10q25
    SLK 105717.460 10q25.1
    SMC3 112317.439 10q25
    SUFU 104253.754 10q24.32
    SUPV3L1 70609.999 10q22.1
    SUV39H2 14960.905 10p13
    TACC2 123913.095 10q26
    TCF7L2 114700.201 10q25.3
    TET1 69990.123 10q21
    TIAL1 121322.970 10q
    TIMM23 51262.096 10q11.21-q11.23
    TLX1 102880.252 10q24
    TNKS2 93548.049 10q23.3
    TRDMT1 17224.989 10p15.1
    TRIM8 104394.242 10q24.3
    UBE2D1 59764.745 10q11.2-q21
    UNC5B 72642.355 10q22.1
    VCL 75427.878 10q22.1-q23
    VENTX 134901.398 10q26.3
    VIM 17311.304 10p13
    VWA2 115989.008 10q25.3
    WAPAL 88184.993 10q23.2
    WNT8B 102212.802 10q24
    ZEB1 31648.148 10p11.2
    ZRANB1 126620.682 10q26.13
    ZWINT 57787.205 10q21-q22

    GeneCards   GDB - List of genes

    This page should be referenced as such :
    Dessen P, Knuutila S, Huret JL Chromosome 10. Atlas Genet Cytogenet Oncol Haematol. 2002.
    URL : http://AtlasGeneticsOncology.org/Indexbychrom/idxa_10.html
    © Atlas of Genetics and Cytogenetics in Oncology and Haematology
    indexed on : Fri May 16 20:24:10 2008
    Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case reports   Journals   Portal   Teaching   

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