Atlas of Genetics and Cytogenetics in Oncology and Haematology

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Chromosome 10

Chromosome 10 : G-banding, diagram and R-banding - Claude Léonard, Jean-Loup Huret
Chromosome 10 diagrams ISCN 2009 - Courtesy Nicole Chia

Leukaemia     

t(5;10)(q33;q21)
t(7;10)(q34;q24)
t(X;10)(p10;p10)
+10 or trisomy 10 (solely)
t(10;11)(p13;q21)
t(10;11)(p11.2;q23)
t(10;11)(q22;q23)
t(10;11)(q25;p15)
t(10;11)(p12;q23)
t(10;12)(q24;p13)
t(10;14)(q24;q11)
t(10;14)(q24;q11)/NHL (T-ALL; NFKB2 and TCRA-D, not rare)
t(10;14)(q24;q32) (B-NHL; NFKB2 and IGH; rare)
t(10;16)(q22;p13)

Solid Tumors     

inv(10)(q11q11)
inv(10)(q11;q21)
t(10;17)(q11;q23)
t(10;17)(q22;p13)

Cancer prone diseases     

Bannayan-Riley-Ruvalcaba syndrome
Cowden disease
Hereditary breast cancer
Lhermitte-Duclos disease
Proteus syndrome

All Genes by Location (Kb)
Chromosome 10 by location

Losses / Amplicons     

BONE/SOFT TISSUE

External links     

  • Chromosome 10 - HUGO Chromosomes
  • Chromosome 10 - GoldenPath - Santa Cruz
  • Chromosome 10 - Ensembl Project
  • Chromosome 10 - Map View - NCBI
  • Chromosome 10 - OMIM Gene map
  • Chromosome 10 - Genomic Variants
  • Chromosome 10 - HAPMAP Project
  • Chromosome 10 - Genome Channel - ORNL
  • Chromosome 10 - LaunchPad HGMIS
  • Chromosome 10 - Human Protein Atlas
  • Chromosome 10 - Array BAC clone - Roswell Park Cancer Institute
  • Chromosome 10 - Human BAC Resource (NCBI)
  • Chromosome 10 FISH-mapped BACs (CCAP)
  • Genetic Maps (CHLC)
  • YACs mapped by FISH (Bari)
  • PCP (Partial Chromosome Paints) (Bari)
  • Mouse homology - OMIM - NCBI
  • Chromosome 10 Cancer GeneWeb
  • Chromosome 10 GeneCards (Weizmann)
  • Human Proteomics Initiative (Expasy)

    • Genes

    Annotated genes
    Ordered by Name Ordered by Location
     Kb pter-qter
    ABI1 27035.527 10p11.2
    ADAM12 127702.902 10q26.3
    ADD3 111767.711 10q24.2-q24.3
    AIFM2 71872.030 10q22.1
    AKR1C3 5136.568 10p15-p14
    ALOX5 45869.629 10q11.2
    BAG3 121410.882 10q25.2-q26.2
    BMI1 22610.006 10p11.23
    BNIP3 133781.204 10q26.3
    BTRC 103113.825 10q24.32
    CCDC6 61548.522 10q21
    DKK1 54074.041 10q11.2
    DMBT1 124320.181 10q26.13
    ERCC6 50664.492 10q11.23
    FGFR2 123237.845 10q26
    KLF6 3818.189 10p15
    LDB1 103867.327 10q24-q25
    LGI1 95517.566 10q24
    LOXL4 100007.443 10q24
    MAPK8 49609.687 10q11.22
    MLLT10 21823.574 10p12
    MRC1 17851.362 10p12.33
    MXI1 111969.989 10q24-q25
    MYST4 76586.379 10q22.2
    NCOA4 51565.108 10q11.2
    NET1 5454.518 10p15
    NFKB2 104154.229 10q24
    PAX2 102505.468 10q24
    PDCD4 112631.596 10q24
    PSAP 73576.056 10q21-q22
    PTEN 89623.195 10q23.3
    RET 43572.517 10q11.2
    RHOBTB1 62629.200 10q21.2
    SIRT1 69644.939 10q21.3
    SNCG 88718.288 10q23.2-q23.3
    Other genes
    possibly implicated
    in cancer
    Ordered by Name Ordered by Location
     Kb pter-qter
    ABCC2 101542.463 10q24
    ABLIM1 116190.870 10q25
    ACSL5 114135.956 10q25.1-q25.2
    ACTA2 90694.832 10q23.3
    ACTR1A 104238.987 10q24.32
    ADAM8 135075.921 10q26.3
    ADAMTS14 72432.559 10q21
    ADK 75936.444 10q22|10q11-q24
    ADRB1 115803.806 10q24-q26
    AKR1C1 5005.454 10p15-p14
    AKR1C2 5042.105 10p15-p14
    AKR1E2 4868.402 10p15.1
    ANK3 61788.160 10q21
    ANKRD1 92671.857 10q23.31
    ANKRD2 99332.256 10q23.31-q23.32
    ANKRD30A 37414.785 10p11.21
    ANXA11 81914.880 10q23
    ANXA7 75135.189 10q21.1-q21.2
    ANXA8 48255.225 10q11.22
    ANXA8L2 47746.920 10q11.22
    APBB1IP 26727.266 10p12.1
    ARHGAP12 32095.225 10pter-cen
    ARHGAP19 98981.931 10q24.1
    ARHGAP21 24872.538 10p12.1|10p12.3
    ARHGAP22 49654.080 10q11.22
    ARL3 104433.490 10q23.3
    ARMC3 23216.954 10p12.31
    AS3MT 104629.210 10q24.32
    ASCC1 73856.278 10pter-q25.3
    BAMBI 28966.424 10p12.3-p11.2
    BCCIP 127512.104 10q26.1
    BLNK 97951.463 10q23.2-q23.33
    BLOC1S2 102033.713 10q24.31
    BMPR1A 88516.396 10q22.3
    BTAF1 93683.736 10q22-q23
    BUB3 124913.760 10q26
    C10orf116 88728.188 10q23.2
    C10orf118 115881.974 10q25.3
    CAMK1D 12391.583 10p13
    CAMK2G 75572.259 10q22
    CASP7 115439.426 10q25
    CCAR1 70480.971 10q21.3
    CCNY 35625.801 10p11.21
    CDK1 62538.089 10q21.1
    CDNF 14861.251 10p13
    CELF2 11206.993 10p13
    CEP55 95256.369 10q23.33
    CHAT 50822.083 10q11.2
    CHUK 101948.125 10q24-q25
    COL17A1 105791.048 10q24.3
    COX15 101468.507 10q24
    CPN1 101802.065 10q24.2
    CSTF2T 53455.247 10q11
    CTBP2 126676.419 10q26.13
    CTNNA3 67679.725 10q22.2
    CUEDC2 104183.002 10q24.32
    CUL2 35298.808 10p11.21
    CUZD1 124591.675 10q26.13
    CXCL12 44865.607 10q11.1
    CYP17A1 104590.290 10q24.3
    CYP26A1 94833.647 10q23-q24
    CYP2C18 96443.251 10q24
    CYP2C19 96522.463 10q24.1-q24.3
    CYP2C8 96796.530 10q23.33
    CYP2C9 96698.415 10q24
    CYP2E1 135340.867 10q24.3-qter
    DCLRE1A 115594.484 10q25.1
    DCLRE1C 14948.873 10p13
    DDIT4 74033.677 10pter-q26.12
    DDX21 70715.892 10q21
    DHX32 127524.909 10q26.2
    DLG5 79550.551 10q23
    DNA2 70173.822 10q21.3-q22.1
    DNAJB12 74092.588 10q22.1
    DNAJC1 22045.478 10p12.31
    DNAJC12 69556.428 10q22.1
    DNAJC9 75002.584 10q22.2
    DNMBP 101635.334 10q24.2
    DNTT 98064.085 10q23-q24
    DOCK1 128594.023 10q26.13-q26.3
    DUSP5 112257.625 10q25
    DUX4 135480.369 4q35
    EBF3 131633.547 10q26.3
    EGR2 64571.760 10q21.1
    EIF3A 120794.542 10q26
    EMX2 119301.956 10q26.1
    EPC1 32557.859 10p11
    FAM188A 15820.175 10p13
    FAS 90750.288 10q24.1
    FBXO18 5936.349 10p15.1
    FGF8 103529.887 10q24
    FLJ46361 124516.209 10q26.13
    FRAT1 99079.022 10q24.1
    FRAT2 99092.254 10q24.1
    FRMD4A 13685.707 10p13
    FZD8 35927.177 10p11.21
    GAD2 26505.236 10p11.23
    GATA3 8096.667 10p15
    GDF10 48425.790 10q11.22
    GDF2 48413.092 10q11.22
    GDI2 5807.187 10p15
    GFRA1 117816.444 10q26.11
    GHITM 85899.185 10q23.1
    GLRX3 131934.663 10q26
    GOT1 101156.628 10q24.1-q25.1
    GRID1 87359.312 10q22
    GSTO1 106014.678 10q25.1
    GSTO2 106028.631 10q25.1
    GTPBP4 1034.349 10p15-p14
    H2AFY2 71812.357 10q22
    HECTD2 93170.096 10q23.32
    HELLS 96305.574 10q24.2
    HERC4 69681.657 10q21.3
    HHEX 94449.681 10q23.33
    HIF1AN 102295.641 10q24
    HK1 71078.603 10q22
    HNRNPF 43881.065 10q11.21-q11.22
    HPSE2 100216.835 10q23-q24
    HSPA12A 118430.704 10q26.12
    HSPA14 14880.261 10p13
    HTRA1 124221.041 10q26.3
    IDE 94211.441 10q23-q25
    IFIT2 91061.706 10q23-q25
    IL15RA 5994.335 10p15-p14
    IL2RA 6052.657 10p15-p14
    INA 105036.920 10q24.33
    INPP5A 134351.353 10q26.3
    INPP5F 121485.609 10q26.11
    ITGA8 15559.088 10p13
    ITGB1 33189.248 10p11.2
    ITIH2 7745.236 10p15
    ITIH5 7613.368 10p14
    JMJD1C 64926.990 10q21.3
    KCNMA1 78629.359 10q22.3
    KIF11 94352.825 10q24.1
    KIF5B 32297.940 10pter-q22.1
    KILLIN 89618.919 10q23
    KIN 7797.368 10p15-p14
    KNDC1 134973.971 10q26.3
    LBX1 102986.734 10q24
    LDB3 88428.426 10q22.3-q23.2
    LIPF 90424.094 10q23.31
    LZTS2 102756.965 10q24
    MAP3K8 30722.866 10p11.23
    MARCH5 94050.920 10q23.32-q23.33
    MARVELD1 99473.465 10q24.2
    MASTL 27443.753 10p12.1
    MBL2 54525.141 10q11.2-q21
    MCM10 13203.581 10p13
    MGEA5 103544.200 10q24.1-q24.3
    MGMT 131265.454 10q26
    MINPP1 89264.223 10q23
    MKI67 129894.927 10q25-qter
    MMP21 127455.028 10q26.13
    MMS19 99218.083 10q24-q25
    MSMB 51549.553 10q11.2
    MSRB2 23384.427 10p12
    MYO3A 26223.002 10p11.1
    MYOF 95066.187 10q24
    MYPN 69869.250 10q21.3
    NANOS1 120789.228 10q26.11
    NDUFB8 102283.497 10q23.2-q23.33
    NEURL 105253.735 10q25.1
    NEUROG3 71331.792 10q21.3
    NMT2 15147.771 10p13
    NODAL 72191.692 10q22.1
    NOLC1 103911.933 10q24.32
    NPSA 52364.585 -
    NRG3 83635.070 10q22-q23
    NRP1 33486.547 10p12
    NT5C2 104845.940 10q24.32-q24.33
    OLAH 15085.895 10p13
    OPTN 13142.082 10p13
    P4HA1 74766.982 10q21.3-q23.1
    PAOX 135192.741 10q26.3
    PARD3 34400.098 10p11.21
    PARG 51026.327 10q11.23
    PCGF5 92980.369 10q23.32
    PCGF6 105062.554 10q24.33
    PDCD11 105156.412 10q24.33
    PFKFB3 6186.843 10p14-p15
    PFKP 3109.752 10p15.3-p15.2
    PGAM1 99186.027 10q25.3
    PGBD3 50723.151 10q11
    PI4K2A 99400.443 10q24
    PIP4K2A 22823.767 10p12.2
    PLAU 75670.862 10q24
    PLCE1 95848.830 10q23
    PLEKHA1 124134.220 10q26.13
    PLXDC2 20105.372 10p12.31
    PNLIPRP3 118187.424 10q25.3
    POLL 103338.639 10q23
    PPP1R3C 93388.201 10q23-q24
    PPP2R2D 133747.960 10q26.3
    PPP3CB 75196.564 10q21-q22
    PPRC1 103892.787 10q24.32
    PRDX3 120927.216 10q25-q26
    PRF1 72357.105 10q22
    PRKCQ 6469.105 10p15
    PRKG1 52750.945 10q11.2
    PRLHR 120352.916 10q26.13
    PRTFDC1 25137.554 10p12.1
    PSD 104162.376 10q24
    PTPLA 17631.960 10p14-p13
    PTPRE 129705.325 10q26
    RAB18 27793.249 10p12.1
    RASGEF1A 43689.984 10q11.21
    RASSF4 45455.219 10q11.21
    RBM17 6131.309 10p15.1
    RBP4 95351.594 10q23-q24
    RGR 86004.809 10q23
    RGS10 121259.340 10q25
    RPS24 79793.518 10q22-q23
    RSU1 16632.619 10p13
    SCD 102106.772 10q24.31
    SEPHS1 13360.083 10p14
    SFRP5 99526.510 10q24.1
    SFTPA1 81370.695 10q22.3
    SFTPA2 81315.609 10q22.3
    SFTPD 81697.498 10q22.2-q23.1
    SGMS1 52065.346 10q11.2
    SGPL1 72575.704 10q21
    SH3PXD2A 105353.784 10q24.33
    SHOC2 112679.301 10q25
    SLC18A2 119000.716 10q25
    SLIT1 98757.795 10q23.3-q24
    SLK 105727.470 10q24.33
    SMC3 112327.449 10q25
    SUFU 104263.764 10q24.32
    SUPV3L1 70939.993 10q22.1
    SUV39H2 14920.899 10p13
    TACC2 123923.105 10q26
    TCF7L2 114710.009 10q25.3
    TET1 70320.117 10q21
    TIAL1 121332.978 10q
    TIMM23 51592.090 10q11.23
    TLX1 102891.061 10q24
    TNKS2 93558.151 10q23.3
    TRDMT1 17184.983 10p15.1
    TRIM8 104404.252 10q24.3
    TSPAN14 82214.038 10q23.1
    UBE2D1 60094.739 10q11.2-q21
    UCN3 5406.976 10p15.1
    UNC5B 72972.298 10q22.1
    VCL 75757.872 10q22.2
    VENTX 135051.408 10q26.3
    VIM 17270.258 10p13
    VWA2 115999.018 10q25.3
    WAPAL 88195.014 10q23.2
    WDR11 122610.687 10q26
    WNT8B 102222.812 10q24
    ZEB1 31610.064 10p11.2
    ZMIZ1 80828.792 10q22.3
    ZRANB1 126630.692 10q26.13
    ZWINT 58117.199 10q21-q22

    GeneCards  

    Contributor(s)

    WrittenJul 2004Philippe Dessen, Sakari Knuutila, Jean-Loup Huret
    UpdatedJul 2010Jean-Loup Huret, Philippe Dessen

    Citation

    This paper should be referenced as such :
    Dessen P, Knuutila S, Huret JL . Chromosome . Atlas Genet Cytogenet Oncol Haematol. Jul 2004 .
    URL : http://AtlasGeneticsOncology.org/Indexbychrom/idxa_10.html
    Dessen P, Huret JL . Chromosome . Atlas Genet Cytogenet Oncol Haematol. Jul 2010 .
    URL : http://AtlasGeneticsOncology.org/Indexbychrom/idxa_10.html
    © Atlas of Genetics and Cytogenetics in Oncology and Haematology
    indexed on : Fri Jul 16 13:33:20 CEST 2010
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