Atlas of Genetics and Cytogenetics in Oncology and Haematology

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Chromosome 16

Chromosome 16 : G-banding, diagram and R-banding - Claude Léonard, Jean-Loup Huret

Leukaemia     

t(1;16)(q11;q11)
t(1;16)(q12;q24)
t(3;16)(q21;q22) (AML; -- and CBFB?; rare)
t(3;16)(q27;p11)
t(3;16)(q27;p13)
t(4;16)(q26;p13)
t(5;16)(q33;q22) (AML; - ; rare)
t(8;16)(p11;p13)
t(8;16)(p11;p13) in treatment related leukemia
t(10;16)(q22;p13)
del(16)(q22)
inv(16)(p13q22)
t(16;16)(p13;q22)
inv(16)(p13q22) in treatment related leukemia
t(16;21)(p11;q22)
t(16;21)(q24;q22)

Solid Tumors     

t((7;16)(q33;p11)
t(12;13)(q14;q12)
t(11;16)(q13;p13)
t(12;16)(q13;p11)
t(12;16)(q13;p11)
t(12;16)(q13;p11)
t(12;15)(p13;q26)
t(16;17)(q22;p13)
t(16;21)(p11;q22)

Cancer prone diseases     

Rubinstein-Taybi syndrome (RTS)

All Genes by Location (Kb)
Chromosome 16 by location

Losses / Amplicons     

BONE/SOFT TISSUE

External links     

  • Chromosome 16 - HUGO Chromosomes
  • Chromosome 16 - GoldenPath - Santa Cruz
  • Chromosome 16 - Ensembl Project
  • Chromosome 16 - Map View - NCBI
  • Chromosome 16 - GDB (Genome Data Base)
  • Chromosome 16 - OMIM Gene map
  • Chromosome 16 - Genomic Variants
  • Chromosome 16 - HAPMAP Project
  • Chromosome 16 - Genome Channel - ORNL
  • Chromosome 16 - LaunchPad HGMIS
  • Chromosome 16 - Human Protein Atlas
  • Chromosome 16 - SpliceNest
  • Human BAC Resource (NCBI)
  • FISH-mapped BACs (CCAP)
  • Genetic Maps (CHLC)
  • YACs mapped by FISH (Bari)
  • PCP (Partial Chromosome Paints) (Bari)
  • Positional Cloning Project (Berlin Dahlem)
  • Mouse homology - OMIM - NCBI
  • Cancer GeneWeb
  • GeneCards (Weizmann)
  • Human Proteomics Initiative (Expasy)

    • Genes

    Annotated genes
    SymbolLocation (Kb)Location (pter-qter)
    ABCC1 15950.935 16p13.1
    CBFA2T3 87468.768 16q24
    CBFB 65620.551 16q22.1
    CDH1 67328.696 16q22.1
    CIITA 10878.556 16p13
    CREBBP 3715.057 16p13.3
    EIF3C 28630.283 16p11.2
    ERCC4 13921.524 16p13.3-p13.11
    FANCA 88392.268 16q24.3
    FUS 31098.954 16p11.2
    MMP2 54070.589 16q13-q21
    MVP 29739.289 16p13.1-p11.2
    MYH11 15704.495 16p13.11
    NQO1 68300.806 16q22.1
    PLK1 23597.702 16p12.1
    RBL2 52025.901 16q12.2
    TSC2 2037.991 16p13.3
    WFDC1 82885.902 16q24.3
    WWOX 76691.052 16q23.3-q24.1
    ZFHX3 71374.289 16q22.3-q23.1
    Other genes
    possibly implicated
    in cancer
    SymbolLocation (Kb)Location (pter-qter)
    AAVS1 68843.798 19q13|19q13-qter
    ABCA3 2265.880 16p13.3
    ABCC11 46758.323 16q12.1
    ABCC6 16150.924 16p13.1
    ACD 66248.916 16q22.1
    ADAMTS18 75873.526 16q23
    ADCY7 48879.324 16q12-q13
    ALDOA 29984.545 16q22-q24
    AMFR 54952.866 16q21
    ANKRD11 87861.536 16q24.3
    APRT 87403.380 16q24
    AQP8 25135.786 16p12
    ARHGAP17 24838.215 16p12.1
    ATMIN 79626.959 16q23.2
    ATP2A1 28797.310 16p12.1
    AXIN1 277.441 16p13.3
    BCAR1 73820.430 16q22-q23
    BCAR4 11443.548 16p13.13
    BCKDK 31027.249 16p11.2
    BCL7C 30806.619 16p11
    BCPR 86421.131 17p13.3
    BFAR 14634.297 16p13.12
    BRD7 48910.442 16q12
    C16orf62 19474.541 16p12.3
    C1QTNF8 1078.227 16p13.3
    CACNA1H 1143.242 16p13.3
    CALB2 69950.127 16q22.2
    CCL17 55996.180 16q13
    CCL22 55950.219 16q13
    CCNF 2419.396 16p13.3
    CD19 28850.761 16p11.2
    CDH11 63538.186 16q22.1
    CDH13 81218.079 16q24.2-q24.3
    CDH15 87765.664 16q24.3
    CDH16 65499.527 16q22.1
    CDH3 67236.277 16q22.1
    CDH5 64958.064 16q22.1
    CDH8 60244.736 16q22.1
    CDK10 88280.579 16q24
    CDR2 22264.760 16p12.3
    CDT1 87397.687 16q24.3
    CES1 54394.267 16q13-q22.1
    CES2 65525.848 16q22.1
    CFDP1 73885.110 16q22.2-q22.3
    CHP2 23673.449 16p12.1
    CHST4 70117.562 16q22.3
    CHTF18 778.623 16p13.3
    CIAPIN1 56019.588 16q13-q21
    CLUAP1 3499.895 16p13.3
    COTL1 83156.707 16q24.1
    COX4I1 84390.697 16q22-qter
    COX6A2 31346.556 16p
    CPNE7 88169.677 16q24.3
    CSNK2A2 56749.317 16q21
    CTCF 66153.965 16q21-q22.3
    CTF1 30815.429 16p11.2-p11.1
    CTF8 67709.414 16q22.1
    CX3CL1 55963.915 16q13
    CYBA 87237.199 16q24
    CYLD 49333.530 16q12.1
    DDX19A 68938.325 16q22.1
    DDX19B 68890.573 16q22.1
    DDX28 66612.675 16q22.1
    DHODH 70600.144 16q22
    DHX38 70685.116 16q21-q22.3
    DNAJA2 45546.775 16q12.1
    DNAJA3 4415.883 16p13.3
    DPEP1 88214.501 16q24.3
    DYNLRB2 79132.355 16q23.3
    E2F4 65783.569 16q21-q22
    E4F1 2213.568 16p13.3
    EEF2K 22125.093 16p12.1
    ERN2 23609.127 16p12.2
    FA2H 73304.359 16q23
    FBXO31 85920.445 16q24.2
    FOXC2 85158.443 16q22-q24
    FOXF1 85101.634 16q24
    FOXL1 85169.616 16q24
    FUK 69045.999 16q22.1
    GAS8 88616.509 16q24.3
    GCF2 86421.131 -
    GFER 1974.151 16p13.3-p13.12
    GIYD2 30112.718 16p11.2
    GLG1 73043.357 16q22-q23
    GNAO1 54783.649 16q13
    GNG13 788.042 16p13.3
    GPR56 56220.042 16q12.2-q21
    GRIN2A 9762.923 16p13.2
    GSPT1 11874.040 16p13.1
    HAGH 1799.106 16p13.3
    HAS3 67697.661 16q22.1
    HMOX2 4466.447 16p13.3
    HP 70646.009 16q22.1
    HPCX 73820.429 Xq27-q28
    HS3ST2 22733.361 16p12
    HSAJ2425 70451.090 -
    HSD11B2 66022.537 16q22
    HSD17B2 80626.364 16q24.1-q24.2
    HYDIN 69398.790 16q22.2-q22.3
    IGFALS 1780.422 16p13.3
    IL17C 87232.502 16q24
    IL21R 27321.224 16p11
    IL27 28418.185 -
    IL4R 27232.752 16p12.1-p11.2
    ITGAD 31312.134 16p11.2
    ITGAL 30391.572 16p11.2
    ITGAM 31178.789 16p11.2
    ITGAX 31274.010 16p11.2
    LCAT 66531.288 16q22.1
    LITAF 11549.357 16p13.13
    LOC388248 28262.355 16p11.2
    MAF 78185.732 16q22-q23
    MAPK3 30032.927 16p11.2
    MAPK8IP3 1696.222 16p13.3
    MAZ 29725.356 16p11.2
    MBTPS1 82644.872 16|16q24
    MC1R 88512.527 16q24.3
    MKL2 14072.697 16p13.12
    MLKL 73263.262 16q22.3
    MMP15 56616.783 16q13-q21
    MMP25 3036.683 16p13.3
    MPG 67.018 16p13.3
    MRPL28 357.397 16p13.3
    MSLN 751.134 16p13.3
    MT1A 55230.079 16q13
    MT1F 55249.356 16q13
    MT1G 55258.154 16q13
    MT1H 55261.227 16q13
    MT2A 55200.012 16q13
    MT3 55180.768 16q13
    MYST1 31036.488 16p11.2
    Magmas 4330.254 16p13.3
    NDRG4 57079.161 16q21-q22.1
    NFAT5 68156.498 16q22.1
    NFATC3 66676.876 16q22.2
    NME3 1760.323 16q13
    NME4 387.193 16p13.3
    NOD2 49288.551 16q21
    NOL3 65765.371 16q21-q23
    NPC1 21152.517 4p15.1-q12
    NTHL1 2029.817 16p13.3
    NUP93 55321.608 16q13
    NUPR1 28456.163 16p11.2
    ORC6L 45281.059 16q12
    OSGIN1 82540.173 16q23.3
    PALB2 23521.984 16p12.1
    PDF 67920.025 16q22.1
    PDPK1 2527.971 16p13.3
    PHKG2 30667.238 16p12.1-p11.2
    PIGQ 560.005 16p13.3
    PKD1 2078.712 16p13.3
    PKMYT1 2962.795 16p13.3
    PLA2G10 14673.908 16p13.1-p12
    PLCG2 80370.431 16q24.1
    PPL 4872.509 16p13.3
    PPP4C 29994.885 16p12-p11
    PRDM7 88650.477 16q24.3
    PRKCB1 23754.823 16p11.2
    PRM2 11276.994 16p13.2
    PRSS21 2807.165 16p13.3
    PRSS8 31050.255 16p11.2
    PSKH1 66484.716 16q22.1
    PSMB10 66525.908 16q22.1
    PSMD7 72888.182 16q23-q24
    PYCARD 31120.310 16p12-p11.2
    RAB26 2138.652 16p13.3
    RAB40C 580.180 16p13.3
    RBBP6 24458.409 16p12.2
    RGS11 258.311 16p13.3
    RNF166 87290.410 16q24.3
    RNF40 30681.131 16p11.2-p11.1
    RPL13 88154.632 16q24.3|17p11.2
    RPS2 1952.063 16p13.3
    RRAD 65513.090 16q22
    RRN3 15061.382 16p12
    SEPT1 30296.958 16p11.1
    SEPX1 1928.235 16p13.3
    SEZ6L2 29790.332 16p11.2
    SF3B3 69115.202 16q22.1
    SIAH1 46951.955 16q12
    SLC12A3 55456.643 16q13
    SLC12A4 66535.731 16q22.1
    SLC5A2 31401.940 16p12-p11
    SLC6A2 54248.057 16q12.2
    SLC7A5 86421.131 16q24.3
    SLC9A3R2 2016.930 16p13.3
    SMG1 18723.677 16p12.3
    SPG7 88102.306 16q24.3
    SPN 29582.081 16p11.2
    SRCAP 30617.963 16p11.2
    SSTR5 1068.870 16p13.3
    STUB1 670.116 16p13.3
    SULT1A1 28524.419 16p12.1
    SULT1A2 28510.767 16p12.1
    TAOK2 29892.723 16p11.2
    TAT 70158.255 16q22.1
    TCEB2 2761.417 16p12.3
    TCF25 88467.527 16q24.3
    TERF2 67947.036 16q22.1
    TERF2IP 74239.185 16q23.1
    TGFB1I1 31392.027 16p11.2
    TK2 65100.853 16q22-q23.1
    TNFRSF12A 3010.361 16p13.3
    TNFRSF17 11966.465 16p13.1
    TP53TG3 33169.016 16p13
    TPSAB1 1230.679 16p13.3
    TRADD 65745.590 16q22
    TRAF7 2145.800 16p13.3
    TRAP1 3648.039 16p13.3
    TUBB3 88517.246 16q24.3
    UBE2I 1299.639 16p13.3
    USP7 8893.452 16p13.3
    VAC14 69278.845 16q22.1
    WWP2 68353.775 16q22.1
    ZNF23 70039.014 16q22
    ZNF689 30522.203 16p11.2

    GeneCards   GDB - List of genes

    This page should be referenced as such :
    Dessen P, Knuutila S, Huret JL Chromosome 16. Atlas Genet Cytogenet Oncol Haematol. 2002.
    URL : http://AtlasGeneticsOncology.org/Indexbychrom/idxa_16.html
    © Atlas of Genetics and Cytogenetics in Oncology and Haematology
    indexed on : Tue May 6 18:17:24 2008
    Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case reports   Journals   Portal   Teaching   

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