Atlas of Genetics and Cytogenetics in Oncology and Haematology

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Chromosome 16

Chromosome 16 : G-banding, diagram and R-banding - Claude Léonard, Jean-Loup Huret

Leukaemia     

t(1;16)(q11;q11)
t(1;16)(q12;q24)
t(3;16)(q21;q22) (AML; -- and CBFB?; rare)
t(3;16)(q27;p11)
t(3;16)(q27;p13)
t(4;16)(q26;p13)
t(5;16)(q33;q22) (AML; - ; rare)
t(8;16)(p11;p13)
t(8;16)(p11;p13) in treatment related leukemia
t(10;16)(q22;p13)
del(16)(q22)
inv(16)(p13q22)
t(16;16)(p13;q22)
inv(16)(p13q22) in treatment related leukemia
t(16;21)(p11;q22)
t(16;21)(q24;q22)

Solid Tumors     

t((7;16)(q33;p11)
t(12;13)(q14;q12)
t(11;16)(q13;p13)
t(12;16)(q13;p11)
t(12;16)(q13;p11)
t(12;16)(q13;p11)
t(12;15)(p13;q26)
t(16;17)(q22;p13)
t(16;21)(p11;q22)

Cancer prone diseases     

Rubinstein-Taybi syndrome (RTS)

All Genes by Location (Kb)
Chromosome 16 by location

Losses / Amplicons     

BONE/SOFT TISSUE

External links     

  • Chromosome 16 - HUGO Chromosomes
  • Chromosome 16 - GoldenPath - Santa Cruz
  • Chromosome 16 - Ensembl Project
  • Chromosome 16 - Map View - NCBI
  • Chromosome 16 - GDB (Genome Data Base)
  • Chromosome 16 - OMIM Gene map
  • Chromosome 16 - Genomic Variants
  • Chromosome 16 - HAPMAP Project
  • Chromosome 16 - Genome Channel - ORNL
  • Chromosome 16 - LaunchPad HGMIS
  • Chromosome 16 - Human Protein Atlas
  • Chromosome 16 - SpliceNest
  • Human BAC Resource (NCBI)
  • FISH-mapped BACs (CCAP)
  • Genetic Maps (CHLC)
  • YACs mapped by FISH (Bari)
  • PCP (Partial Chromosome Paints) (Bari)
  • Positional Cloning Project (Berlin Dahlem)
  • Mouse homology - OMIM - NCBI
  • Cancer GeneWeb
  • GeneCards (Weizmann)
  • Human Proteomics Initiative (Expasy)

    • Genes

    Annotated genes
    Ordered by Name Ordered by Location
     Kb pter-qter
    ABCC1 15950.935 16p13.1
    CBFA2T3 87468.768 16q24
    CBFB 65620.551 16q22.1
    CDH1 67328.696 16q22.1
    CIITA 10878.556 16p13
    CREBBP 3715.057 16p13.3
    EIF3C 28630.283 16p11.2
    ERCC4 13921.515 16p13.3|16p13.3-p13.11
    FANCA 88331.460 16q24.3
    FUS 31098.954 16p11.2
    MMP2 54072.975 16q13-q21
    MVP 29739.288 16p11.2
    MYH11 15704.493 16p13.11
    NQO1 68300.805 16q12-q22
    PLK1 23597.702 16p
    RBL2 52025.852 16q12.2
    TSC2 2037.991 16p13.3
    WFDC1 82885.902 16q24.3
    WWOX 76691.052 16q23.3-q24.1
    ZFHX3 71374.287 16q22.3
    Other genes
    possibly implicated
    in cancer
    Ordered by Name Ordered by Location
     Kb pter-qter
    ABCA3 2265.880 16p13.3
    ABCC11 46758.323 16q12
    ABCC6 16222.545 16p13.1
    ACD 66248.916 16q22
    ADAMTS18 75873.526 16q23
    ADCY7 48879.324 16q12.1
    ALDOA 29971.992 16p11.2
    AMFR 54952.865 16q21
    ANKRD11 87861.536 16q24.3
    APRT 87403.378 16q24
    AQP8 25135.786 16p12
    ARHGAP17 24838.213 16p12.2-p12.1
    ATMIN 79626.959 16q23.2
    ATP2A1 28797.310 16p12.1
    AXIN1 277.441 16p13.3
    BCAR1 73820.429 16q22-q23
    BCKDK 31027.163 16p11.2
    BCL7C 30806.617 16p11
    BFAR 14634.297 16p13.12
    BRD7 48910.442 16q12.1
    C16orf5 4500.678 16p13.3
    C16orf62 19474.541 16p12.3
    C1QTNF8 1078.227 16p13.3
    CACNA1H 1143.242 16p13.3
    CALB2 69950.127 16q22.2
    CCL17 55996.180 16q13
    CCL22 55950.219 16q13
    CCNF 2419.396 16p13.3
    CD19 28850.761 16p11.2
    CDH11 63538.184 16q21
    CDH13 81218.079 16q23.3
    CDH15 87765.664 16q24.3
    CDH16 65499.526 16q22.1
    CDH3 67235.652 16q22.1
    CDH5 64958.026 16q22.1
    CDH8 60244.736 16q22.1
    CDK10 88280.579 16q24.3
    CDR2 22264.758 16p13.1-p12
    CDT1 87397.687 16q24.3
    CES1 54394.265 16q22.2
    CES2 65525.848 16q22.1
    CFDP1 73885.109 16q22.2-q22.3
    CHP2 23673.449 16p12.1
    CHST4 70117.562 16q22.2
    CHTF18 778.623 16p13.3
    CIAPIN1 56019.588 16q13-q21
    CLUAP1 3490.964 16p13.3
    COTL1 83156.705 16q24.1
    COX4I1 84390.697 16q22-qter
    COX6A2 31346.556 16p11.12
    CPNE7 88169.677 16q24.3
    CSNK2A2 56749.313 16
    CTCF 66153.965 16q21-q22.3
    CTF1 30815.429 16p11.2
    CTF8 67709.414 16q22.1
    CX3CL1 55963.915 16q13
    CYBA 87237.198 16q24
    CYLD 49333.462 16q12-q13
    DDX19A 68938.325 16q22.1
    DDX19B 68890.573 16q22.3
    DDX28 66612.675 16q22.1-q22.3
    DHODH 70600.144 16q22
    DHX38 70685.116 16q22
    DNAJA2 45546.775 16q12.1
    DNAJA3 4415.883 16p13.3
    DPEP1 88207.217 16q24
    DYNLRB2 79132.355 16q23.3
    E2F4 65783.569 16q21-q22
    E4F1 2213.568 16p13.3
    EEF2K 22125.093 16p12
    EME2 1763.230 16p13.3
    ERN2 23609.127 16p12.2
    FA2H 73304.359 16q23
    FAM38A 87309.513 16q24.3
    FOXC2 85158.443 16q24.1
    FOXF1 85101.634 16q24
    FOXL1 85169.616 16q24
    FUK 69045.999 16q22.1
    GAS8 88616.509 16q24.3
    GFER 1974.151 16p13.3-p13.12
    GIYD2 29373.376 16p11.2
    GLG1 73043.357 16q22-q23
    GNAO1 54782.752 16q13
    GNG13 788.042 16p13.3
    GPR56 56211.459 16q12.2-q21
    GRIN2A 9762.923 16p13.2
    GSPT1 11869.486 16p13.1
    HAGH 1799.105 16p13.3
    HAS3 67698.944 16q22.1
    HMOX2 4466.342 16p13.3
    HP 70646.009 16q22.1
    HS3ST2 22733.361 16p12
    HSD11B2 66022.537 16q22
    HSD17B2 80626.364 16q24.1-q24.2
    HYDIN 69618.512 16q22.2
    IGFALS 1780.420 16p13.3
    IL17C 87232.502 16q24
    IL21R 27346.080 16p11
    IL27 28418.184 16p11
    IL32 3055.314 16p13.3
    IL4R 27232.752 16p12.1-p11.2
    IRF8 84490.275 16q24.1
    ITGAD 31312.134 16p13.1-p11
    ITGAL 30391.484 16p11.2
    ITGAM 31178.789 16p11.2
    ITGAX 31274.010 16p11.2
    LCAT 66531.288 16q22.1
    LITAF 11549.357 16p13.3-p12
    MAF 78185.732 16q22-q23
    MAPK3 30032.927 16p11.2
    MAPK8IP3 1696.222 16p13.3
    MAZ 29725.356 16p11.2
    MBTPS1 82644.870 16q24
    MC1R 88511.788 16q24.3
    MKL2 14072.697 16p13.3
    MLKL 73263.262 16q22.3
    MMP15 56616.783 16q13
    MMP25 3036.683 16p13.3
    MPG 68.169 16p13.3
    MRPL28 357.397 16p13.3
    MSLN 751.134 16p13.3
    MT1A 55230.079 16q13
    MT1F 55249.356 16q13
    MT1G 55258.154 16q13
    MT1H 55261.227 16q13
    MT2A 55200.012 16q13
    MT3 55180.768 16q13
    MYST1 31036.488 16p11.1
    Magmas 4330.253 16p13.3
    NDRG4 57055.495 16q21-q22.3
    NFAT5 68156.498 16q22.1
    NFATC3 66676.876 16q22
    NME3 1760.322 16q13.3
    NME4 387.193 16p13.3
    NOD2 49288.551 16q12
    NOL3 65765.371 16q22.1
    NSMCE1 27143.816 16p12.1
    NTHL1 2029.817 16p13.3
    NUP93 55321.608 16q13
    NUPR1 28456.163 16p11.2
    ORC6L 45281.059 16q12
    OSGIN1 82540.173 16q23.3
    PALB2 23521.984 16p12.1
    PDF 67920.025 16q22.1
    PDPK1 2527.971 16p13.3
    PHKG2 30667.238 16p11.2
    PIGQ 560.005 16p13.3
    PKD1 2078.712 16p13.3
    PKMYT1 2962.793 16p13.3
    PLA2G10 14673.906 16p13.1-p12
    PLCG2 80370.431 16q24.1
    PPL 4872.509 16p13.3
    PPP4C 29994.885 16p12-p11
    PRDM7 88650.475 16q24.3
    PRKCB1 23754.823 16p12
    PRM2 11276.994 16p13.13
    PRSS21 2807.165 16p13.3
    PRSS8 31050.255 16p11.2
    PSKH1 66484.676 16q22.1
    PSMB10 66525.908 16q22.1
    PSMD7 72888.182 16q22.3
    PYCARD 31120.308 16p11.2
    PYDC1 31134.784 16p11.2
    RAB26 2138.652 16p13.3
    RAB40C 580.180 16p13.3
    RBBP6 24458.409 16p12.2
    RGS11 258.311 16p13.3
    RNF166 87290.410 16q24.3
    RNF40 30681.131 16p11.2-p11.1
    RPL13 88154.591 16q24.3
    RPS2 1952.063 16p13.3
    RRAD 65513.083 16q22
    RRN3 15061.380 16p12
    SEPT1 30296.957 16p11.1
    SEPX1 1928.235 16p13.3
    SEZ6L2 29789.981 16p12.1
    SF3B3 69115.202 16q22.1
    SH2B1 28782.815 16p11.2
    SIAH1 46951.947 16q12
    SLC12A3 55456.620 16q13
    SLC12A4 66535.731 16q22.1
    SLC5A2 31401.940 16p12-p11
    SLC6A2 54248.057 16q12.2
    SLC7A5 86421.130 16q24.3
    SLC9A3R2 2016.889 16p13.3
    SMG1 18723.676 16p12.3
    SMPD3 66949.731 16q22.1
    SPG7 88102.306 16q24.3
    SPN 29581.801 16p11.2
    SRCAP 30617.963 16p11.2
    SSTR5 1068.870 16p13.3
    STUB1 670.116 16p13.3
    SULT1A1 28524.419 16p12.1
    SULT1A2 28510.767 16p12.1
    TAOK2 29892.723 16p11.2
    TAT 70158.255 16q22.1
    TCEB2 2761.416 16p12.3
    TCF25 88467.527 16q24.3
    TERF2 67947.034 16q22.1
    TERF2IP 74239.185 16q22.3
    TGFB1I1 31390.985 16p11
    TK2 65100.846 16
    TNFRSF12A 3010.314 16p13.3
    TNFRSF17 11966.465 16p13.1
    TP53TG3 33112.481 16p13
    TPSAB1 1230.679 16p13.3
    TRADD 65745.590 16q22
    TRAF7 2145.800 16p13.3
    TRAP1 3648.039 16p13.3
    TUBB3 88517.246 16q24.3
    UBE2I 1299.639 16p13.3
    USP7 8893.452 16p13.3
    VAC14 69278.843 16q22.1
    WWP2 68353.775 16q22.1
    ZNF23 70039.004 16q22
    ZNF689 30522.201 16p11.2

    GeneCards   GDB - List of genes

    This page should be referenced as such :
    Dessen P, Knuutila S, Huret JL Chromosome 16. Atlas Genet Cytogenet Oncol Haematol. 2002.
    URL : http://AtlasGeneticsOncology.org/Indexbychrom/idxa_16.html
    © Atlas of Genetics and Cytogenetics in Oncology and Haematology
    indexed on : Fri Sep 5 13:27:25 2008
    Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case reports   Journals   Portal   Teaching   

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