Atlas of Genetics and Cytogenetics in Oncology and Haematology

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Chromosome 16

Chromosome 16 : G-banding, diagram and R-banding - Claude Léonard, Jean-Loup Huret
Chromosome 16 diagrams ISCN 2009 - Courtesy Nicole Chia

Leukaemia     

t(1;16)(q11;q11)
t(1;16)(q12;q24)
t(3;16)(q21;q22)
t(3;16)(q27;p11)
t(3;16)(q27;p13)
t(4;16)(q26;p13)
t(5;16)(q33;q22)
t(8;16)(p11;p13) in treatment related leukemia
t(8;16)(p11;p13)
t(10;16)(q22;p13)
t(11;16)(q23;p13.3)
inv(16)(p13q22) in treatment related leukemia
del(16)(q22)
inv(16)(p13q22)
t(16;16)(p13;q22)
+16 or trisomy 16 (solely)
t(16;21)(q24;q22)
t(16;21)(p11;q22)

Solid Tumors     

t((7;16)(q33;p11)
t(12;13)(q14;q12)
t(11;16)(q13;p13)
t(12;16)(q13;p11)
t(12;16)(q13;p11)
t(12;16)(q13;p11)
t(12;15)(p13;q26)
t(16;17)(q22;p13)
t(16;21)(p11;q22)

Cancer prone diseases     

Hereditary diffuse gastric cancer (HDGC)
Rubinstein-Taybi syndrome (RTS)

All Genes by Location (Kb)
Chromosome 16 by location

Losses / Amplicons     

BONE/SOFT TISSUE

External links     

  • Chromosome 16 - HUGO Chromosomes
  • Chromosome 16 - GoldenPath - Santa Cruz
  • Chromosome 16 - Ensembl Project
  • Chromosome 16 - Map View - NCBI
  • Chromosome 16 - OMIM Gene map
  • Chromosome 16 - Genomic Variants
  • Chromosome 16 - HAPMAP Project
  • Chromosome 16 - Genome Channel - ORNL
  • Chromosome 16 - LaunchPad HGMIS
  • Chromosome 16 - Human Protein Atlas
  • Chromosome 16 - Array BAC clone - Roswell Park Cancer Institute
  • Chromosome 16 - Human BAC Resource (NCBI)
  • Chromosome 16 FISH-mapped BACs (CCAP)
  • Genetic Maps (CHLC)
  • YACs mapped by FISH (Bari)
  • PCP (Partial Chromosome Paints) (Bari)
  • Mouse homology - OMIM - NCBI
  • Chromosome 16 Cancer GeneWeb
  • Chromosome 16 GeneCards (Weizmann)
  • Human Proteomics Initiative (Expasy)

    • Genes

    Annotated genes
    Ordered by Name Ordered by Location
     Kb pter-qter
    ABCC1 16043.434 16p13.1
    CBFA2T3 88941.267 16q24
    CBFB 67063.050 16q22.1
    CDH1 68771.195 16q22.1
    CDT1 88870.186 16q24.3
    CIITA 10971.055 16p13
    CREBBP 3775.058 16p13.3
    CYLD 50775.961 16q12.1
    EIF3C 28722.782 16p11.2
    ERCC4 14014.014 16p13.12
    FANCA 89803.959 16q24.3
    FBXO31 87362.944 16q24.2
    FUS 31191.431 16p11.2
    IL21R 27438.579 16p11
    MAF 79627.746 16q22-q23
    MAPK3 30125.427 16p11.2
    MMP2 55515.474 16q13-q21
    MVP 29831.787 16p13.1-p11.2
    MYH11 15796.994 16p13.11
    NOL3 67207.870 16q21-q23
    NQO1 69743.305 16q22.1
    PHLPP2 71678.854 16q22.2
    PLK1 23690.201 16p12.2
    RBL2 53468.351 16q12.2
    SOCS1 11348.274 16p13.13
    TSC2 2097.990 16p13.3
    USP7 8985.951 16p13.3
    WFDC1 84328.401 16q24.3
    WWOX 78133.551 16q23.3-q24.1
    ZFHX3 72816.788 16q22.3-q23.1
    Other genes
    possibly implicated
    in cancer
    Ordered by Name Ordered by Location
     Kb pter-qter
    ABCA3 2325.879 16p13.3
    ABCC11 48200.822 16q12.1
    ABCC6 16315.045 16p13.1
    ACD 67691.416 16q22.1
    ACSM1 20634.559 16p12.3
    ADAMTS18 77316.026 16q23
    ADCY7 50321.823 16q12-q13
    ALDOA 30064.491 16p11.2
    AMFR 56395.365 16q21
    ANKRD11 89334.035 16q24.3
    APRT 88875.879 16q24
    AQP8 25228.285 16p12
    ARHGAP17 24930.714 16p12.1
    ATMIN 81069.458 16q23.2
    ATP2A1 28889.809 16p12.1
    ATP6V0C 2563.953 16p13.3
    AXIN1 337.440 16p13.3
    BANP 87985.038 16q24.2-q24.3
    BCAR1 75262.929 16q23.1
    BCKDK 31119.662 16p11.2
    BCL7C 30899.117 16p11
    BFAR 14726.668 16p13.12
    BRD7 50352.929 16q12
    BTBD12 3631.184 16p13.3
    C16orf5 4560.679 16p13.3
    C16orf62 19567.040 16p12.3
    C1QTNF8 1138.226 16p13.3
    CACNA1H 1203.241 16p13.3
    CALB2 71392.626 16q22.2
    CCL17 57438.679 16q13
    CCL22 57392.718 16q13
    CCNF 2479.395 16p13.3
    CD19 28943.260 16p11.2
    CDH11 64980.685 16q22.1
    CDH13 82660.578 16q24.2-q24.3
    CDH15 89238.163 16q24.3
    CDH16 66942.026 16q22.1
    CDH3 68678.151 16q22.1
    CDH5 66400.525 16q22.1
    CDH8 61687.235 16q22.1
    CDK10 89753.076 16q24
    CDR2 22357.259 16p12.3
    CES1 55836.766 16q13-q22.1
    CES2 66968.347 16q22.1
    CFDP1 75327.609 16q22.2-q22.3
    CHMP1A 89710.846 16q24.3
    CHP2 23765.948 16p12.2
    CHST4 71560.154 16q22.2
    CHTF18 838.622 16p13.3
    CHTF8 69151.912 16q22.1
    CIAPIN1 57462.087 16q13-q21
    CLDN6 3064.714 16p13.3
    CLEC3A 78056.443 16q23
    CLUAP1 3550.963 16p13.3
    CMIP 81528.954 16q23
    COTL1 84599.206 16q24.1
    COX4I1 85833.196 16q22-qter
    COX6A2 31439.055 16p
    CPNE7 89642.176 16q24.3
    CRYM 21269.839 16p13.11-p12.3
    CSNK2A2 58191.816 16q21
    CTCF 67596.464 16q21-q22.3
    CTF1 30907.928 16p11.2-p11.1
    CX3CL1 57406.414 16q13
    CYB5B 69458.490 16q22.1
    CYBA 88709.698 16q24
    DDX19A 70380.824 16q22.1
    DDX19B 70333.072 16q22.1
    DDX28 68055.179 16q22.1
    DHODH 72042.643 16q22
    DHX38 72127.615 16q21-q22.3
    DNAJA2 46989.274 16q12.1
    DNAJA3 4475.858 16p13.3
    DOK4 57505.872 16q21
    DPEP1 89679.716 16q24.3
    DYNLRB2 80574.854 16q23.3
    E2F4 67226.068 16q21-q22
    E4F1 2273.567 16p13.3
    EEF2K 22217.592 16p12.2
    EME2 1823.229 16p13.3
    EMP2 10622.280 16p13.2
    ERN2 23701.628 16p12.2
    FA2H 74746.858 16q23
    FAM38A 88781.747 16q24.3
    FOXC2 86600.857 16q22-q24
    FOXF1 86544.133 16q24
    FOXL1 86612.115 16q24
    FTO 53737.875 16q12.2
    FUK 70488.498 16q22.1
    GAS8 90089.008 16q24.3
    GFER 2034.150 16p13.3-p13.12
    GINS3 58426.298 16q21
    GIYD1 29465.875 16p11.2
    GIYD2 29465.875 16p11.2
    GLG1 74481.328 16q22.3
    GNAO1 56225.251 16q13
    GNG13 848.044 16p13.3
    GNPTG 1401.900 16p13.3
    GPR56 57653.910 16q12.2-q21
    GRIN2A 9847.267 16p13.2
    GSPT1 11961.987 16p13.1
    HAGH 1859.106 16p13.3
    HAS3 69141.443 16q22.1
    HBA1 226.679 16p13.3
    HMOX2 4526.341 16p13.3
    HP 72088.508 16q22.1
    HS3ST2 22825.860 16p12
    HSD11B2 67465.036 16q22
    HSD17B2 82068.858 16q24.1-q24.2
    HYDIN 71061.013 16q22.2
    IGFALS 1840.416 16p13.3
    IL17C 88705.001 16q24
    IL27 28510.684 -
    IL32 3115.313 16p13.3
    IL4R 27325.251 16p12.1-p11.2
    IRF8 85932.774 16q24.1
    IRX5 54965.111 16q11.2-q13
    ITGAD 31404.633 16p11.2
    ITGAL 30483.983 16p11.2
    ITGAM 31271.288 16p11.2
    ITGAX 31366.509 16p11.2
    JMJD5 27215.296 16p12.1
    KIAA0174 71929.446 16q22.2
    KIF22 29802.058 16p11.2
    KIFC3 57792.131 16q13-q21
    LCAT 67973.787 16q22.1
    LITAF 11641.582 16p13.13
    MAP1LC3B 87425.801 16q24.2
    MAPK8IP3 1756.221 16p13.3
    MAZ 29817.855 16p11.2
    MBTPS1 84087.371 16|16q24
    MC1R 89984.287 16q24.3
    MKL2 14165.196 16p13.12
    MLKL 74705.753 16q23.1
    MMP15 58059.282 16q13-q21
    MMP25 3096.682 16p13.3
    MPG 128.169 16p13.3
    MRPL28 417.396 16p13.3
    MSLN 810.766 16p13.3
    MT1A 56672.578 16q13
    MT1E 56659.585 16q13
    MT1F 56691.855 16q13
    MT1G 56700.653 16q13
    MT1H 56703.726 16q13
    MT2A 56642.478 16q13
    MT3 56623.267 16q13
    MTSS1L 70695.108 16q22.1
    MYST1 31128.985 16p11.2
    NAE1 66836.782 16q22
    NDE1 15758.631 16p13.11
    NDRG4 58497.994 16q21-q22.1
    NFAT5 69598.997 16q22.1
    NFATC3 68119.375 16q22.2
    NKD1 50582.241 16q12
    NME3 1820.322 16q13
    NME4 447.192 16p13.3
    NOD2 50731.050 16q21
    NSMCE1 27236.315 16p12.1
    NTHL1 2089.816 16p13.3
    NUP93 56764.017 16q13
    NUPR1 28548.662 16p11.2
    ORC6L 46723.558 16q12
    OSGIN1 83982.672 16q23.3
    PALB2 23614.483 16p12.2
    PARD6A 67694.851 16q22.1
    PDF 69362.524 16q22.1
    PDIA2 333.163 16p13.3
    PDPK1 2587.970 16p13.3
    PGP 2261.603 16p13.3
    PHKG2 30759.620 16p12.1-p11.2
    PIGQ 620.004 16p13.3
    PKD1 2138.711 16p13.3
    PKMYT1 3022.794 16p13.3
    PLA2G10 14766.407 16p13.1-p12
    PLCG2 81812.930 16q24.1
    PPL 4932.508 16p13.3
    PPP4C 30087.384 16p12-p11
    PRDM7 90122.976 16q24.3
    PRKCB 23847.300 16p11.2
    PRM2 11369.493 16p13.2
    PRSS21 2867.164 16p13.3
    PRSS41 2848.486 16p13.3
    PRSS8 31142.756 16p11.2
    PSKH1 67927.175 16q22.1
    PSMB10 67968.407 16q22.1
    PSMD7 74330.681 16q23-q24
    PYCARD 31212.809 16p12-p11.2
    PYDC1 31227.284 16p11.2
    RAB11FIP3 524.850 16p13.3
    RAB26 2198.651 16p13.3
    RAB40C 639.357 16p13.3
    RBBP6 24550.908 16p12.2
    RFWD3 74656.809 16q23.1
    RGS11 318.310 16p13.3
    RHBDF1 108.059 16p13.3
    RNF166 88762.904 16q24.3
    RNF40 30773.630 16p11.2-p11.1
    RPL13 89627.090 16q24.3|17p11.2
    RPS2 2012.062 16p13.3
    RRAD 66955.582 16q22
    RRN3 15153.881 16p12
    SCNN1B 23313.591 16p12.2-p12.1
    SEPT1 30389.457 16p11.1
    SEPX1 1988.235 16p13.3
    SEZ6L2 29882.482 16p11.2
    SF3B3 70557.691 16q22.1
    SH2B1 28875.078 16p11.2
    SIAH1 48394.446 16q12
    SLC12A3 56899.119 16q13
    SLC12A4 67977.377 16q22.1
    SLC5A2 31494.439 16p12-p11
    SLC6A2 55690.352 16q12.2
    SLC7A5 87863.630 16q24.3
    SLC9A3R2 2076.888 16p13.3
    SMG1 18816.176 16p12.3
    SMPD3 68392.232 16q22.1
    SOX8 1031.808 16p13.3
    SPG7 89574.805 16q24.3
    SPN 29674.300 16p11.2
    SRCAP 30710.462 16p11.2
    SSTR5 1128.781 16p13.3
    ST3GAL2 70413.338 16q22.1
    STUB1 730.115 16p13.3
    SULT1A1 28616.918 16p12.1
    SULT1A2 28603.266 16p12.1
    TAOK2 29985.222 16p11.2
    TAT 71600.754 16q22.1
    TCEB2 2821.416 16p12.3
    TCF25 89939.994 16q24.3
    TERF2 69389.535 16q22.1
    TERF2IP 75681.684 16q23.1
    TFAP4 4307.188 16p13
    TGFB1I1 31483.476 16p11.2
    TIMM16 4390.253 16p13.3
    TK2 66541.907 16q22-q23.1
    TNFRSF12A 3070.313 16p13.3
    TNFRSF17 12058.964 16p13.1
    TNRC6A 24741.049 16p11.2
    TOX3 52471.918 16q12.1
    TP53TG3 33204.980 16p13
    TPPP3 67423.714 16q22.1
    TPSAB1 1290.678 16p13.3
    TPSG1 1271.651 16p13.3
    TRADD 67188.089 16q22
    TRAF7 2205.799 16p13.3
    TRAP1 3708.039 16p13.3
    TRIM72 31225.342 16p11.2
    TUBB3 89989.745 16q24.3
    UBE2I 1359.638 16p13.3
    USP10 84733.555 16q24.1
    VAC14 70721.344 16q22.1-q22.2
    VKORC1 31102.176 16p11.2
    WWP2 69796.274 16q22.1
    YPEL3 30103.637 16p11.2
    ZG16 29789.561 16p11.2
    ZG16B 2880.173 16p13.3
    ZNF23 71481.513 16q22
    ZNF689 30614.701 16p11.2

    GeneCards  

    Contributor(s)

    WrittenJul 2004Philippe Dessen, Sakari Knuutila, Jean-Loup Huret
    UpdatedJul 2010Jean-Loup Huret, Philippe Dessen

    Citation

    This paper should be referenced as such :
    Dessen P, Knuutila S, Huret JL . Chromosome . Atlas Genet Cytogenet Oncol Haematol. Jul 2004 .
    URL : http://AtlasGeneticsOncology.org/Indexbychrom/idxa_16.html
    Dessen P, Huret JL . Chromosome . Atlas Genet Cytogenet Oncol Haematol. Jul 2010 .
    URL : http://AtlasGeneticsOncology.org/Indexbychrom/idxa_16.html
    © Atlas of Genetics and Cytogenetics in Oncology and Haematology
    indexed on : Fri Jul 16 13:33:21 CEST 2010
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