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Atlas of Genetics and Cytogenetics in Oncology and Haematology

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Chromosome 7

Chromosome 7 : G-banding, diagram and R-banding - Claude Léonard, Jean-Loup Huret
Chromosome 7 diagrams ISCN 2009 - Courtesy Nicole Chia

Leukaemia     

t(1;7)(q10;p10)
t(1;7)(p36;q34)
t(1;7)(p34;q34)
t(1;7)(q21;q22)
t(1;7)(p32;q34)
t(2;7)(p11;q21)
t(3;7)(q26;q21)
t(3;7)(q27;p12-13)
t(3;7)(q27;q32)
t(5;7)(q33;q11)
t(6;7)(q23;q34)
-7/del(7q) in childhood
-7/del(7q) in adults
del(7q) in non-Hodgkin's lymphoma (NHL)
inv(7)(p15q34)
t(7;8)(q34;p11)
dic(7;9)(p11-13;p11)
t(7;9)(q11;p13)
t(7;9)(q34;q32)
t(7;9)(q34;q34)
t(7;10)(q34;q24)
t(7;11)(p15;p15)
t(7;11)(q35;p13)
t(7;12)(q36;p13)
t(7;12)(p12;q13)
t(7;12)(q34;p13)
t(7;14)(q35;q32.1) TRB@/TCL1A
t(7;14)(p15;q11)
t(7;14)(p15;q32) (AML, T-ALL; - ; rare)
t(7;14)(q21;q13)
t(7;14)(q21;q32) ERVWE1/IgH
t(7;14)(q21;q32) CDK6/IgH
t(7;14)(q22;q11)
t(7;17)(p15;q23)
t(7;17)(q32-34;q23)
t(7;19)(q34;p13)
t(7;21)(p15;q22)
t(7;21)(p22;q22)
t(7;22)(q21;q11)

Solid Tumors     

del(7)(q22;q32)
inv(7)(q21q34)
t(7;8)(q31;q13)
t(7;8)(p22;q12)
t(7;12)(q22;q13-14)
t(7;12)(p22;q13)
t((7;16)(q33;p11)
t(7;17)(p15;q21)
t(7;22)(p22;q12)
t(7;22)(p22;q12)

Cancer prone diseases     

Currarino syndrome
Pallister Hall syndrome (PHS)
Hereditary papillary renal cell carcinoma
Shwachman-Diamond syndrome (SDS)
Stiff-person syndrome

All Genes by Location (Kb)
Chromosome 7 by location

Losses / Amplicons     

BONE/SOFT TISSUE

External links     

  • Chromosome 7 - HUGO Chromosomes
  • Chromosome 7 - GoldenPath - Santa Cruz
  • Chromosome 7 - Ensembl Project
  • Chromosome 7 - Map View - NCBI
  • Chromosome 7 - OMIM Gene map
  • Chromosome 7 - Genomic Variants
  • Chromosome 7 - HAPMAP Project
  • Chromosome 7 - Genome Channel - ORNL
  • Chromosome 7 - LaunchPad HGMIS
  • Chromosome 7 - Human Protein Atlas
  • Chromosome 7 - Array BAC clone - Roswell Park Cancer Institute
  • Chromosome 7 - Human BAC Resource (NCBI)
  • Chromosome 7 FISH-mapped BACs (CCAP)
  • Genetic Maps (CHLC)
  • YACs mapped by FISH (Bari)
  • PCP (Partial Chromosome Paints) (Bari)
  • Mouse homology - OMIM - NCBI
  • Chromosome 7 Cancer GeneWeb
  • Chromosome 7 GeneCards (Weizmann)
  • IMGT, the international ImMunoGeneTics database (Montpellier,France)
  • Human Proteomics Initiative (Expasy)

    • Genes

    Annotated genes
    Ordered by Name Ordered by Location
     Kb pter-qter
    ABCB1 86970.884 7q21.12
    ABCB5 20653.741 7p21.1
    ACTB 5533.305 7p15-p12
    AKAP9 91408.125 7q21-q22
    ANLN 36395.957 7p15-p14
    ASNS 97319.377 7q21.3
    BCL7B 72588.622 7q11.23
    BRAF 140080.282 7q34
    CAV1 115952.075 7q31.1
    CLDN4 72883.129 7q11.23
    COL1A2 93861.809 7q22.1
    CREB3L2 137210.265 7q34
    CYP2W1 989.361 7p22.3
    DMTF1 86619.613 7q21
    EPHA1 142798.328 7q34
    FSCN1 5598.980 7p22
    GPER 1092.969 7p22.3
    GPNMB 23252.841 7p15
    GRB10 50625.254 7p12-p11.2
    HBP1 106596.696 7q22-q31
    HIP1 75001.345 7q11.23
    HOXA11 27187.301 7p15-p14
    HOXA9 27168.582 7p15-p14
    HSPB1 75769.811 7q11.23
    IKZF1 50314.924 7p13-p11.1
    IL6 22733.291 7p21
    JAZF1 27836.718 7p15.2-p15.1
    LIMK1 73136.092 7q11.23
    MET 116099.695 7q31
    MNX1 156490.308 7q36
    MUC17 100450.084 7q22.1
    NPY 24290.334 7p15.1
    NRCAM 107575.318 7q31.1-q31.2
    NRF1 129057.155 7q32
    POU6F2 39012.933 7p14-p13
    SFRP4 37912.060 7p14.1
    SHH 155288.319 7q36
    STEAP1 89621.625 7q21
    TAC1 97199.207 7q21-q22
    TRG@ 38268.315 7p14
    TRIM24 137795.619 7q32-q34
    TRPV6 142279.082 7q33-q34
    TWIST1 19121.616 7p21.2
    Other genes
    possibly implicated
    in cancer
    Ordered by Name Ordered by Location
     Kb pter-qter
    ABCB4 86869.297 7q21.1
    ABCB8 150356.443 7q36
    ABCF2 150535.856 7q36
    ACHE 100325.551 7q22
    ACTR3B 152087.784 7q36.1
    ADAM22 87401.638 7q21
    ADAP1 904.063 7p22.3
    ADCK2 140019.422 7q32-q34
    ADCYAP1R1 31058.667 7p14
    AGK 140897.547 7q34
    AGR2 16798.791 7p21.3
    AGR3 16865.555 7p21.1
    AHCYL2 128652.100 7q32.1
    AHR 17304.832 7p15
    AKR1B10 133862.884 7q33
    AKR1B1 133777.647 7q35
    ALKBH4 101883.695 7q22.1
    AMPH 38389.830 7p14-p13
    AP1S1 100584.406 7q22.1
    AQP1 30917.993 7p14
    ARAF2P 62440.505 7q11.21
    ARF5 127015.753 7q31.3
    ARHGEF5 143683.422 7q33-q35
    ARMC10 102502.564 7q22.1
    ARPC1A 98761.446 7q22.1
    ARPC1B 98810.265 7q22.1
    ATP6V0A4 138041.579 7q33-q34
    ATP6V1F 128290.134 7q32
    AZGP1 99402.286 7q22.1
    BBS9 33135.677 7p14
    BLACE 154842.443 7q36
    BPGM 133982.071 7q31-q34
    BRI3 97748.923 7q21.3
    BUD31 98844.537 7q22.1
    C7orf11 40138.867 7p14.1
    C7orf54 127424.798 7q31
    C7orf63 89712.461 7q21.13
    CALCR 92891.735 7q21.3
    CALD1 134114.711 7q33
    CAMK2B 44223.274 22q12|7p14.3-p14.1
    CARD11 2912.295 7p22
    CASP2 142695.524 7q34-q35
    CATR1 129333.455 7q32
    CAV2 115926.680 7q31.1
    CBLL1 107171.515 7q22.3-q31.1
    CBX3 26207.624 7p15.2
    CCDC136 128219.335 7q33
    CCL24 75279.050 7q11.23
    CCM2 45033.510 7p13
    CCT6A 56086.872 7p11.2
    CD36 80105.768 7q11.2
    CDK5 150381.832 7q36
    CDK6 92072.173 7q21-q22
    CFTR 116907.253 7q31.2
    CHN2 29486.011 7p15.3
    CHST12 2409.785 7p22
    CLDN12 89870.732 7q21
    CLDN3 72821.263 7q11.23
    CNTNAP2 145444.386 7q35-q36
    COPG2 129933.316 7q32
    COPS6 99524.519 7q22.1
    CPA4 129720.210 7q32
    CRHR2 30659.388 7p14.3
    CUL1 148026.866 7q36.1
    CUX1 101246.012 7q22.1
    CYCS 25124.800 7p15.3
    CYP3A43 99263.572 7q21.1
    CYP3A4 99192.540 7q21.1
    CYP3A5 99083.753 7q21.1
    CYTH3 6167.937 7p22.1
    DBF4 87343.480 7q21.3
    DDC 50493.628 7p12.2
    DDX56 44571.928 7p13
    DFNA5 24704.499 7p15
    DLD 107318.822 7q31-q32
    DLX5 96487.638 7q22
    DNAJB6 156822.471 7q36.3
    DNAJB9 107997.592 7q31|14q24.2-q24.3
    DNAJC2 102740.157 7q22
    EEPD1 36159.361 7p14.2
    EGFR 55054.219 7p12
    EIF3B 2361.000 7p22.3
    ELN 73080.363 DKFZp434L134, NY-REN-21, Zipro1
    EN2 154943.585 7q36
    EPDR1 37926.688 7p14.1
    EPHB4 100238.123 7q22
    EPHB6 142262.914 7q33-q35
    EPO 100156.359 7q22
    ETV1 13897.381 7p21.3
    EXOC4 132588.363 7q31
    EZH2 148135.408 7q35-q36
    FAM3C 120776.141 7q31
    FASTK 150404.641 7q35
    FEZF1 121729.287 7q31.32
    FGL2 76660.624 7q11.23
    FLNC 128257.719 7q32-q35
    FOXP2 113842.288 7q31
    FTSJ2 2240.452 7p22
    FZD1 90731.719 7q21
    FZD9 72486.045 7q11.23
    GBAS 55999.790 7p12
    GCK 44150.395 7p15.3-p15.1
    GGCT 30502.762 7p15-p14
    GHRHR 30970.161 7p14
    GIMAP4 149895.391 7q36.1
    GLI3 41967.075 7p13
    GNA12 2734.267 7p22.2
    GNAI1 79602.076 7q21
    GNB2 100109.299 7q21.3-q22.1|7q22
    GNG11 93388.952 7q21
    GNGT1 93373.756 7q21.3
    GUSB 65063.108 7q21.11
    HDAC9 18501.894 7p21.1
    HECW1 43118.723 7p14.1-p13
    HGF 81169.380 7q21.1
    HIPK2 138896.856 7q32-q34
    HNRNPA2B1 26196.081 7p15
    HOXA10 27176.735 7p15-p14
    HOXA13 27203.024 7p15-p14
    HOXA1 27099.139 7p15.3
    HOXA4 27134.651 7p15-p14
    HOXA5 27147.521 7p15-p14
    HOXA7 27159.863 7p15-p14
    HUS1 47970.308 7p13-p12
    IGF2BP3 23316.353 7p11
    IGFBP1 45894.484 7p13-p12
    IGFBP3 45918.369 7p13-p12
    IMPDH1 127819.567 7q31.3-q32
    ING3 120378.053 7q31
    INHBA 41695.126 7p15-p13
    INSIG1 154720.476 7q36
    IRF5 128368.008 7q32
    ITGB8 20337.250 7p21.1
    KCNH2 150272.982 7q35-q36
    KIAA0415 4781.790 7p22.2
    KLHL7 23111.878 7p15.3
    KPNA7 98609.133 7q22.1
    KRIT1 91666.219 7q21-q22
    LAMB1 107351.482 7q22
    LAT2 73262.023 7q11.23
    LEP 127668.567 7q31.3
    LMTK2 97574.133 7q21.3
    LRRC17 102340.702 7q22.1
    LRRC4 127454.360 7q31.3
    LUZP6 135262.043 7q33
    MACC1 20140.804 7p21.1
    MAD1L1 1821.954 7p22
    MAFK 1536.894 7p22.3
    MAGI2 77484.310 7q21
    MCM7 99528.340 7q21.3-q22.1
    MEOX2 15617.362 7p22.1-p21.3
    MEST 129919.174 7q32
    MKLN1 130445.395 7q32
    MKRN1 139802.453 7q34
    MLL3 151462.943 7q36.1
    MLL5 104441.873 7q22.1
    MLXIPL 72645.460 7q11.23
    MOGAT3 100625.733 7q22.1
    MPP6 24579.610 7p15
    MUC3A 100389.182 7q22
    MYH16 98708.859 7q22.1
    NAMPT 105675.968 7q22.3
    NCAPG2 158116.764 7q36.3
    NCF1 73826.245 7q11.23
    NCF1C 74216.115 7q11.23
    NOD1 30430.668 7p15-p14
    NOS3 150319.080 7q36
    NPTX2 98084.533 7q21.3-q22.1
    NT5C3 33020.267 7p14.3
    NUB1 150669.791 7q36
    NUDT1 2248.383 7p22
    NUP205 134893.202 7q33
    NUPL2 23187.971 7p15
    ORC5L 103554.024 7q22.1
    PAX4 127037.582 7q32
    PDGFA 503.425 7p22
    PDK4 95050.745 7q21.3
    PEG10 94123.573 7q21
    PGAM2 44068.851 7p13-p12
    PHF14 10980.041 7p21.3
    PHKG1 56116.169 7p11.2
    PIK3CG 106293.160 7q22.3
    PIP 142539.296 7q34
    PLEKHA8 30034.813 7p21-p11.2
    PMPCB 102725.109 7q22.1
    PMS2 5979.396 7p22.2
    PMS2CL 6741.460 7p22.1
    PMS2L11 76448.354 7q11.23
    PMS2L1 99756.472 7q22.1
    PMS2L2 74780.552 7q11-q22
    PMS2L3 74975.005 7q11.23
    PMS2L4 66394.858 7q11-q22
    PMS2L5 73944.837 7q11-q22
    PNPLA8 107899.307 7q31
    PODXL 130835.561 7q32-q33
    POLD2 44120.811 7p13
    POLM 44078.372 7p13
    PON1 94765.607 7q21.3
    POR 75382.356 7q11.2
    POT1 124249.676 7q31.33
    PPIA 44802.766 7p13
    PPP1R3A 113304.118 7q31.1
    PPP1R9A 94374.885 7q21.3
    PRKAG2 150884.134 7q36.1
    PRKAR1B 555.913 7p22
    PRKAR2B 106472.414 7q22
    PRSS1 142136.893 7q32-qter|7q34
    PRSS2 142178.778 7q34
    PTN 136562.635 7q33-q34
    PTPN12 77005.288 7q11.23
    PTPRN2 157024.511 7q36
    PTPRZ1 121300.395 7q31.3
    PURB 44882.417 7p13
    RAB19 139753.916 7q34
    RABGEF1 65843.078 7q11.21
    RABL5 100743.369 7q22.1
    RAC1 6380.651 7p22
    RALA 39629.687 7p15-p13
    RAPGEF5 22124.433 7p15.3
    RBAK 5052.079 7p22.1
    RELN 102899.469 7q22
    RFC2 73283.768 7q11.23
    RHBDD2 75346.253 7q11.23
    RHEB 150794.031 7q36
    RINT1 104959.768 7q22.3
    RNF133 122125.002 7q31.32
    RNF148 122128.956 7q31.33
    RNF32 156126.162 7q36
    RPA3 7643.100 7p22
    SBDS 66090.125 7q11.21
    SEC61G 54787.434 7p11.2
    SEMA3A 83425.595 7p12.1
    SEMA3C 80209.790 7q21-q31
    SEMA3D 84462.808 7q21.11
    SEMA3E 82831.158 7q21.11
    SEPT7 35807.152 7p14.3-p14.1
    SERPINE1 100557.099 7q21.3-q22
    SH2B2 101715.166 7q22
    SHFM1 96156.015 7q21.3-q22.1
    SKAP2 26673.213 7p21-p15
    SLC26A3 107193.148 7q31
    SLC26A4 107088.316 7q31
    SLC29A4 5289.087 7p22.1
    SLC4A2 150387.590 7q35-q36
    SMARCD3 150566.992 7q35-q36
    SMO 128615.949 7q32.3
    SMURF1 98463.000 7q22.1
    SND1 127079.438 7q31.3
    SOSTDC1 16467.631 7p21.1
    SP4 21434.214 7p15.3
    SPAM1 123352.565 7q31.3
    SRI 87672.368 7q21.1
    SRPK2 104544.059 7q22-q31.1
    SSBP1 141084.645 7q34
    ST7 116380.617 7q31.1-q31.3
    STAG3 99613.474 7q22.1
    STEAP2 89679.110 7q21
    STEAP4 87743.680 7q21.12
    STK17A 43589.217 7p12-p14
    STK31 23716.363 7p15.3
    STX1A 72751.476 7q11.23
    TAS2R38 141318.900 7q34
    TAX1BP1 27746.263 7p15
    TBRG4 45106.224 7p14-p13
    TBXAS1 139175.492 7q34-q35
    TES 115637.817 7q31.2
    TFEC 115362.438 7q31.2
    TFPI2 93353.681 7q22
    TFR2 100055.975 7q22
    TMEM120A 75454.092 7q11.23
    TMEM176A 150128.787 7q36.1
    TNPO3 128382.184 7q32.1
    TNS3 47281.277 7p12.3
    TP53TG1 86792.476 7q21.1
    TRGV9 38265.767 7p14
    TRIP6 100302.886 7q22
    TRPV5 142315.770 7q35
    TRRAP 98314.049 7q21.2-q22.1
    TSL 27623.557 -
    TSPAN13 16759.876 7p21.1
    UBE2D4 43932.572 7p13
    UBE2H 129260.231 7q32
    UBE3C 156624.416 7q36.3
    UPK3B 75977.681 7q11.2
    UPP1 48095.271 7p12.3
    URGCP 43882.026 7p13
    USP42 6111.076 7p22.1
    VGF 100592.510 7q22.1
    VOPP1 55505.800 7p11.2
    WASL 123109.233 7q31.3
    WNT16 120752.657 7q31
    WNT2 116703.924 7q31.2
    XRCC2 151974.520 7q36.1
    YKT6 44207.103 7p15.1
    YWHAG 75794.044 7q11.23
    ZC3HC1 129445.362 7q32.2
    ZYX 142788.482 7q32

    GeneCards  

    Contributor(s)

    WrittenJul 2004Philippe Dessen, Sakari Knuutila, Jean-Loup Huret
    Updated Jean-Loup Huret, Philippe Dessen

    Citation

    This paper should be referenced as such :
    Dessen P, Knuutila S, Huret JL . Chromosome . Atlas Genet Cytogenet Oncol Haematol. Jul 2004 .
    URL : http://AtlasGeneticsOncology.org/Indexbychrom/idxa_.html
    Dessen P, Huret JL . Chromosome . Atlas Genet Cytogenet Oncol Haematol. .
    URL : http://AtlasGeneticsOncology.org/Indexbychrom/idxa_.html
    © Atlas of Genetics and Cytogenetics in Oncology and Haematology
    indexed on : Sat Feb 6 14:40:45 CET 2010
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