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Chromosome 7

Chromosome 7 : G-banding, diagram and R-banding - Claude Léonard, Jean-Loup Huret
Chromosome 7 diagrams ISCN 2009 - Courtesy Nicole Chia

Leukaemia     

t(1;7)(q10;p10)
t(1;7)(p36;q34)
t(1;7)(p34;q34)
t(1;7)(q21;q22)
t(1;7)(p32;q34)
t(2;7)(p11;q21)
t(3;7)(q26;q21)
t(3;7)(q27;p12-13)
t(3;7)(q27;q32)
t(5;7)(q33;q11)
t(6;7)(q23;q34)
-7/del(7q) in childhood
-7/del(7q) in adults
del(7q) in non-Hodgkin's lymphoma (NHL)
inv(7)(p15q34)
t(7;8)(q34;p11)
dic(7;9)(p11-13;p11)
t(7;9)(q11;p13)
t(7;9)(q34;q32)
t(7;9)(q34;q34)
t(7;10)(q34;q24)
t(7;11)(p15;p15)
t(7;11)(q35;p13)
t(7;12)(q36;p13)
t(7;12)(p12;q13)
t(7;12)(q34;p13)
t(7;14)(q35;q32.1) TRB@/TCL1A
t(7;14)(p15;q11)
t(7;14)(p15;q32) (AML, T-ALL; - ; rare)
t(7;14)(q21;q13)
t(7;14)(q21;q32) ERVWE1/IgH
t(7;14)(q21;q32) CDK6/IgH
t(7;14)(q22;q11)
t(7;17)(p15;q23)
t(7;17)(q32-34;q23)
t(7;19)(q34;p13)
t(7;21)(p15;q22)
t(7;21)(p22;q22)
t(7;22)(q21;q11)

Solid Tumors     

del(7)(q22;q32)
inv(7)(q21q34)
t(7;8)(q31;q13)
t(7;8)(p22;q12)
t(7;12)(q22;q13-14)
t(7;12)(p22;q13)
t((7;16)(q33;p11)
t(7;17)(p15;q21)
t(7;22)(p22;q12)
t(7;22)(p22;q12)

Cancer prone diseases     

Currarino syndrome
Pallister Hall syndrome (PHS)
Hereditary papillary renal cell carcinoma
Shwachman-Diamond syndrome (SDS)
Stiff-person syndrome

All Genes by Location (Kb)
Chromosome 7 by location

Losses / Amplicons     

BONE/SOFT TISSUE

External links     

  • Chromosome 7 - HUGO Chromosomes
  • Chromosome 7 - GoldenPath - Santa Cruz
  • Chromosome 7 - Ensembl Project
  • Chromosome 7 - Map View - NCBI
  • Chromosome 7 - OMIM Gene map
  • Chromosome 7 - Genomic Variants
  • Chromosome 7 - HAPMAP Project
  • Chromosome 7 - Genome Channel - ORNL
  • Chromosome 7 - LaunchPad HGMIS
  • Chromosome 7 - Human Protein Atlas
  • Chromosome 7 - Array BAC clone - Roswell Park Cancer Institute
  • Chromosome 7 - Human BAC Resource (NCBI)
  • Chromosome 7 FISH-mapped BACs (CCAP)
  • Genetic Maps (CHLC)
  • YACs mapped by FISH (Bari)
  • PCP (Partial Chromosome Paints) (Bari)
  • Mouse homology - OMIM - NCBI
  • Chromosome 7 Cancer GeneWeb
  • Chromosome 7 GeneCards (Weizmann)
  • IMGT, the international ImMunoGeneTics database (Montpellier,France)
  • Human Proteomics Initiative (Expasy)

    • Genes

    Annotated genes
    Ordered by Name Ordered by Location
     Kb pter-qter
    ABCB1 87132.948 7q21.12
    ABCB5 20655.245 7p21.1
    ACTB 5566.783 7p15-p12
    AKAP9 91570.189 7q21-q22
    ANLN 36429.432 7p15-p14
    ASNS 97481.443 7q21.3
    BCL7B 72950.686 7q11.23
    BRAF 140433.815 7q34
    CAV1 116165.063 7q31.1
    CLDN4 73245.193 7q11.23
    COL1A2 94023.873 7q22.1
    CREB3L2 137559.727 7q34
    CYP2W1 1022.835 7p22.3
    DMTF1 86781.677 7q21
    EPHA1 143088.207 7q34
    ERVWE1 92071.391 7q21-q22
    FSCN1 5632.454 7p22
    GPER 1126.443 7p22.3
    GPNMB 23286.316 7p15
    GRB10 50657.760 7p12-p11.2
    HBP1 106809.460 7q22-q31
    HIP1 75163.409 7q11.23
    HIPK2 139246.317 7q32-q34
    HOXA11 27220.777 7p15-p14
    HOXA9 27202.058 7p15-p14
    HSPB1 75931.875 7q11.23
    IKZF1 50344.378 7p13-p11.1
    IL6 22766.766 7p21
    JAZF1 27870.196 7p15.2-p15.1
    LIMK1 73498.156 7q11.23
    MET 116312.459 7q31
    MNX1 156797.547 7q36
    MUC17 100663.364 7q22.1
    NPY 24323.807 7p15.1
    NRCAM 107788.084 7q31.1-q31.2
    NRF1 129269.919 7q32
    POU6F2 39017.609 7p14-p13
    SFRP4 37945.536 7p14.1
    SHH 155595.558 7q36
    SPAM1 123565.286 7q31.3
    STEAP1 89783.689 7q21
    STEAP2 89841.174 7q21
    TAC1 97361.271 7q21-q22
    TRB@ 142495.143 7q34
    TRG@ 38301.790 7p14
    TRIM24 138145.079 7q32-q34
    TRPV6 142568.960 7q33-q34
    TWIST1 19155.093 7p21.2
    Other genes
    possibly implicated
    in cancer
    Ordered by Name Ordered by Location
     Kb pter-qter
    ABCB4 87031.361 7q21.1
    ABCB8 150725.510 7q36
    ABCF2 150904.923 7q36
    ACHE 100487.616 7q22
    ACTR3B 152456.851 7q36.1
    ADAM22 87563.702 7q21
    ADAP1 937.538 7p22.3
    ADCK2 140372.953 7q32-q34
    ADCYAP1R1 31092.142 7p14
    AGK 141251.078 7q34
    AGR2 16832.266 7p21.3
    AGR3 16899.031 7p21.1
    AHCYL2 128864.864 7q32.1
    AHR 17338.276 7p15
    AKR1B10 134212.344 7q33
    AKR1B1 134127.107 7q35
    ALKBH4 102096.697 7q22.1
    AMPH 38423.307 7p14-p13
    AP1S1 100797.686 7q22.1
    AQP1 30951.468 7p14
    ARAF2P 62864.757 7q11.21
    ARF5 127228.517 7q31.3
    ARHGEF5 144052.489 7q33-q35
    ARMC10 102715.328 7q22.1
    ARPC1A 98923.510 7q22.1
    ARPC1B 98972.329 7q22.1
    ATP6V0A4 138391.040 7q33-q34
    ATP6V1F 128502.898 7q32
    AZGP1 99564.352 7q22.1
    BBS9 33169.152 7p14
    BLACE 155149.682 7q36
    BPGM 134331.531 7q31-q34
    BRI3 97910.979 7q21.3
    BUD31 99006.601 7q22.1
    C7orf11 40172.343 7p14.1
    C7orf54 127637.854 7q31
    C7orf63 89874.488 7q21.13
    C7orf68 128095.884 7q32.1
    CALCR 93053.799 7q21.3
    CALD1 134464.164 7q33
    CAMK2B 44256.749 22q12|7p14.3-p14.1
    CARD11 2945.769 7p22
    CASP2 142985.402 7q34-q35
    CATR1 129546.219 7q32
    CAV2 116139.444 7q31.1
    CBLL1 107384.279 7q22.3-q31.1
    CBX3 26241.099 7p15.2
    CCDC136 128432.099 7q33
    CCL24 75441.116 7q11.23
    CCM2 45067.233 7p13
    CCT6A 56119.378 7p11.2
    CD36 80267.832 7q11.2
    CDK13 39989.959 7p13
    CDK14 90338.712 7q21-q22
    CDK5 150750.903 7q36
    CDK6 92234.237 7q21-q22
    CFTR 117120.017 7q31.2
    CHN2 29519.486 7p15.3
    CHST12 2443.259 7p22
    CLDN12 90032.796 7q21
    CLDN3 73183.328 7q11.23
    CNTNAP2 145813.453 7q35-q36
    COPG2 130146.080 7q32
    COPS6 99686.583 7q22.1
    CPA4 129932.974 7q32
    CRHR2 30692.863 7p14.3
    CUL1 148395.933 7q36.1
    CUX1 101459.292 7q22.1
    CYCS 25158.277 7p15.3
    CYP3A43 99425.636 7q21.1
    CYP3A4 99354.604 7q21.1
    CYP3A5 99245.818 7q21.1
    CYTH3 6201.414 7p22.1
    DBF4 87505.544 7q21.3
    DDC 50526.136 7p12.2
    DDX56 44605.404 7p13
    DFNA5 24737.974 7p15
    DLD 107531.586 7q31-q32
    DLX5 96649.704 7q22
    DNAJB6 157129.710 7q36.3
    DNAJB9 108210.356 7q31|14q24.2-q24.3
    DNAJC2 102952.922 7q22
    EEPD1 36192.836 7p14.2
    EGFR 55086.725 7p12
    EIF3B 2394.474 7p22.3
    ELN 73442.427 DKFZp434L134, NY-REN-21, Zipro1
    EN2 155250.824 7q36
    EPDR1 37960.163 7p14.1
    EPHB4 100400.187 7q22
    EPHB6 142552.792 7q33-q35
    EPO 100318.423 7q22
    ETV1 13930.858 7p21.3
    EXOC4 132937.823 7q31
    EZH2 148504.475 7q35-q36
    FAM3C 120988.907 7q31
    FASTK 150773.708 7q35
    FEZF1 121941.449 7q31.32
    FGL2 76822.689 7q11.23
    FLNC 128470.483 7q32-q35
    FOXP2 114055.052 7q31
    FTSJ2 2273.928 7p22
    FZD1 90893.783 7q21
    FZD9 72848.109 7q11.23
    GBAS 56032.296 7p12
    GCK 44183.870 7p15.3-p15.1
    GGCT 30536.239 7p15-p14
    GHRHR 31003.636 7p14
    GIMAP4 150264.458 7q36.1
    GLI3 42000.550 7p13
    GNA12 2767.743 7p22.2
    GNAI1 79764.140 7q21
    GNB2 100271.363 7q21.3-q22.1|7q22
    GNG11 93551.016 7q21
    GNGT1 93535.820 7q21.3
    GUSB 65425.675 7q21.11
    HDAC9 18535.369 7p21.1
    HECW1 43152.198 7p14.1-p13
    HGF 81331.445 7q21.1
    HNRNPA2B1 26229.557 7p15
    HOXA10 27210.211 7p15-p14
    HOXA13 27236.499 7p15-p14
    HOXA1 27132.616 7p15.3
    HOXA4 27168.127 7p15-p14
    HOXA5 27180.996 7p15-p14
    HOXA7 27193.340 7p15-p14
    HUS1 48003.783 7p13-p12
    IGF2BP3 23349.829 7p11
    IGFBP1 45927.959 7p13-p12
    IGFBP3 45951.850 7p13-p12
    IMPDH1 128032.331 7q31.3-q32
    ING3 120590.817 7q31
    INHBA 41728.603 7p15-p13
    INSIG1 155089.486 7q36
    IRF5 128580.772 7q32
    ITGB8 20370.725 7p21.1
    KCNH2 150642.050 7q35-q36
    KIAA0415 4815.264 7p22.2
    KLHL7 23145.353 7p15.3
    KPNA7 98771.197 7q22.1
    KRIT1 91828.283 7q21-q22
    LAMB1 107564.246 7q22
    LAT2 73624.087 7q11.23
    LEP 127881.331 7q31.3
    LMTK2 97736.197 7q21.3
    LRRC17 102553.344 7q22.1
    LRRC4 127667.126 7q31.3
    LUZP6 135611.505 7q33
    MACC1 20174.288 7p21.1
    MAD1L1 1855.428 7p22
    MAFK 1570.368 7p22.3
    MAGI2 77646.375 7q21
    MCM7 99690.404 7q21.3-q22.1
    MEOX2 15650.839 7p22.1-p21.3
    MEST 130131.938 7q32
    MKLN1 130794.855 7q32
    MKRN1 140155.984 7q34
    MLL3 151832.012 7q36.1
    MLL5 104654.637 7q22.1
    MLXIPL 73007.524 7q11.23
    MOGAT3 100839.015 7q22.1
    MPP6 24613.085 7p15
    MUC3A 100551.246 7q22
    MYH16 98870.923 7q22.1
    NAMPT 105888.734 7q22.3
    NCAPG2 158424.003 7q36.3
    NCF1 74188.309 7q11.23
    NCF1C 74578.179 7q11.23
    NOD1 30464.144 7p15-p14
    NOS3 150688.144 7q36
    NPTX2 98246.597 7q21.3-q22.1
    NT5C3 33053.744 7p14.3
    NUB1 151038.858 7q36
    NUDT1 2281.857 7p22
    NUP205 135242.662 7q33
    NUPL2 23221.446 7p15
    ORC5L 103766.790 7q22.1
    PAX4 127250.346 7q32
    PDGFA 536.899 7p22
    PDK4 95212.815 7q21.3
    PEG10 94285.637 7q21
    PGAM2 44102.327 7p13-p12
    PHF14 11013.516 7p21.3
    PHKG1 56148.675 7p11.2
    PIK3CG 106505.924 7q22.3
    PIP 142829.174 7q34
    PLEKHA8 30068.288 7p21-p11.2
    PMPCB 102937.873 7q22.1
    PMS2 6012.871 7p22.2
    PMS2CL 6774.935 7p22.1
    PMS2L11 76610.418 7q11.23
    PMS2L1 99918.536 7q22.1
    PMS2L2 74977.963 7q11-q22
    PMS2L3 75137.069 7q11.23
    PMS2L4 66757.423 7q11-q22
    PNPLA8 108112.071 7q31
    PODXL 131185.023 7q32-q33
    POLD2 44154.287 7p13
    POLM 44111.849 7p13
    PON1 94927.671 7q21.3
    PON2 95034.175 7q21.3
    POR 75544.420 7q11.2
    POT1 124462.441 7q31.33
    PPIA 44836.241 7p13
    PPP1R3A 113516.882 7q31.1
    PPP1R9A 94536.949 7q21.3
    PRKAG2 151253.203 7q36.1
    PRKAR1B 588.834 7p22
    PRKAR2B 106685.178 7q22
    PRSS1 142457.319 7q32-qter|7q34
    PRSS2 142479.908 7q34
    PTN 136912.092 7q33-q34
    PTPN12 77167.352 7q11.23
    PTPRN2 157331.751 7q36
    PTPRZ1 121513.159 7q31.3
    PURB 44915.894 7p13
    RAB19 140103.843 7q34
    RABGEF1 66205.643 7q11.21
    RABL5 100956.649 7q22.1
    RAC1 6414.126 7p22
    RALA 39663.162 7p15-p13
    RAPGEF5 22157.909 7p15.3
    RBAK 5085.553 7p22.1
    RELN 103112.233 7q22
    RFC2 73645.834 7q11.23
    RHBDD2 75508.317 7q11.23
    RHEB 151163.098 7q36
    RINT1 105172.532 7q22.3
    RNF133 122337.766 7q31.32
    RNF148 122341.720 7q31.33
    RNF32 156433.401 7q36
    RPA3 7676.577 7p22
    SAMD9 92728.832 7q21.2
    SBDS 66452.690 7q11.21
    SCRN1 29959.720 7p14.3-p14.1
    SEC61G 54819.941 7p11.2
    SEMA3A 83587.665 7p12.1
    SEMA3C 80371.855 7q21-q31
    SEMA3D 84624.874 7q21.11
    SEMA3E 82993.222 7q21.11
    SEPT7 35840.627 7p14.3-p14.1
    SERPINE1 100770.379 7q21.3-q22
    SH2B2 101928.405 7q22
    SHFM1 96318.081 7q21.3-q22.1
    SKAP2 26706.690 7p21-p15
    SLC26A3 107405.912 7q31
    SLC26A4 107301.080 7q31
    SLC26A5 103014.659 7q22.1
    SLC29A4 5322.561 7p22.1
    SLC4A2 150756.657 7q35-q36
    SMARCD3 150936.060 7q35-q36
    SMO 128828.713 7q32.3
    SMURF1 98625.064 7q22.1
    SND1 127292.202 7q31.3
    SOSTDC1 16501.108 7p21.1
    SP4 21467.689 7p15.3
    SRI 87834.432 7q21.1
    SRPK2 104756.824 7q22-q31.1
    SSBP1 141438.176 7q34
    ST7 116593.381 7q31.1-q31.3
    STAG3 99775.538 7q22.1
    STEAP4 87905.750 7q21.12
    STK17A 43622.692 7p12-p14
    STK31 23749.838 7p15.3
    STX1A 73113.535 7q11.23
    TARP 38299.243 7p15-p14
    TAS2R38 141672.431 7q34
    TAX1BP1 27779.738 7p15
    TBRG4 45139.700 7p14-p13
    TBXAS1 139528.952 7q34-q35
    TES 115850.581 7q31.2
    TFEC 115575.202 7q31.2
    TFPI2 93515.745 7q22
    TFR2 100218.039 7q22
    TMEM120A 75616.156 7q11.23
    TMEM176A 150497.854 7q36.1
    TNPO3 128594.948 7q32.1
    TNS3 47314.753 7p12.3
    TP53TG1 86954.540 7q21.1
    TRGV9 38299.242 7p14
    TRIP6 100464.950 7q22
    TRPV5 142605.648 7q35
    TRRAP 98476.113 7q21.2-q22.1
    TSL 27657.032 -
    TSPAN13 16793.351 7p21.1
    UBE2D4 43966.047 7p13
    UBE2H 129472.995 7q32
    UBE3C 156931.655 7q36.3
    UPK3B 76139.745 7q11.2
    UPP1 48128.746 7p12.3
    URGCP 43915.503 7p13
    USP42 6144.550 7p22.1
    VGF 100805.791 7q22.1
    VOPP1 55538.307 7p11.2
    WASL 123322.001 7q31.3
    WNT16 120965.421 7q31
    WNT2 116916.688 7q31.2
    XRCC2 152343.589 7q36.1
    YKT6 44240.578 7p15.1
    YWHAG 75956.108 7q11.23
    ZC3HC1 129658.127 7q32.2
    ZYX 143078.360 7q32

    GeneCards  

    Contributor(s)

    WrittenJul 2004Philippe Dessen, Sakari Knuutila, Jean-Loup Huret
    UpdatedJul 2010Jean-Loup Huret, Philippe Dessen

    Citation

    This paper should be referenced as such :
    Dessen P, Knuutila S, Huret JL . Chromosome . Atlas Genet Cytogenet Oncol Haematol. Jul 2004 .
    URL : http://AtlasGeneticsOncology.org/Indexbychrom/idxa_7.html
    Dessen P, Huret JL . Chromosome . Atlas Genet Cytogenet Oncol Haematol. Jul 2010 .
    URL : http://AtlasGeneticsOncology.org/Indexbychrom/idxa_7.html
    © Atlas of Genetics and Cytogenetics in Oncology and Haematology
    indexed on : Fri Jul 16 13:33:19 CEST 2010
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