Atlas of Genetics and Cytogenetics in Oncology and Haematology


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List of all cancer genes by chromosome

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

- chromosome 13 -
SymbolGoldenPath (Mb)LocationDescription
ZMYM2 19430.810 13q11-q12 zinc finger, MYM-type 2
GJB2 19659.606 13q11-q12 gap junction protein, beta 2, 26kDa
GJB6 19694.101 13q11-q12.1|13q12 gap junction protein, beta 6, 30kDa
IFT88 20039.208 13q12.1 intraflagellar transport 88 homolog (Chlamydomonas)
BRCD1 20039.208 - Breast cancer, ductal, suppressor-1
XRS 20039.208 13q14 X-ray sensitivity
LATS2 20445.176 13q11-q12 LATS, large tumor suppressor, homolog 2 (Drosophila)
SAP18 20612.685 13q12.11 Sin3A-associated protein, 18kDa
FGF9 21143.875 13q11-q12 fibroblast growth factor 9 (glia-activating factor)
SACS 22800.967 13q12 spastic ataxia of Charlevoix-Saguenay (sacsin)
TNFRSF19 23042.723 13q12.11-q12.3 tumor necrosis factor receptor superfamily, member 19
MIPEP 23202.328 13q12 mitochondrial intermediate peptidase
PCOTH 23361.028 13q12 prostate collagen triple helix
SPATA13 23632.887 13q12.12 spermatogenesis associated 13
C1QTNF9 23781.716 13q12.12 C1q and tumor necrosis factor related protein 9
PARP4 23893.075 13q11 poly (ADP-ribose) polymerase family, member 4
ATP12A 24152.695 13q12.12|13q12.1-q12.3 ATPase, H+/K+ transporting, nongastric, alpha polypeptide
RNF17 24236.301 13q12.12 ring finger protein 17
CENPJ 24354.412 13q12.12 centromere protein J
ATP8A2 24844.209 13q12 ATPase, aminophospholipid transporter-like, class I, type 8A, member 2
RNF6 25684.906 13q12.2 ring finger protein (C3H2C3 type) 6
CDK8 25726.756 13q12 cyclin-dependent kinase 8
WASF3 26029.840 13q12 WAS protein family, member 3
RASL11A 26742.464 - RAS-like, family 11, member A
GTF3A 26897.547 13q12.3-q13.1 general transcription factor IIIA
LNX2 27018.050 13q12.2 ligand of numb-protein X 2
PDX1 27392.157 13q12.1 pancreatic and duodenal homeobox 1
CDX2 27434.279 13q12.3 caudal type homeobox 2
FLT3 27475.411 13q12 fms-related tyrosine kinase 3
FLT1 27774.389 13q12 fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)
HMGB1 29930.881 13q12 high-mobility group box 1
ALOX5AP 30207.669 13q12 arachidonate 5-lipoxygenase-activating protein
HSPH1 30608.765 13q12.3 heat shock 105kDa/110kDa protein 1
BRCA2 31787.617 13q12.3 breast cancer 2, early onset
PDS5B 32058.624 13q12.3 PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)
STARD13 32575.307 13q12-q13 StAR-related lipid transfer (START) domain containing 13
RFC3 33290.206 13q12.3-q13 replication factor C (activator 1) 3, 38kDa
NBEA 34414.456 13q13 neurobeachin
DCLK1 35243.478 13q13 doublecortin-like kinase 1
SPG20 35773.777 13q13.3 spastic paraplegia 20 (Troyer syndrome)
CCNA1 35904.495 13q12.3-q13 cyclin A1
FAM48A 36481.453 13q13.3 family with sequence similarity 48, member A
POSTN 37034.780 13q13.3 periostin, osteoblast specific factor
TRPC4 37108.795 13q13.1-q13.2 transient receptor potential cation channel, subfamily C, member 4
LHFP 38815.030 13q12 lipoma HMGIC fusion partner
TNAP 38913.303 - TRAFs and NIK-associated protein
FOXO1 40027.801 13q14.1 forkhead box O1
ELF1 40404.165 13q13 E74-like factor 1 (ets domain transcription factor)
C13orf15 40929.542 13q14.11 chromosome 13 open reading frame 15
AKAP11 41744.289 13q14.11 A kinase (PRKA) anchor protein 11
TNFSF11 42043.795 13q14 tumor necrosis factor (ligand) superfamily, member 11
EPSTI1 42360.122 13q13.3 epithelial stromal interaction 1 (breast)
DNAJC15 42495.362 13q14.1 DnaJ (Hsp40) homolog, subfamily C, member 15
TSC22D1 43905.661 13q14 TSC22 domain family, member 1
TPT1 44809.304 13q12-q14 tumor protein, translationally-controlled 1
CPB2 45525.323 13q14.11 carboxypeptidase B2 (plasma)
LCP1 45598.060 13q14.3 lymphocyte cytosolic protein 1 (L-plastin)
HTR2A 46305.514 13q14-q21 5-hydroxytryptamine (serotonin) receptor 2A
ITM2B 47705.309 13q14.3 integral membrane protein 2B
RB1 47775.884 13q14.2 retinoblastoma 1 (including osteosarcoma)
P2RY5 47883.185 13q14 purinergic receptor P2Y, G-protein coupled, 5
RCBTB2 47961.102 13q14.3 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
PHF11 48968.529 13q14.3 PHD finger protein 11
RCBTB1 49004.083 13q14 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
ARL11 49100.625 13q14.3 ADP-ribosylation factor-like 11
KPNA3 49171.463 13q14.3 karyopherin alpha 3 (importin alpha 4)
TRIM13 49469.144 13q14 tripartite motif-containing 13
KCNRG 49487.391 13q14.3 potassium channel regulator
DLEU2 49511.144 13q14.3 deleted in lymphocytic leukemia, 2
DLEU1 49554.573 13q14.3 deleted in lymphocytic leukemia, 1
FAM10A4 49644.154 13q14.3 family with sequence similarity 10, member A4
DLEU7 50184.760 13q14.3 deleted in lymphocytic leukemia, 7
RNASEH2B 50381.928 13q14.3 ribonuclease H2, subunit B
INTS6 50921.624 13q14.12-q14.2 integrator complex subunit 6
ATP7B 51404.806 13q14.3 ATPase, Cu++ transporting, beta polypeptide
NEK5 51536.903 13q14.3 NIMA (never in mitosis gene a)-related kinase 5
NEK3 51604.781 13q14.13 NIMA (never in mitosis gene a)-related kinase 3
OLFM4 52500.973 13q21.1 olfactomedin 4
PIBF1 72254.231 13q22.1 progesterone immunomodulatory binding factor 1
KLF5 72531.143 13q22.1 Kruppel-like factor 5 (intestinal)
KLF12 73158.151 13q22 Kruppel-like factor 12
TBC1D4 74756.810 13q22.2 TBC1 domain family, member 4
UCHL3 75021.928 13q22.2 ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)
SCEL 77007.860 13q22 sciellin
EDNRB 77368.544 13q22 endothelin receptor type B
POU4F1 78071.233 13q31.1 POU class 4 homeobox 1
RBM26 78792.100 13q31.1 RNA binding motif protein 26
SPRY2 79808.115 13q31.1 sprouty homolog 2 (Drosophila)
GPC5 90848.888 13q32 glypican 5
DCT 93889.842 13q32 dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)
ABCC4 94470.084 13q32 ATP-binding cassette, sub-family C (CFTR/MRP), member 4
CLDN10 94883.859 13q31-q34 claudin 10
DNAJC3 95127.484 13q32 DnaJ (Hsp40) homolog, subfamily C, member 3
PSMC6P1 95541.094 8q12.1 proteasome (prosome, macropain) 26S subunit, ATPase, 6 pseudogene
RAP2A 96884.477 13q34 RAP2A, member of RAS oncogene family
RANBP5 97403.930 13q32.2 RAN binding protein 5
KRAS1P 97403.930 6p12-p11 v-Ki-ras1 Kirsten rat sarcoma 1 viral oncogene homolog, processed pseudogene
FARP1 97593.435 13q32.2 FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
STK24 97900.456 13q31.2-q32.3 serine/threonine kinase 24 (STE20 homolog, yeast)
SLC15A1 98134.057 13q33-q34 solute carrier family 15 (oligopeptide transporter), member 1
EBVS1 98744.791 1p35 Epstein Barr virus insertion site 1
PCCA 99539.338 13q32 propionyl Coenzyme A carboxylase, alpha polypeptide
FGF14 101173.038 13q34 fibroblast growth factor 14
ERCC5 102296.175 13q22|13q33 excision repair cross-complementing rodent repair deficiency, complementation group 5 (xeroderma pigmentosum, complementation group G (Cockayne syndrome))
SLC10A2 102494.351 13q33 solute carrier family 10 (sodium/bile acid cotransporter family), member 2
EFNB2 105940.099 13q33 ephrin-B2
LIG4 107657.794 13q33-q34 ligase IV, DNA, ATP-dependent
TNFSF13B 107719.978 13q32-q34 tumor necrosis factor (ligand) superfamily, member 13b
IRS2 109204.185 13q34 insulin receptor substrate 2
COL4A1 109599.311 13q34 collagen, type IV, alpha 1
COL4A2 109757.632 13q34 collagen, type IV, alpha 2
RAB20 109973.415 13q34 RAB20, member RAS oncogene family
ING1 110163.084 13q34 inhibitor of growth family, member 1
ANKRD10 110328.889 13q34 ankyrin repeat domain 10
ARHGEF7 110565.783 13q34 Rho guanine nucleotide exchange factor (GEF) 7
SOX1 111769.914 13q34 SRY (sex determining region Y)-box 1
MCF2L 112704.069 13q34 MCF.2 cell line derived transforming sequence-like
F7 112808.106 13q34 coagulation factor VII (serum prothrombin conversion accelerator)
F10 112825.114 13q34 coagulation factor X
CUL4A 112911.087 13q34 cullin 4A
LAMP1 112999.470 13q34 lysosomal-associated membrane protein 1
TFDP1 113287.057 13q34 transcription factor Dp-1
GRK1 113369.598 13q34 G protein-coupled receptor kinase 1
GAS6 113546.913 13q34 growth arrest-specific 6
RASA3 113765.297 13q34 RAS p21 protein activator 3
CDC16 114018.464 13q34 cell division cycle 16 homolog (S. cerevisiae)


These entries belong to a list of genes implicated in cancer which is a compilation of genes
from Atlas of Genetics and Cytogenetics and some other genes selected for their interest.


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