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Chromosome 15

Chromosome 15 : G-banding, diagram and R-banding - Claude Léonard, Jean-Loup Huret

Leukaemia     

dic(1;15)(p11;p11)
t(5;15)(p15;q11-13)
t(5;15)(q33;q22)
t(11;15)(q23;q14)
t(12;15)(p13;q25)
15q13-15 Rearrangements
+15 or trisomy 15 (as sole autosomal abnormality)
t(15;17)(q22;q21)
t(15;17)(q22;q21) in treatment related leukemia
t(15;21)(q22;q22)

Solid Tumors     

t(9;17)(q22;q11)
t(9;15)(q22;q21)
t(12;15)(p13;q25)
t(11;22)(q24;q12)
t(15;19)(q14;p13)

Cancer prone diseases     

Bloom syndrome

All Genes by Location (Kb)
Chromosome 15 by location

Losses / Amplicons     

BONE/SOFT TISSUE

External links     

  • Chromosome 15 - HUGO Chromosomes
  • Chromosome 15 - GoldenPath - Santa Cruz
  • Chromosome 15 - Ensembl Project
  • Chromosome 15 - Map View - NCBI
  • Chromosome 15 - GDB (Genome Data Base)
  • Chromosome 15 - OMIM Gene map
  • Chromosome 15 - Genomic Variants
  • Chromosome 15 - HAPMAP Project
  • Chromosome 15 - Genome Channel - ORNL
  • Chromosome 15 - LaunchPad HGMIS
  • Chromosome 15 - Human Protein Atlas
  • Chromosome 15 - SpliceNest
  • Human BAC Resource (NCBI)
  • FISH-mapped BACs (CCAP)
  • Genetic Maps (CHLC)
  • YACs mapped by FISH (Bari)
  • PCP (Partial Chromosome Paints) (Bari)
  • Positional Cloning Project (Berlin Dahlem)
  • Mouse homology - OMIM - NCBI
  • Cancer GeneWeb
  • GeneCards (Weizmann)
  • Human Proteomics Initiative (Expasy)

    • Genes

    Annotated genes
    SymbolLocation (Kb)Location (pter-qter)
    BCL8 19130.067 15q11-q13
    C15orf55 32425.358 15q14
    THBS1 37660.572 15q15
    BUB1B 38240.530 15q15
    PLCB2 38367.392 15q15
    CASC5 38673.739 15q14
    TCF12 54998.125 15q21
    GCNT3 57696.080 15q21.3
    PML 72074.067 15q22
    NEIL1 73426.463 15q24.2
    CTSH 77001.147 15q24-q25
    RASGRF1 77041.341 15q24
    NTRK3 86220.992 15q25
    BLM 89061.583 15q26.1
    Other genes
    possibly implicated
    in cancer
    SymbolLocation (pter-qter)
    NIPA2 20556.790 15q11.2
    SNRPN 22652.791 15q11.2
    SNURF 22751.163 15q12
    PAR1 22931.881 15q11.2
    UBE3A 23133.490 15q11-q13
    GABRB3 24339.789 15q11.2-q12
    OCA2 25673.616 15q11.2-q12
    HERC2 26029.783 15q13
    NDNL2 27347.651 15q13.1
    TJP1 27779.651 15q13
    MTMR15 28983.421 15q13.2-q13.3
    TRPM1 29080.844 15q13-q14
    MLVI2 29080.845 5p14
    CHRNA7 30110.018 15q14
    ARHGAP11A 30694.983 15q13.2
    SCG5 30721.252 15q13-q14
    GREM1 30797.497 15q13-q15
    AVEN 31945.721 15q13.1
    SLC12A6 32309.490 15q13-q15
    MEIS2 34970.525 15q14
    SPRED1 36331.808 15q14
    RASGRP1 36567.598 15q15
    EIF2AK4 38013.639 15q15.1
    BMF 38167.383 15q14
    PAK6 38319.368 15q14
    RAD51 38774.651 15q15.1
    FAM82C 38815.378 15q15.1
    DNAJC17 38847.363 15q15.1
    PPP1R14D 38894.943 15q15.1
    SPINT1 38923.538 15q15.1
    DNAJB1P 38951.733 2q32.3
    DLL4 39008.839 15q14
    INOC1 39058.372 15q15.1
    ITPKA 39573.414 15q14-q21
    LTK 39583.132 15q15.1-q21.1
    TYRO3 39638.524 15q15.1-q21.1
    MAPKBP1 39854.004 15q15.1
    VPS39 40238.192 15q15.1
    TTBK2 40823.838 15q15.2
    CCNDBP1 41265.442 15q14-q15
    LCMT2 41407.268 15q15.3
    TP53BP1 41486.699 15q15-q21
    CKMT1B 41672.544 15q15
    PDIA3 41825.882 15q15
    WDR76 41906.500 15q15.3
    CASC4 42368.221 15q15.3
    B2M 42790.977 15q21-q22.2
    DUOX2 43172.144 15q15.3
    DUOXA2 43193.816 15q15.1
    DUOXA1 43196.979 15q21.1
    DUOX1 43209.484 15q15.3
    C15orf48 43510.055 15q21.1
    SLC30A4 43561.970 15q11.2-q21.3|15q21.1
    C15orf21 43590.626 15q21.1
    DUT 46410.913 15q15-q21.1
    FBN1 46487.797 15q21.1
    COPS2 47206.834 15q21.2
    FGF7 47502.751 15q15-q21.1
    DTWD1 47700.588 15q21.2
    HDC 48321.439 15q21-q22
    USP8 48503.871 15q21.2
    TRPM7 48639.782 15q21
    TNFAIP8L3 49136.093 15q21.2
    CYP19A1 49288.964 15q21.1
    GLDN 49421.005 15q21.2
    TMOD2 49831.102 15q21.1-q21.2
    TMOD3 49909.181 15q21.1-q21.2
    MAPK6 50098.739 15q21
    BCL2L10 50189.116 15q21
    GNB5 50200.415 15q21.2
    ONECUT1 50836.645 15q21.1-q21.2
    RAB27A 53283.094 15q15-q21.1
    PIGB 53398.425 15q21-q22
    CCPG1 53434.730 15q21.1
    NEDD4 53906.423 15q
    ALDH1A2 56032.920 15q22.1
    AQP9 56217.700 15q22.1-q22.2
    ADAM10 56675.802 15q2|15q22
    RNF111 57067.157 15q21
    CCNB2 57184.612 15q22.2
    LDHAL6B 57286.334 15q22.2
    BNIP2 57742.356 15q22.2
    FOXB1 58083.713 15q21-q26
    ANXA2 58426.644 15q21-q22
    RORA 58576.756 15q21-q22
    TLN2 60726.802 15q15-q21
    TPM1 61121.891 15q22.1
    RPS27L 61232.593 15q22.2
    RAB8B 61268.781 15q22.2
    APH1B 61356.844 15q22.2
    CA12 61402.784 15q22
    HERC1 61687.870 15q22
    DAPK2 61986.288 15q22.31
    SNX1 62175.230 15q22.31
    PPIB 62235.068 15q21-q22
    CSNK1G1 62244.771 15q22.1-q22.31
    KIAA0101 62444.266 15q22.31
    RASL12 63132.730 15q11.2-q22.33
    PDCD7 63196.771 15q22.31
    DENND4A 63741.170 15q22.31
    RAB11A 63948.850 15q21.3-q22.31
    MAP2K1 64466.679 15q22.1-q22.33
    SMAD6 64781.688 15q21-q22
    SMAD3 65145.249 15q22.33
    MAP2K5 65622.075 15q23
    PIAS1 66133.626 15q
    CALML4 66270.098 15q23
    ITGA11 66381.104 15q23
    ANP32A 66859.260 15q22.3-q23
    NOX5 67009.918 15q23
    GLCE 67240.027 15q23
    KIF23 67493.742 15q23
    TLE3 68127.597 15q22
    PKM2 70278.424 15q22
    ARIH1 70553.721 15q24
    NEO1 71131.928 15q22.3-q23
    CD276 71763.675 15q23-q24
    LOXL1 72005.842 15q24-q25|15q22
    STOML1 72062.614 15q24-q25
    CYP11A1 72417.156 15q23-q24
    CLK3 72687.766 15q24
    CYP1A1 72798.944 15q22-q24
    CYP1A2 72828.237 15q24
    CSK 72861.768 15q23-q25
    LMAN1L 72892.247 15q24.1
    ULK3 72915.512 15q24.1
    DHX40P 73337.952 17q23.2
    SIN3A 73450.330 15q24.2
    PTPN9 73546.516 15q24.2
    IMP3 73718.491 15q24
    CSPG4 73753.718 15q24.2
    UBE2Q2 73922.855 15q24.2
    NRG4 74022.899 15q24.2
    RCN2 75011.171 15q23
    MAPK8IPP 75500.285 -
    HMG20A 75500.298 15q24
    LINGO1 75692.424 15q24.3
    CIB2 76184.046 15q24
    DNAJA4 76343.551 15q25.1
    CRABP1 76419.758 15q24
    ADAMTS7 76838.600 15q24.2
    ST20 77978.237 15q25.1
    BCL2A1 78040.290 15q24.3
    MESDC2 79055.150 15q13
    IL16 79276.274 15q26.3
    MEX3B 80121.183 15q25.2
    ADAMTSL3 82113.842 15q25.2
    SLC28A1 83228.917 15q25-q26
    AKAP13 83724.875 15q24-q25
    DET1 86856.718 15q25.3
    ISG20L1 86965.593 15q26.1
    ISG20 86983.043 15q26
    MFGE8 87242.920 15q25
    POLG 87660.563 15q25
    LOC145908 88120.593 15q11.1
    ANPEP 88129.130 15q25-q26
    IDH2 88428.218 15q26.1
    CIB1 88574.482 15q25.3-q26
    IQGAP1 88732.477 15q26.1
    FURIN 89212.889 15q26.1
    FES 89228.713 15q26.1
    UNC45A 89279.219 15q26.1
    PRC1 89310.277 15q26.1
    ST8SIA2 90738.144 15q26
    WT3 90738.144 16q
    CHD2 91244.555 15q26
    NR2F2 94674.950 15q26
    IGF1R 97010.284 15q26.3
    DMN 97462.809 15q26.3
    HSP90B2P 97616.371 15q26.3
    ADAMTS17 98329.166 15q24
    ALDH1A3 99237.532 15q26.3
    PCSK6 99661.657 15q26.3

    GeneCards   GDB - List of genes

    This page should be referenced as such :
    Dessen P, Knuutila S, Huret JL Chromosome 15. Atlas Genet Cytogenet Oncol Haematol. 2002.
    URL : http://AtlasGeneticsOncology.org/Indexbychrom/idxa_15.html
    © Atlas of Genetics and Cytogenetics in Oncology and Haematology
    indexed on : Fri May 16 20:24:40 2008
    Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case reports   Journals   Portal   Teaching   

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