Atlas of Genetics and Cytogenetics in Oncology and Haematology

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Chromosome 7

Chromosome 7 : G-banding, diagram and R-banding - Claude Léonard, Jean-Loup Huret

Leukaemia     

t(1;7)(q10;p10)
t(1;7)(p36;q34)
t(1;7)(p34;q34)
t(1;7)(q21;q22)
t(1;7)(p32;q34)
t(3;7)(q26;q21)
t(3;7)(q27;p12-13)
t(5;7)(q33;q11)
t(6;7)(q23;q34)
-7/del(7q) in childhood
-7/del(7q) in adults
del(7q) in non-Hodgkin's lymphoma (NHL)
inv(7)(p15q34)
t(7;8)(q34;p11)
dic(7;9)(p11-13;p11)
t(7;9)(q11;p13)
t(7;9)(q34;q32)
t(7;9)(q34;q34)
t(7;10)(q34;q24)
t(7;11)(p15;p15)
t(7;11)(q35;p13)
t(7;12)(q36;p13)
t(7;12)(p12;q13)
t(7;12)(q34;p13)
t(7;14)(q35;q32.1)
t(7;14)(p15;q11)
t(7;14)(p15;q32) (AML, T-ALL; - ; rare)
t(7;14)(q21;q13)
t(7;14)(q21;q32) (CLD; ERVWE1/IgH ; rare)
t(7;14)(q21;q32) (CLD; CDK6/IgH ; rare)
t(7;14)(q22;q11)
t(7;17)(p15;q23)
t(7;17)(q32-34;q23)
t(7;19)(q34;p13)
t(7;21)(p22;q22)

Solid Tumors     

inv(7)(q21q34)
del(7)(q22;q32)
t(7;8)(q31;q13)
t(7;8)(p22;q12)
t(7;12)(q22;q13-14)
t(7;12)(p22;q13)
t((7;16)(q33;p11)
t(7;17)(p15;q21)
t(7;22)(p22;q12)
t(7;22)(p22;q12)

Cancer prone diseases     

Currarino Syndrome
Pallister Hall Syndrome (PHS)
Shwachman-Diamond Syndrome (SDS)
Stiff-person syndrome
Hereditary papillary renal cell carcinoma

All Genes by Location (Kb)
Chromosome 7 by location

Losses / Amplicons     

BONE/SOFT TISSUE

External links     

  • Chromosome 7 - HUGO Chromosomes
  • Chromosome 7 - GoldenPath - Santa Cruz
  • Chromosome 7 - Ensembl Project
  • Chromosome 7 - Map View - NCBI
  • Chromosome 7 - GDB (Genome Data Base)
  • Chromosome 7 - OMIM Gene map
  • Chromosome 7 - Genomic Variants
  • Chromosome 7 - HAPMAP Project
  • Chromosome 7 - Genome Channel - ORNL
  • Chromosome 7 - LaunchPad HGMIS
  • Chromosome 7 - Human Protein Atlas
  • Chromosome 7 - SpliceNest
  • Human BAC Resource (NCBI)
  • FISH-mapped BACs (CCAP)
  • Genetic Maps (CHLC)
  • YACs mapped by FISH (Bari)
  • PCP (Partial Chromosome Paints) (Bari)
  • Positional Cloning Project (Berlin Dahlem)
  • Mouse homology - OMIM - NCBI
  • Cancer GeneWeb
  • GeneCards (Weizmann)
  • IMGT, the international ImMunoGeneTics database (Montpellier,France)
  • Human Proteomics Initiative (Expasy)

    • Genes

    Annotated genes
    Ordered by Name Ordered by Location
     Kb pter-qter
    ACTB 5533.313 7p15-p12
    IL6 22733.343 7p21
    HOXA9 27168.583 7p15-p14
    HOXA11 27187.302 7p15-p14
    TRG@ 37926.688 7p14
    POU6F2 39012.933 7p14-p13
    IKZF1 50314.924 7p13-p11.1
    GRB10 50625.260 7p12-p11.2
    CLDN4 72883.129 7q11.23
    HIP1 75001.345 7q11.23
    ABCB1 86970.884 7q21.1
    AKAP9 91408.128 7q21-q22
    ERVWE1 91935.631 7q21-q22
    COL1A2 93861.809 7q22.1
    MUC17 100450.084 7q22.1
    MET 116099.695 7q31
    CREB3L2 137210.267 7q34
    TRIM24 137795.619 7q32-q34
    BRAF 140080.754 7q34
    TRB@ 141612.136 7q34
    SHH 155288.319 7q36
    MNX1 156490.308 7q36
    Other genes
    possibly implicated
    in cancer
    Ordered by Name Ordered by Location
     Kb pter-qter
    PDGFA 503.425 7p22
    PRKAR1B 555.913 7p22
    CENTA1 904.066 7p22.3
    CYP2W1 989.361 7p22.3
    GPER 1094.249 7p22.3
    MAFK 1536.894 7p22.3
    MAD1L1 1821.954 7p22
    FTSJ2 2240.454 7p22
    NUDT1 2248.383 7p22
    EIF3B 2361.000 7p22.2
    CHST12 2409.785 7p22
    GNA12 2734.269 7p22.2
    CARD11 2912.295 7p22
    KIAA0415 4781.790 7p22.2
    RBAK 5052.079 7p22.1
    FSCN1 5598.980 7p22
    PMS2 5979.397 7p22.2
    USP42 6111.076 7p22.1
    PSCD3 6167.939 7p22.1
    RAC1 6380.651 7p22
    RPA3 7643.102 7p22
    PHF14 10980.041 7p21.3
    ETV1 13897.383 7p21.3
    TSPAN13 16759.876 7p21.1
    AGR2 16797.961 7p21.3
    AGR3 16865.556 7p21.1
    AHR 17304.832 7p15
    HDAC9 18502.410 7p21.1
    TWIST1 19121.618 7p21.2
    ITGB8 20337.250 7p15.3
    ABCB5 20653.741 7p15.3
    RAPGEF5 22124.434 7p15.3
    KLHL7 23111.927 7p15.3
    NUPL2 23188.011 7p15
    GPNMB 23252.841 7p15
    IGF2BP3 23316.354 7p11
    STK31 23716.468 7p15.3
    NPY 24290.334 7p15.1
    MPP6 24579.610 7p15
    CYCS 25124.802 7p15.2
    HNRNPA2B1 26196.081 7p15
    CBX3 26207.849 7p15.2
    HOXA1 27099.141 7p15.3
    HOXA4 27134.651 7p15-p14
    HOXA5 27147.521 7p15-p14
    HOXA7 27159.865 7p15-p14
    HOXA10 27176.736 7p15-p14
    HOXA13 27203.024 7p15-p14
    TSL 27623.557 -
    TAX1BP1 27746.263 7p15
    JAZF1 27836.721 7p15.2-p15.1
    CHN2 29200.646 7p15.3
    PLEKHA8 30034.813 7p21-p11.2
    NOD1 30430.675 7p15-p14
    C7orf24 30502.764 7p15-p14
    AQP1 30917.993 7p14
    GHRHR 30970.161 7p14
    ADCYAP1R1 31058.667 7p14
    BBS9 33135.677 7p14
    SEPT7 35807.152 7p14.3-p14.1
    ANLN 36395.957 7p15-p14
    SFRP4 37912.068 7p14.1
    EPDR1 37926.688 7p14.1
    TRGV9 38265.767 7p14
    AMPH 38389.832 7p14-p13
    RALA 39629.687 7p15-p13
    CDC2L5 39956.484 7p13
    C7orf11 40138.868 7p14.1
    INHBA 41695.128 7p15-p13
    GLI3 41967.075 7p13
    HECW1 43118.723 7p14.1-p13
    STK17A 43589.217 7p12-p14
    URG4 43882.028 7p13
    UBE2D4 43932.572 7p13
    PGAM2 44068.852 7p13-p12
    POLM 44078.374 7p13
    POLD2 44120.812 7p13
    GCK 44150.395 7p15.3-p15.1
    YKT6 44207.103 7p15.1
    CAMK2B 44225.422 22q12|7p14.3-p14.1
    DDX56 44571.929 7p13
    PPIA 44802.766 7p13
    PURB 44882.419 7p13
    ERVK6 44968.786 7p22.1
    TBRG4 45106.225 7p14-p13
    IGFBP1 45894.484 7p13-p12
    IGFBP3 45918.375 7p13-p12
    TNS3 47281.277 7p12.3
    HUS1 47970.308 7p13-p12
    HVBS6 47970.308 4q32
    HVBS7 47970.308 18q11.1-q11.2
    UPP1 48094.880 7p12.3
    ARAFPS2 53070.843 7q11.21
    SEC61G 54787.435 7p11.2
    EGFR 55054.219 7p12
    GBAS 55999.790 7p12
    CCT6A 56086.872 7p11.2
    PHKG1 56116.169 7p11.2
    GUSB 65063.110 7q21.11
    TP53L 65307.749 -
    RABGEF1 65843.078 7q11.21
    SBDS 66090.125 7q11.21
    PMS2L4 66394.858 7q11-q22
    TFAMP1 72056.771 7p22.3
    FZD9 72486.045 7q11.23
    BCL7B 72588.622 7q11.23
    CLDN3 72821.264 7q11.23
    ELN 73080.363 7q11.23
    LIMK1 73136.092 7q11.23
    RFC2 73283.770 7q11.23
    NCF1 73826.245 7q11.23
    PMS2L8 73944.358 7q22
    PMS2L5 73944.837 7q11-q22
    NCF1C 74210.381 7q11.23
    PMS2L2 74780.552 7q11-q22
    PMS2L3 74975.006 7q11.23
    CCL24 75279.052 7q11.23
    POR 75382.356 7q11.2
    TMEM120A 75454.244 7q11.23
    HSPB1 75769.859 7q11.23
    YWHAG 75794.053 7q11.23
    UPK3B 75977.681 7q11.2
    PMS2L11 76448.389 7q11.23
    PTPN12 77004.771 7q11.23
    MAGI2 77484.310 7q21
    GNAI1 79602.076 7q21
    CD36 80069.459 7q11.2
    SEMA3C 80209.791 7q21-q31
    HGF 81209.943 7q21.1
    SEMA3E 82831.158 7q21.11
    SEMA3A 83425.601 7p12.1
    KPNA7 84450.808 7q22.1
    DMTF1 86619.860 7q21
    TP53AP1 86792.476 7q21.1
    DBF4 87343.480 7q21.3
    ADAM22 87401.638 7q21
    SRI 87672.368 7q21.1
    STEAP4 87743.687 7q21.12
    STEAP1 89621.625 7q21
    STEAP2 89681.070 7q21
    CLDN12 89870.732 7q21
    PGA@ 90063.878 11q13
    PFTK1 90176.648 7q21-q22
    KRIT1 91666.219 7q21-q22
    CDK6 92072.173 7q21-q22
    CALCR 92891.735 7q21.3
    TFPI2 93353.681 7q22
    GNGT1 93373.756 7q21.3
    GNG11 93388.952 7q21
    PEG10 94123.573 7q21
    PPP1R9A 94374.885 7q21.3
    PON1 94764.924 7q21.3
    PDK4 95050.749 7q21.3
    SHFM1 96156.017 7q21.3-q22.1
    TAC1 97199.311 7q21-q22
    ASNS 97319.378 7q21.3
    LOC4951 97451.949 7q21.2
    LMTK2 97574.133 7q21.3
    NPTX2 98084.545 7q21.3-q22.1
    TRRAP 98314.049 7q21.2-q22.1
    SMURF1 98463.000 7q22.1
    MYH16 98708.859 7q22.1
    ARPC1B 98810.265 7q22.1
    CYP3A5 99083.754 7q21.1
    CYP3A4 99192.540 7q21.1
    CYP3A43 99263.572 7q21.1
    AZGP1 99402.288 7q22.1
    COPS6 99524.519 7q22.1
    MCM7 99528.340 7q21.3-q22.1
    STAG3 99613.474 7q22.1
    PMS2L1 99756.472 7q22.1
    GNB2 100109.311 7q21.3-q22.1|7q22
    EPO 100156.359 7q22
    EPHB4 100238.123 7q22
    TRIP6 100302.886 7q22
    TDF 100324.400 -
    ACHE 100325.552 7q22
    MUC3A 100389.182 7q22
    SERPINE1 100557.172 7q21.3-q22
    AP1S1 100584.406 7q22.1
    VGF 100592.517 7q22
    MOGAT3 100625.735 7q22.1
    RABL5 100743.369 7q22.1
    CUX1 101246.023 7q22.1
    SH2B2 101715.166 7q22
    ALKBH4 101883.702 7q22.1
    MTVR2 102064.710 17q23
    LRRC17 102340.688 7q22.1
    ARMC10 102502.564 7q22.1
    ZRF1 102740.158 7q22
    RELN 102899.473 7q22
    ORC5L 103595.861 7q22.1
    MLL5 104441.873 7q22.1
    SRPK2 104544.060 7q22-q31.1
    RINT1 104959.768 7q22.2
    NAMPT 105675.968 7q22.2
    PIK3CG 106293.160 7q22.3
    PRKAR2B 106472.414 7q22
    HBP1 106596.696 7q22-q31
    SLC26A4 107088.316 7q31
    CBLL1 107171.822 7q22.3
    SLC26A3 107193.150 7q31
    DLD 107318.822 7q31-q32
    LAMB1 107351.499 7q22
    NRCAM 107575.320 7q31.1-q31.2
    PNPLA8 107899.307 7q31
    DNAJB9 107997.592 7q31|14q24.2-q24.3
    TRY6 112246.439 7q34
    PPP1R3A 113301.622 7q31.1
    FOXP2 113842.288 7q31
    TFEC 115362.438 7q31.2
    TES 115650.271 7q31.2
    CAV2 115926.680 7q31.1
    CAV1 115952.075 7q31.1
    ST7 116380.617 7q31.1-q31.3
    WNT2 116704.518 7q31
    CFTR 116907.253 7q31.2
    ING3 120378.053 7q31
    WNT16 120756.326 7q31
    FAM3C 120776.141 7q31
    PTPRZ1 121300.395 7q31.3
    PTPRZ2 121300.395 1p36.3
    RNF133 122125.002 7q31.32
    RNF148 122128.956 7q31.33
    WASL 123109.237 7q31.3
    SPAM1 123352.565 7q31.3
    POT1 124249.677 7q31.33
    ARF5 127015.753 7q31.3
    PAX4 127037.582 7q32
    SND1 127079.438 7q31.3
    C7orf54 127424.798 7q31
    LRRC4 127454.362 7q31.3
    LEP 127668.567 7q31.3
    IMPDH1 127819.567 7q31.3-q32
    CCDC136 128219.335 7q33
    ATP6V1F 128290.134 7q32
    IRF5 128365.230 7q32
    TNPO3 128382.186 7q32.1
    SMO 128615.949 7q32.3
    AHCYL2 128652.100 7q32.1
    NRF1 129038.791 7q32
    UBE2H 129260.231 7q32
    CATR1 129333.455 7q32
    ZC3HC1 129445.362 7q32.2
    MEST 129913.282 7q32
    COPG2 129933.318 7q32
    MKLN1 130663.178 7q32
    PODXL 130835.561 7q32-q33
    EXOC4 132588.363 7q31
    AKR1B1 133777.647 7q35
    AKR1B10 133862.939 7q33
    BPGM 133982.111 7q31-q34
    CALD1 134114.711 7q33
    NUP205 134893.228 7q33
    PTN 136562.637 7q33-q34
    AMLCR2 136724.925 16q22
    PRO0611 138907.915 1p35.2
    HIPK2 138907.921 7q32-q34
    TBXAS1 139175.421 7q34-q35
    RAB19 139753.916 7q34
    ADCK2 140019.422 7q32-q34
    TAS2R38 141318.900 7q34
    PRSS1 142136.904 7q32-qter|7q34
    PRSS2 142178.778 7q34
    EPHB6 142262.914 7q33-q35
    TRPV6 142279.082 7q33-q34
    PIP 142539.296 7q34
    MYETS1 142670.658 13q14.3
    CASP2 142695.524 7q34-q35
    BRCD2 142788.295 1p36
    NB 142788.295 -
    ZYX 142788.482 7q32
    EPHA1 142798.328 7q34
    ARHGEF5 143683.422 7q33-q35
    CNTNAP2 145444.386 7q35-q36
    CUL1 148026.866 7q36.1
    EZH2 148135.408 7q35-q36
    GIMAP4 149895.391 7q36.1
    TMEM176A 150128.787 7q36.1
    KCNH2 150277.448 7q35-q36
    NOS3 150319.080 7q36
    CDK5 150381.832 7q36
    SLC4A2 150387.590 7q35-q36
    FASTK 150404.641 7q35
    ABCF2 150540.510 7q36
    SMARCD3 150566.993 7q35-q36
    NUB1 150669.791 7q36
    RHEB 150794.032 7q36
    PRKAG2 150884.136 7q36.1
    MLL3 151462.945 7q36.1
    XRCC2 151974.522 7q36.1
    ACTR3B 152087.784 7q36.1
    INSIG1 154720.476 7q36
    BLACE 154842.443 7q36
    EN2 154943.585 7q36
    RNF32 156126.162 7q36
    UBE3C 156624.425 7q36.3
    PTPRN2 157024.516 7q36
    VIS1 158513.628 2q14-q21

    GeneCards   GDB - List of genes

    This page should be referenced as such :
    Dessen P, Knuutila S, Huret JL Chromosome 7. Atlas Genet Cytogenet Oncol Haematol. 2002.
    URL : http://AtlasGeneticsOncology.org/Indexbychrom/idxa_7.html
    © Atlas of Genetics and Cytogenetics in Oncology and Haematology
    indexed on : Tue Jul 1 08:53:52 2008
    Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case reports   Journals   Portal   Teaching   

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