Chromosome 13

Atlas of Genetics and Cytogenetics in Oncology and Haematology


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ENTITIES: by Chromosome band

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22

Chromosome 13


[previous]   13 13p 13q 13p13 13p12 13p11 13q11 13q12 13q13 13q14 13q21 13q22 13q31 13q32 13q33 13q34   [next]

Band 13p11

chr13:10100000-17700000 (7600 Kb)

  • Chromosomal abnormalities in band 13p11
  • Genes in band 13p11 (reference hg38)
  • External links
  • References

    Chromosomal abnormalities in band 13p11

    (click on headers to reorder columns)
    Band 1Band 2ClassEntityPartner 1Partner 2LinksTopographyMorphology[PubMed][Study]
    13p1113q34Cosmic_SVdel(13)(p11q34)  Cosmic_SV [COST195778]prostate__NScarcinoma__adenocarcinoma [COSU537]
    13p1113q34Cosmic_SVdel(13)(p11q34)  Cosmic_SV [COST197056]prostate__NScarcinoma__adenocarcinoma [COSU537]
    13p1113q34Cosmic_SVdel(13)(p11q34)  Cosmic_SV [COST198457]prostate__NScarcinoma__adenocarcinoma [COSU537]
    13p1113q34Cosmic_SVdel(13)(p11q34)  Cosmic_SV [COST198627]prostate__NScarcinoma__adenocarcinoma [COSU537]
      Mitelmander(13)t(1;13)(q12;p11)  Mitelman (CGAP) Anaplastic large cell lymphoma, systemic type  
      Mitelmander(13)t(2;13)(q11;p11)  Mitelman (CGAP)Oral cavitySquamous cell carcinoma  
      Mitelmander(13)t(6;13)(p11;p11)  Mitelman (CGAP) Follicular lymphoma  
      Mitelmandic(12;13)(p11;p11)  Mitelman (CGAP) Acute lymphoblastic leukemia/lymphoblastic lymphoma  
      Mitelmandic(12;13)(p11;p11)  Mitelman (CGAP) Acute myeloid leukemia, NOS  
      Mitelmandic(13;22)(p11;p11)  Mitelman (CGAP)BrainMeningioma  
    13p1113q34Cosmic_SVinv(13)(p11q34)  Cosmic_SV [COST197323]prostate__NScarcinoma__adenocarcinoma [COSU537]
    13p1113q34Cosmic_SVinv(13)(p11q34)  Cosmic_SV [COST197817]prostate__NScarcinoma__adenocarcinoma [COSU537]
    13p1113q32dbCRIDr(13)(p11q32) 10015Anencephaly[PubMed] 
      Mitelmant(1;13)(q12;p11)  Mitelman (CGAP) Anaplastic large cell lymphoma, systemic type  
      Mitelmant(13;15)(p11;q11)  Mitelman (CGAP) Diffuse large B-cell lymphoma  
      Mitelmant(2;13)(q11;p11)  Mitelman (CGAP)Oral cavitySquamous cell carcinoma  
    4q2513p11dbCRIDt(4;13)(q25;p11.2) 10463Aggressive NK Cell Leukemia[PubMed] 
      Mitelmant(6;13)(p11;p11)  Mitelman (CGAP) Follicular lymphoma  
    Xq1313p11dbCRIDt(X;13)(q13.3;p11.1)ATP7A 11297Menkes Disease[PubMed] 

    Genes in band 13p11

    (click on headers to reorder columns)
    GoldenPath hg38Band 1Band 2ClassCloneFusionPartner 1Partner 2LinksTopographyMorphologyPubmedOmimAccession

    [ Bold normal : A; Italic normal :G; Italic small : E ]

    X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22
    [previous]   13 13p 13q 13p13 13p12 13p11 13q11 13q12 13q13 13q14 13q21 13q22 13q31 13q32 13q33 13q34   [next]

    External links

    Mitelman Database [NCI] : Breakpoint 13p11

    [ UCSC ][ enSembl ][ MapView - NCBI ][ 1000Genomes ][ EVS ][ CGWB ][ DGV ][ DBVar ][ OMIM ][ HapMap ][ DECIPHER ] [ ECARUCA ]
    Gene Expression (MSigDB) in 13p11  [ HTC ]  [ NCI ]  [ INV ]

    Global tables

  • Anomalies list (tabulated txt file)
  • Genes list (tabulated txt file)
  • Anomalies list - limited to abnormalities with gene fusions(tabulated txt file)
  • Genes list - limited to genes fusions (tabulated txt file)
  • list of gene fusions for each gene (with origins of the data)
  • list of gene fusions by origin (with topography and morphology)

    References

    Contributor(s)

    Writtenmay 2012Philippe Dessen
      
    Updatedmai 2019Philippe Dessen and Jean-Loup Huret

    Citation

    This paper should be referenced as such :
    Dessen P and Huret JL. Chromosomal band 13p11. Atlas Genet Cytogenet Oncol Haematol. July 2012.
    URL : http://atlasgeneticsoncology.org/Bands/13p11.html
    © Atlas of Genetics and Cytogenetics in Oncology and Haematology
    indexed on : jeu. mai 2 10:30:58 CEST 2019


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