Chromosome 4

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ENTITIES: by Chromosome band

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22

Chromosome 4


[previous]   4 4p 4q 4p16 4p15 4p14 4p13 4p12 4p11 4q11 4q12 4q13 4q21 4q22 4q23 4q24 4q25 4q26 4q27 4q28 4q31 4q32 4q33 4q34 4q35   [next]

Band 4q33

chr4:169200000-171000000 (1800 Kb)

  • Chromosomal abnormalities in band 4q33
  • Genes in band 4q33 (reference hg38)
  • External links
  • References

    Chromosomal abnormalities in band 4q33

    (click on headers to reorder columns)
    Band 1Band 2ClassEntityPartner 1Partner 2LinksTopographyMorphology[PubMed][Study]
    4q134q33Cosmic_SVdel(4)(q13q33)  Cosmic_SV [COST151834]ovary__NScarcinoma__mixed_adenosquamous_carcinoma [COSU585]
    4q33 Cosmic_SVdel(4)(q33)  Cosmic_SV [COST119123]pancreas__NScarcinoma__ductal_carcinoma [COSU328]
    4q33 Cosmic_SVdel(4)(q33)  Cosmic_SV [COST125469]pancreas__NScarcinoma__ductal_carcinoma [COSU328]
    4q33 Cosmic_SVdel(4)(q33)  Cosmic_SV [COST129452]pancreas__NScarcinoma__ductal_carcinoma [COSU328]
    4q33 Cosmic_SVdel(4)(q33)  Cosmic_SV [COST140535]ovary__NScarcinoma__mixed_adenosquamous_carcinoma [COSU585]
    4q33 Cosmic_SVdel(4)(q33)  Cosmic_SV [COST144630]ovary__NScarcinoma__mixed_adenosquamous_carcinoma [COSU585]
    4q33 Cosmic_SVdel(4)(q33)  Cosmic_SV [COST145984]ovary__NScarcinoma__mixed_adenosquamous_carcinoma [COSU585]
    4q33 Cosmic_SVdel(4)(q33)  Cosmic_SV [COST148712]ovary__NScarcinoma__mixed_adenosquamous_carcinoma [COSU585]
    4q33 Cosmic_SVdel(4)(q33)  Cosmic_SV [COST157708]ovary__NScarcinoma__mixed_adenosquamous_carcinoma [COSU585]
    4q33 Cosmic_SVdel(4)(q33)  Cosmic_SV [COST158352]ovary__NScarcinoma__mixed_adenosquamous_carcinoma [COSU585]
    4q33 Cosmic_SVdel(4)(q33)  Cosmic_SV [COST158363]ovary__NScarcinoma__mixed_adenosquamous_carcinoma [COSU585]
    4q33 Cosmic_SVdel(4)(q33)  Cosmic_SV [COST16290]breast__NScarcinoma__NS[PubMed] 
    4q33 Cosmic_SVdel(4)(q33)  Cosmic_SV [COST187477]pancreas__NScarcinoid-endocrine_tumour__NS [COSU650]
    4q33 Cosmic_SVdel(4)(q33)  Cosmic_SV [COST187477]pancreas__NScarcinoid-endocrine_tumour__NS [COSU661]
    4q33 Cosmic_SVdel(4)(q33)  Cosmic_SV [COST218544]pancreas__NScarcinoma__ductal_carcinoma [COSU382]
    4q33 Cosmic_SVdel(4)(q33)  Cosmic_SV [COST218971]pancreas__NScarcinoma__ductal_carcinoma [COSU382]
    4q33 Cosmic_SVdel(4)(q33)  Cosmic_SV [COST22659]prostate__NScarcinoma__NS[PubMed] 
    4q33 Cosmic_SVdel(4)(q33)  Cosmic_SV [COST442158]liver__NScarcinoma__NS [COSU322]
    4q33 Mitelmandel(4)(q33)  Mitelman (CGAP) Follicular lymphoma  
    4q334q35Cosmic_SVdel(4)(q33q35)  Cosmic_SV [COST218543]pancreas__NScarcinoma__ductal_carcinoma [COSU382]
    4q334q35Cosmic_SVdel(4)(q33q35)  Cosmic_SV [COST473615]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    1q124q33Mitelmander(4)t(1;4)(q12;q33)  Mitelman (CGAP)LiverHepatoblastoma  
    2p234q33Mitelmandic(2;4)(p23;q33)  Mitelman (CGAP) Anaplastic large cell lymphoma, systemic type[PubMed] 
    4q324q33Cosmic_SVdup(4)(q32q33)  Cosmic_SV [COST155127]ovary__NScarcinoma__mixed_adenosquamous_carcinoma [COSU585]
    4q324q33Cosmic_SVdup(4)(q32q33)  Cosmic_SV [COST165932]ovary__NScarcinoma__mixed_adenosquamous_carcinoma [COSU585]
    4q33 Cosmic_SVdup(4)(q33)  Cosmic_SV [COST15991]breast__NScarcinoma__ductal_carcinoma[PubMed] 
    4q33 Cosmic_SVdup(4)(q33)  Cosmic_SV [COST224603]pancreas__NScarcinoma__ductal_carcinoma [COSU382]
    4q33 Cosmic_SVdup(4)(q33)  Cosmic_SV [COST462130]liver__NScarcinoma__NS [COSU322]
    4q334q33Cosmic_SVdup(4)(q33q33)  Cosmic_SV [COST130999]pancreas__NScarcinoma__ductal_carcinoma [COSU328]
    4q334q33Cosmic_SVdup(4)(q33q33)  Cosmic_SV [COST149663]ovary__NScarcinoma__mixed_adenosquamous_carcinoma [COSU585]
    4q33 Cosmic_SVins(4)(q33)  Cosmic_SV [COST188753]prostate__NScarcinoma__adenocarcinoma [COSU538]
    4q33 Cosmic_SVins(4)(q33)  Cosmic_SV [COST191177]prostate__NScarcinoma__adenocarcinoma [COSU538]
    4q33 Cosmic_SVinv(4)(q33)  Cosmic_SV [COST29575]liver__NScarcinoma__hepatocellular_carcinoma[PubMed] 
    4q33 Cosmic_SVinv(4)(q33)  Cosmic_SV [COST372576]pancreas__NScarcinoma__NS [COSU382]
    4q334q34Cosmic_SVinv(4)(q33q34)  Cosmic_SV [COST188233]prostate__NScarcinoma__adenocarcinoma [COSU538]
    4q334q34Cosmic_SVinv(4)(q33q34)  Cosmic_SV [COST188234]prostate__NScarcinoma__adenocarcinoma [COSU538]
    4q334q34Cosmic_SVinv(4)(q33q34)  Cosmic_SV [COST454562]liver__NScarcinoma__NS [COSU322]
    4q334q35Cosmic_SVinv(4)(q33q35)  Cosmic_SV [COST444180]liver__NScarcinoma__NS [COSU322]
    4q334q35Cosmic_SVinv(4)(q33q35)  Cosmic_SV [COST444181]liver__NScarcinoma__NS [COSU322]
    4q334q35Cosmic_SVinv(4)(q33q35)  Cosmic_SV [COST460171]liver__NScarcinoma__NS [COSU322]
    1p324q33dbCRIDt(1;4)(p32;q33)  11565Malignant Fibrous Histiocytomas[PubMed] 
    1q124q33Mitelmant(1;4)(q12;q33)  Mitelman (CGAP)LiverHepatoblastoma  
    4q3310q25Mitelmant(4;10)(q33;q25)CLCN3SMNDC1Mitelman (CGAP)LungAdenocarcinoma[PubMed] 
    4q314q33Mitelmant(4;4)(q31;q33)CLCN3SMAD1Mitelman (CGAP)
    [TCGA]
    BreastAdenocarcinoma[PubMed] 
    4q335q12Mitelmant(4;5)(q33;q12)  Mitelman (CGAP)SkeletonSubungual exostosis  
    1p364q33Cosmic_SVu(1;4)(p36;q33)  Cosmic_SV [COST355632]breast__NScarcinoma__ductal_carcinoma [COSU652]
    1q314q33Cosmic_SVu(1;4)(q31;q33)  Cosmic_SV [COST192877]pancreas__NScarcinoma__ductal_carcinoma [COSU328]
    3q294q33Cosmic_SVu(3;4)(q29;q33)  Cosmic_SV [COST149405]ovary__NScarcinoma__mixed_adenosquamous_carcinoma [COSU585]
    4q3311p15Cosmic_SVu(4;11)(q33;p15)  Cosmic_SV [COST191915]prostate__NScarcinoma__adenocarcinoma [COSU538]
    4q3311q13Cosmic_SVu(4;11)(q33;q13)  Cosmic_SV [COST144399]ovary__NScarcinoma__mixed_adenosquamous_carcinoma [COSU585]
    4q3311q13Cosmic_SVu(4;11)(q33;q13)  Cosmic_SV [COST333193]breast__NScarcinoma__ductal_carcinoma [COSU652]
    4q3314p13Cosmic_SVu(4;14)(q33;p13)  Cosmic_SV [COST450457]liver__NScarcinoma__NS [COSU322]
    4q3314q11Cosmic_SVu(4;14)(q33;q11)  Cosmic_SV [COST167372]central_nervous_system__brainprimitive_neuroectodermal_tumour-medulloblastoma__large_cell [COSU379]
    4q3314q13Cosmic_SVu(4;14)(q33;q13)  Cosmic_SV [COST215328]pancreas__NScarcinoma__ductal_carcinoma [COSU382]
    4q3316q12Cosmic_SVu(4;16)(q33;q12)  Cosmic_SV [COST369705]breast__NScarcinoma__ductal_carcinoma [COSU652]
    4q3316q22Cosmic_SVu(4;16)(q33;q22)  Cosmic_SV [COST348490]breast__NScarcinoma__ductal_carcinoma [COSU652]
    4q3317q25Cosmic_SVu(4;17)(q33;q25)  Cosmic_SV [COST324159]breast__NScarcinoma__ductal_carcinoma [COSU652]
    4q3319p13Cosmic_SVu(4;19)(q33;p13)  Cosmic_SV [COST405242]breast__NScarcinoma__ductal_carcinoma [COSU652]
    4q3320q13Cosmic_SVu(4;20)(q33;q13)  Cosmic_SV [COST343270]breast__NScarcinoma__ductal_carcinoma [COSU652]
    4q333q13Cosmic_SVu(4;3)(q33;q13)  Cosmic_SV [COST186404]pancreas__NScarcinoid-endocrine_tumour__NS [COSU650]
    4q333q13Cosmic_SVu(4;3)(q33;q13)  Cosmic_SV [COST186404]pancreas__NScarcinoid-endocrine_tumour__NS [COSU661]
    4q335q34Cosmic_SVu(4;5)(q33;q34)  Cosmic_SV [COST348497]breast__NScarcinoma__ductal_carcinoma [COSU652]
    4q336p24Cosmic_SVu(4;6)(q33;p24)  Cosmic_SV [COST187073]pancreas__NScarcinoid-endocrine_tumour__NS [COSU650]
    4q336p24Cosmic_SVu(4;6)(q33;p24)  Cosmic_SV [COST187073]pancreas__NScarcinoid-endocrine_tumour__NS [COSU661]
    4q337q34Cosmic_SVu(4;7)(q33;q34)  Cosmic_SV [COST147594]ovary__NScarcinoma__mixed_adenosquamous_carcinoma [COSU585]
    4q338q12Cosmic_SVu(4;8)(q33;q12)  Cosmic_SV [COST138628]ovary__NScarcinoma__mixed_adenosquamous_carcinoma [COSU585]
    4q338q22Cosmic_SVu(4;8)(q33;q22)  Cosmic_SV [COST462419]liver__NScarcinoma__NS [COSU322]
    4q339q21Cosmic_SVu(4;9)(q33;q21)  Cosmic_SV [COST116670]pancreas__NScarcinoma__ductal_carcinoma [COSU328]
    4q339q31Cosmic_SVu(4;9)(q33;q31)  Cosmic_SV [COST187421]pancreas__NScarcinoid-endocrine_tumour__NS [COSU650]
    4q339q31Cosmic_SVu(4;9)(q33;q31)  Cosmic_SV [COST187421]pancreas__NScarcinoid-endocrine_tumour__NS [COSU661]
    4q284q33Cosmic_SVu(4)(q28;q33)  Cosmic_SV [COST379993]breast__NScarcinoma__ductal_carcinoma [COSU652]
    4q324q33Cosmic_SVu(4)(q32;q33)  Cosmic_SV [COST167292]central_nervous_system__brainprimitive_neuroectodermal_tumour-medulloblastoma__large_cell [COSU379]
    4q324q33Cosmic_SVu(4)(q32;q33)  Cosmic_SV [COST327589]breast__NScarcinoma__ductal_carcinoma [COSU652]
    4q324q33Cosmic_SVu(4)(q32;q33)  Cosmic_SV [COST375150]breast__NScarcinoma__ductal_carcinoma [COSU652]
    4q324q33Cosmic_SVu(4)(q32;q33)  Cosmic_SV [COST382748]breast__NScarcinoma__ductal_carcinoma [COSU652]
    4q334p16Cosmic_SVu(4)(q33;p16)  Cosmic_SV [COST317519]breast__NScarcinoma__ductal_carcinoma [COSU652]
    4q334p16Cosmic_SVu(4)(q33;p16)  Cosmic_SV [COST331147]breast__NScarcinoma__lobular_carcinoma [COSU652]
    4q334p16Cosmic_SVu(4)(q33;p16)  Cosmic_SV [COST447260]breast__NScarcinoma__HER-positive_carcinoma [COSU668]
    4q334q33Cosmic_SVu(4)(q33;q33)  Cosmic_SV [COST321506]breast__NScarcinoma__ductal_carcinoma [COSU652]
    4q334q33Cosmic_SVu(4)(q33;q33)  Cosmic_SV [COST324214]breast__NScarcinoma__ductal_carcinoma [COSU652]
    4q334q33Cosmic_SVu(4)(q33;q33)  Cosmic_SV [COST332519]breast__NScarcinoma__ductal_carcinoma [COSU652]
    4q334q33Cosmic_SVu(4)(q33;q33)  Cosmic_SV [COST344038]breast__NScarcinoma__ductal_carcinoma [COSU652]
    4q334q33Cosmic_SVu(4)(q33;q33)  Cosmic_SV [COST348541]breast__NScarcinoma__ductal_carcinoma [COSU652]
    4q334q33Cosmic_SVu(4)(q33;q33)  Cosmic_SV [COST353498]breast__NScarcinoma__ductal_carcinoma [COSU652]
    4q334q33Cosmic_SVu(4)(q33;q33)  Cosmic_SV [COST360495]breast__NScarcinoma__ductal_carcinoma [COSU652]
    4q334q33Cosmic_SVu(4)(q33;q33)  Cosmic_SV [COST381016]breast__NScarcinoma__ductal_carcinoma [COSU652]
    4q334q34Cosmic_SVu(4)(q33;q34)  Cosmic_SV [COST401592]breast__NScarcinoma__ductal_carcinoma [COSU652]
    4q334q34Cosmic_SVu(4)(q33;q34)  Cosmic_SV [COST451958]breast__NScarcinoma__HER-positive_carcinoma [COSU668]
    4q334q34Cosmic_SVu(4)(q33;q34)  Cosmic_SV [COST467774]breast__NScarcinoma__HER-positive_carcinoma [COSU668]
    4q334q34Cosmic_SVu(4)(q33;q34)  Cosmic_SV [COST469720]breast__NScarcinoma__HER-positive_carcinoma [COSU668]
    4q334q35Cosmic_SVu(4)(q33;q35)  Cosmic_SV [COST349681]breast__NScarcinoma__ductal_carcinoma [COSU652]
    4q334q35Cosmic_SVu(4)(q33;q35)  Cosmic_SV [COST365773]breast__NScarcinoma__ER-HER-positive_carcinoma [COSU652]
    4q334q35Cosmic_SVu(4)(q33;q35)  Cosmic_SV [COST376017]breast__NScarcinoma__ductal_carcinoma [COSU652]
    4q334q35Cosmic_SVu(4)(q33;q35)  Cosmic_SV [COST443807]breast__NScarcinoma__HER-positive_carcinoma [COSU668]
    4q33Xp22Cosmic_SVu(4;X)(q33;p22)  Cosmic_SV [COST141070]ovary__NScarcinoma__mixed_adenosquamous_carcinoma [COSU585]
    4q33Xp22Cosmic_SVu(4;X)(q33;p22)  Cosmic_SV [COST145240]ovary__NScarcinoma__mixed_adenosquamous_carcinoma [COSU585]
    4q33Xq24Cosmic_SVu(4;X)(q33;q24)  Cosmic_SV [COST152420]ovary__NScarcinoma__mixed_adenosquamous_carcinoma [COSU585]

    Genes in band 4q33

    (click on headers to reorder columns)
    GoldenPath hg38Band 1Band 2ClassCloneFusionPartner 1Partner 2LinksTopographyMorphologyPubmedOmimAccession
    chr4:169393270-169612627 - 4q33 3p14 Gene [CT]   NEK1/APPL1 NEK1 APPL1 [Cosmic]
    [ChiTaRS]  
        [Omim] [GenBank]
    chr4:169393270-169612627 - 4q33 6q22 Gene [CT]   NKAIN2/NEK1 NEK1 NKAIN2 [Cosmic]
    [ChiTaRS]  
        [Omim] [GenBank]
    chr4:169393270-169612627 - 4q33 1q32 Gene [CT]   NEK1/RPS6KC1 NEK1 RPS6KC1 [Cosmic]
    [ChiTaRS]  
        [Omim] [GenBank]
    chr4:169393270-169612627 - 4q33 1q32 Gene [CT]   NEK1/RPS6KC1 NEK1 RPS6KC1 [Cosmic]
    [ChiTaRS]  
        [Omim] [GenBank]
    chr4:169393270-169612627 - 4q33   Gene [G]     NEK1   [Cosmic]     [Omim] [Entrez]
    chr4:169620521-169723187 + 4q33 7p21 Gene [AM]   BZW2/CLCN3 CLCN3 BZW2 [Cosmic]
    [TCGA-BRCA]     [Omim] [Entrez]
    chr4:169620521-169723187 + 4q33 2q35 Gene [CT]   CLCN3/ASIC4 CLCN3 ASIC4 [Cosmic]
    [ChiTaRS]  
        [Omim] [GenBank]
    chr4:169620521-169723187 + 4q33 4q33 Gene [CT]   CLCN3/CLCN3 CLCN3 CLCN3 [Cosmic]
    [ChiTaRS]  
        [Omim] [GenBank]
    chr4:169620521-169723187 + 4q33 4q33 Gene [CT]   CLCN3/CLCN3 CLCN3 CLCN3 [Cosmic]
    [ChiTaRS]  
        [Omim] [GenBank]
    chr4:169620521-169723187 + 4q33 16q22 Gene [CT]   CLCN3/NFATC3 CLCN3 NFATC3 [Cosmic]
    [ChiTaRS]  
        [Omim] [GenBank]
    chr4:169620521-169723187 + 4q33 10q25 Gene [CT]   CLCN3/SMNDC1 CLCN3 SMNDC1 [Cosmic]
    [ChiTaRS]  
        [Omim] [GenBank]
    chr4:169620521-169723187 + 4q33   Gene [G]     CLCN3   [Cosmic]     [Omim] [Entrez]
    chr4:169620521-169723187 + 4q33 4q31 Gene [M]   CLCN3/SMAD1 CLCN3 SMAD1 [Cosmic]
    [Mitelman]
    Breast Adenocarcinoma [PubMed] [Omim] [Entrez]
    chr4:169620521-169723187 + 4q33 10q25 Gene [M]   CLCN3/SMNDC1 CLCN3 SMNDC1 [Cosmic]
    [Mitelman]
    Lung Adenocarcinoma [PubMed] [Omim] [Entrez]
    chr4:169620521-169723187 + 4q33 4q31 Gene [TF]   CLCN3/SMAD1 CLCN3 SMAD1 [Cosmic]
    [TCGA]
    [TCGA-BRCA]   [PubMed] [Omim] [Entrez]
    chr4:169620521-169723187 + 4q33 4q24 Gene [TF]   CLCN3/UBE2D3 CLCN3 UBE2D3 [Cosmic]
    [TCGA]
    [TCGA-BRCA]   [PubMed] [Omim] [Entrez]
    chr4:169729468-169757942 - 4q33   Gene [G]     HPF1       [Omim] [Entrez]
    chr4:169917761-169975902 - 4q33   Gene [E]     LINC02275       [Omim] [Entrez]
    chr4:169986597-170003792 - 4q33 4q33 Gene [CT]   MFAP3L/AADAT MFAP3L AADAT [Cosmic]
    [ChiTaRS]  
        [Omim] [GenBank]
    chr4:169986597-170003792 - 4q33 4q33 Gene [CT]   MFAP3L/MFAP3L MFAP3L MFAP3L [Cosmic]
    [ChiTaRS]  
        [Omim] [GenBank]
    chr4:169986597-170003792 - 4q33 4q33 Gene [CT]   MFAP3L/MFAP3L MFAP3L MFAP3L [Cosmic]
    [ChiTaRS]  
        [Omim] [GenBank]
    chr4:169986597-170003792 - 4q33   Gene [G]     MFAP3L   [Cosmic]     [Omim] [Entrez]
    chr4:170060222-170090221 - 4q33 4q33 Gene [CT]   MFAP3L/AADAT AADAT MFAP3L [Cosmic]
    [ChiTaRS]  
        [Omim] [GenBank]
    chr4:170060222-170090221 - 4q33   Gene [G]     AADAT   [Cosmic]     [Omim] [Entrez]
    chr4:170226591-170283722 + 4q33   Gene [G]     LINC01612       [Omim] [Entrez]
    chr4:170581470-170604984 - 4q33   Gene [G]     HSP90AA6P       [Omim] [Entrez]
    chr4:170742469-170743735 - 4q33   Gene [E]     LINC02382       [Omim] [Entrez]

    [ Bold normal : A; Italic normal :G; Italic small : E ]

    X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22
    [previous]   4 4p 4q 4p16 4p15 4p14 4p13 4p12 4p11 4q11 4q12 4q13 4q21 4q22 4q23 4q24 4q25 4q26 4q27 4q28 4q31 4q32 4q33 4q34 4q35   [next]

    External links

    Mitelman Database [NCI] : Breakpoint 4q33

    [ UCSC ][ enSembl ][ MapView - NCBI ][ 1000Genomes ][ EVS ][ CGWB ][ DGV ][ DBVar ][ OMIM ][ HapMap ][ DECIPHER ] [ ECARUCA ]

    Gene Expression (MSigDB) in 4q33  [ HTC ]  [ NCI ]  [ INV ]

    References

    Contributor(s)

    Writtenmay 2012Philippe Dessen
      
    Updatedjuin 2017Philippe Dessen and Jean-Loup Huret

    Citation

    This paper should be referenced as such :
    Dessen P and Huret JL. Chromosomal band 4q33. Atlas Genet Cytogenet Oncol Haematol. July 2012.
    URL : http://atlasgeneticsoncology.org/Bands/4q33.html
    © Atlas of Genetics and Cytogenetics in Oncology and Haematology
    indexed on : mer. juin 7 12:23:30 CEST 2017


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