Chromosome 5

Atlas of Genetics and Cytogenetics in Oncology and Haematology


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X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

ENTITIES: by Chromosome band

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22

Chromosome 5


[previous]   5 5p 5q 5p15 5p14 5p13 5p12 5p11 5q11 5q12 5q13 5q14 5q15 5q21 5q22 5q23 5q31 5q32 5q33 5q34 5q35   [next]

Band 5p11

chr5:46100000-48800000 (2700 Kb)

  • Chromosomal abnormalities in band 5p11
  • Genes in band 5p11 (reference hg38)
  • External links
  • References

    Chromosomal abnormalities in band 5p11

    (click on headers to reorder columns)
    Band 1Band 2ClassEntityPartner 1Partner 2LinksTopographyMorphology[PubMed][Study]
    5p11 Cosmic_SVdel(5)(p11)  Cosmic_SV [COST115612]pancreas__NScarcinoma__ductal_carcinoma[PubMed] 
    5p11 Cosmic_SVdel(5)(p11)  Cosmic_SV [COST117638]pancreas__NScarcinoma__ductal_carcinoma[PubMed] 
    5p11 Cosmic_SVdel(5)(p11)  Cosmic_SV [COST121632]pancreas__NScarcinoma__ductal_carcinoma[PubMed] 
    5p11 Cosmic_SVdel(5)(p11)  Cosmic_SV [COST123945]pancreas__NScarcinoma__ductal_carcinoma[PubMed] 
    5p11 Cosmic_SVdel(5)(p11)  Cosmic_SV [COST127220]pancreas__NScarcinoma__ductal_carcinoma[PubMed] 
    5p11 Cosmic_SVdel(5)(p11)  Cosmic_SV [COST129774]pancreas__NScarcinoma__ductal_carcinoma[PubMed] 
    5p11 Cosmic_SVdel(5)(p11)  Cosmic_SV [COST133687]pancreas__NScarcinoma__ductal_carcinoma[PubMed] 
    5p11 Cosmic_SVdel(5)(p11)  Cosmic_SV [COST136205]ovary__NScarcinoma__mixed_adenosquamous_carcinoma[PubMed] 
    5p11 Cosmic_SVdel(5)(p11)  Cosmic_SV [COST137970]ovary__NScarcinoma__mixed_adenosquamous_carcinoma[PubMed] 
    5p11 Cosmic_SVdel(5)(p11)  Cosmic_SV [COST139592]ovary__NScarcinoma__mixed_adenosquamous_carcinoma[PubMed] 
    5p11 Cosmic_SVdel(5)(p11)  Cosmic_SV [COST161414]ovary__NScarcinoma__mixed_adenosquamous_carcinoma[PubMed] 
    5p11 Cosmic_SVdel(5)(p11)  Cosmic_SV [COST27843]large_intestine__NScarcinoma__adenocarcinoma  
    5p11 Mitelmandel(5)(p11)  Mitelman (CGAP) Acute lymphoblastic leukemia/lymphoblastic lymphoma  
    5p11 Mitelmandel(5)(p11)  Mitelman (CGAP)BreastAdenocarcinoma  
    5p11 Mitelmandel(5)(p11)  Mitelman (CGAP)KidneyAdenocarcinoma  
    5p11 Mitelmandel(5)(p11)  Mitelman (CGAP) Mature B-cell neoplasm, NOS  
    5p11 Mitelmandel(5)(p11)  Mitelman (CGAP)Oral cavitySquamous cell carcinoma  
    5p11 Mitelmandel(5)(p11)  Mitelman (CGAP)Soft tissueLeiomyosarcoma  
    5p115q32Cosmic_SVdel(5)(p11q32)  Cosmic_SV [COST197307]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    5p115q35Cosmic_SVdel(5)(p11q35)  Cosmic_SV [COST519446]lung__NScarcinoma__adenocarcinoma  
    5p135p11Cosmic_SVdel(5)(p13p11)  Cosmic_SV [COST185071]skin__NScarcinoma__NS[PubMed] 
    5p1115p11Mitelmander(15)t(5;15)(p11;p11)  Mitelman (CGAP) Mantle cell lymphoma  
    5p1117p11Mitelmander(17)t(5;17)(p11;p11)  Mitelman (CGAP) Acute myeloblastic leukemia with maturation (FAB type M2)  
    5p1117p11Mitelmander(17)t(5;17)(p11;p11)  Mitelman (CGAP) Acute myeloid leukemia, NOS  
    5p1117p11Mitelmander(17)t(5;17)(p11;p11)  Mitelman (CGAP) Refractory anemia with excess of blasts (FAB)  
    5p1113q14Mitelmander(5)t(5;13)(p11;q14)  Mitelman (CGAP)SkeletonOsteosarcoma, NOS  
    5p11 Cosmic_SVdup(5)(p11)  Cosmic_SV [COST196842]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    5p115p11Cosmic_SVdup(5)(p11p11)  Cosmic_SV [COST119157]pancreas__NScarcinoma__ductal_carcinoma[PubMed] 
    5p115p11Cosmic_SVdup(5)(p11p11)  Cosmic_SV [COST159576]ovary__NScarcinoma__mixed_adenosquamous_carcinoma[PubMed] 
    5p115p11Cosmic_SVdup(5)(p11p11)  Cosmic_SV [COST193851]pancreas__NScarcinoma__ductal_carcinoma[PubMed] 
    5p115p11Cosmic_SVinv(5)(p11p11)  Cosmic_SV [COST148211]ovary__NScarcinoma__mixed_adenosquamous_carcinoma[PubMed] 
    5p125p12Cosmic_SVinv(5)(p12p12)  Cosmic_SV [COST156435]ovary__NScarcinoma__mixed_adenosquamous_carcinoma[PubMed] 
    1p215p11dbCRIDt(1;5)(p21;p11)  11072Myeloid Hematological Malignancies[PubMed] 
    5p1113q14Mitelmant(5;13)(p11;q14)  Mitelman (CGAP)SkeletonOsteosarcoma, NOS  
    5p1115p11Mitelmant(5;15)(p11;p11)  Mitelman (CGAP) Mantle cell lymphoma  
    5p1117p11Mitelmant(5;17)(p11;p11)  Mitelman (CGAP) Acute myeloblastic leukemia with maturation (FAB type M2)  
    5p1117p11Mitelmant(5;17)(p11;p11)  Mitelman (CGAP) Acute myeloid leukemia, NOS  
    5p1117p11Mitelmant(5;17)(p11;p11)  Mitelman (CGAP) Refractory anemia with excess of blasts (FAB)  
    5p1117q11Atlas - Leukemiat(5;17)(p11;q11)  t0517p11q11ID1772AML[Biblio] 
    1p315p11Cosmic_SVu(1;5)(p31;p11)  Cosmic_SV [COST124777]pancreas__NScarcinoma__ductal_carcinoma[PubMed] 
    1q415p11Cosmic_SVu(1;5)(q41;p11)  Cosmic_SV [COST451101]breast__NScarcinoma__HER-positive_carcinoma[PubMed] 
    18p115p11Cosmic_SVu(18;5)(p11;p11)  Cosmic_SV [COST137931]ovary__NScarcinoma__mixed_adenosquamous_carcinoma[PubMed] 
    20p115p11Cosmic_SVu(20;5)(p11;p11)  Cosmic_SV [COST167422]central_nervous_system__brainprimitive_neuroectodermal_tumour-medulloblastoma__large_cell[PubMed] 
    5p1110q22Cosmic_SVu(5;10)(p11;q22)  Cosmic_SV [COST445844]breast__NScarcinoma__HER-positive_carcinoma[PubMed] 
    5p1111q24Cosmic_SVu(5;11)(p11;q24)  Cosmic_SV [COST162632]ovary__NScarcinoma__mixed_adenosquamous_carcinoma[PubMed] 
    5p1117p13Cosmic_SVu(5;17)(p11;p13)  Cosmic_SV [COST327863]breast__NScarcinoma__ductal_carcinoma[PubMed] 
    5p113q21Cosmic_SVu(5;3)(p11;q21)  Cosmic_SV [COST185820]skin__NScarcinoma__NS[PubMed] 
    5p116p25Cosmic_SVu(5;6)(p11;p25)  Cosmic_SV [COST136780]ovary__NScarcinoma__mixed_adenosquamous_carcinoma[PubMed] 
    5p116p25Cosmic_SVu(5;6)(p11;p25)  Cosmic_SV [COST449315]breast__NScarcinoma__HER-positive_carcinoma[PubMed] 
    5p116q11Cosmic_SVu(5;6)(p11;q11)  Cosmic_SV [COST441842]breast__NScarcinoma__HER-positive_carcinoma[PubMed] 
    5p116q24Cosmic_SVu(5;6)(p11;q24)  Cosmic_SV [COST447353]breast__NScarcinoma__HER-positive_carcinoma[PubMed] 
    5p119p21Cosmic_SVu(5;9)(p11;p21)  Cosmic_SV [COST137585]ovary__NScarcinoma__mixed_adenosquamous_carcinoma[PubMed] 
    5p119p24Cosmic_SVu(5;9)(p11;p24)  Cosmic_SV [COST465607]breast__NScarcinoma__HER-positive_carcinoma[PubMed] 
      Cosmic_SVu(5;)(p11;)  Cosmic_SV [COST518142]lung__NScarcinoma__adenocarcinoma  
    5p115p11Cosmic_SVu(5)(p11;p11)  Cosmic_SV [COST113520]haematopoietic_and_lymphoid_tissue__NSlymphoid_neoplasm__NS[PubMed] 
    5p115p11Cosmic_SVu(5)(p11;p11)  Cosmic_SV [COST114096]haematopoietic_and_lymphoid_tissue__NSlymphoid_neoplasm__NS[PubMed] 
    5p115p11Cosmic_SVu(5)(p11;p11)  Cosmic_SV [COST114201]haematopoietic_and_lymphoid_tissue__NSlymphoid_neoplasm__NS[PubMed] 
    5p115p11Cosmic_SVu(5)(p11;p11)  Cosmic_SV [COST194589]bone__NSEwings_sarcoma-peripheral_primitive_neuroectodermal_tumour__NS[PubMed] 
    5p115p11Cosmic_SVu(5)(p11;p11)  Cosmic_SV [COST453466]breast__NScarcinoma__HER-positive_carcinoma[PubMed] 
    5p115p11Cosmic_SVu(5)(p11;p11)  Cosmic_SV [COST461337]breast__NScarcinoma__HER-positive_carcinoma[PubMed] 
    5p115p11Cosmic_SVu(5)(p11;p11)  Cosmic_SV [COST492243]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    5p115p11Cosmic_SVu(5)(p11;p11)  Cosmic_SV [COST554103]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    5p115p11Cosmic_SVu(5)(p11;p11)  Cosmic_SV [COST558733]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    5p115p11Cosmic_SVu(5)(p11;p11)  Cosmic_SV [COST559073]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    5p115p11Cosmic_SVu(5)(p11;p11)  Cosmic_SV [COST560000]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    5p115p11Cosmic_SVu(5)(p11;p11)  Cosmic_SV [COST561276]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    5p115p11Cosmic_SVu(5)(p11;p11)  Cosmic_SV [COST571639]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    5p115p11Cosmic_SVu(5)(p11;p11)  Cosmic_SV [COST578269]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    5p115p11Cosmic_SVu(5)(p11;p11)  Cosmic_SV [COST579040]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    5p115p11Cosmic_SVu(5)(p11;p11)  Cosmic_SV [COST581554]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    5p115p11Cosmic_SVu(5)(p11;p11)  Cosmic_SV [COST581696]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    5p115p11Cosmic_SVu(5)(p11;p11)  Cosmic_SV [COST721789]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    5p115p11Cosmic_SVu(5)(p11;p11)  Cosmic_SV [COST722975]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    5p115p11Cosmic_SVu(5)(p11;p11)  Cosmic_SV [COST723701]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    5p115p11Cosmic_SVu(5)(p11;p11)  Cosmic_SV [COST725514]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    5p115p11Cosmic_SVu(5)(p11;p11)  Cosmic_SV [COST732316]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    5p115p11Cosmic_SVu(5)(p11;p11)  Cosmic_SV [COST736821]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    5p115p11Cosmic_SVu(5)(p11;p11)  Cosmic_SV [COST741185]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    5p115p11Cosmic_SVu(5)(p11;p11)  Cosmic_SV [COST742731]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    5p115p11Cosmic_SVu(5)(p11;p11)  Cosmic_SV [COST742740]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    5p115p11Cosmic_SVu(5)(p11;p11)  Cosmic_SV [COST757621]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    5p115p11Cosmic_SVu(5)(p11;p11)  Cosmic_SV [COST760787]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    5p115p11Cosmic_SVu(5)(p11;p11)  Cosmic_SV [COST766150]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    5p115p15Cosmic_SVu(5)(p11;p15)  Cosmic_SV [COST739132]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    5p115p15Cosmic_SVu(5)(p11;p15)  Cosmic_SV [COST757673]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    5p115q21Cosmic_SVu(5)(p11;q21)  Cosmic_SV [COST568314]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    5p115q21Cosmic_SVu(5)(p11;q21)  Cosmic_SV [COST727262]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    5p115q33Cosmic_SVu(5)(p11;q33)  Cosmic_SV [COST494736]endometrium__NScarcinoma__carcinosarcoma-malignant_mesodermal_mixed_tumour[PubMed] 
    5p125p11Cosmic_SVu(5)(p12;p11)  Cosmic_SV [COST461774]breast__NScarcinoma__HER-positive_carcinoma[PubMed] 
    5p155p11Cosmic_SVu(5)(p15;p11)  Cosmic_SV [COST327845]breast__NScarcinoma__ductal_carcinoma[PubMed] 
    5p155p11Cosmic_SVu(5)(p15;p11)  Cosmic_SV [COST749838]prostate__NScarcinoma__adenocarcinoma[PubMed] 
    6p255p11Cosmic_SVu(6;5)(p25;p11)  Cosmic_SV [COST153477]ovary__NScarcinoma__mixed_adenosquamous_carcinoma[PubMed] 
    7p215p11Cosmic_SVu(7;5)(p21;p11)  Cosmic_SV [COST185559]skin__NScarcinoma__NS[PubMed] 

    Genes in band 5p11

    (click on headers to reorder columns)
    GoldenPath hg38Band 1Band 2ClassCloneFusionPartner 1Partner 2LinksTopographyMorphologyPubmedOmimAccession

    [ Bold normal : A; Italic normal :G; Italic small : E ]

    X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22
    [previous]   5 5p 5q 5p15 5p14 5p13 5p12 5p11 5q11 5q12 5q13 5q14 5q15 5q21 5q22 5q23 5q31 5q32 5q33 5q34 5q35   [next]

    External links

    Mitelman Database [NCI] : Breakpoint 5p11

    [ UCSC ][ enSembl ][ MapView - NCBI ][ 1000Genomes ][ EVS ][ CGWB ][ DGV ][ DBVar ][ OMIM ][ HapMap ][ DECIPHER ] [ ECARUCA ]
    Gene Expression (MSigDB) in 5p11  [ HTC ]  [ NCI ]  [ INV ]

    Global tables

  • Anomalies list (tabulated txt file)
  • Gene list (tabulated txt file)
  • list of gene fusions for each gene (with origins of the data)
  • list of gene fusions by origin (with topography and morphology)

    References

    Contributor(s)

    Writtenmay 2012Philippe Dessen
      
    Updatedaoût 2018Philippe Dessen and Jean-Loup Huret

    Citation

    This paper should be referenced as such :
    Dessen P and Huret JL. Chromosomal band 5p11. Atlas Genet Cytogenet Oncol Haematol. July 2012.
    URL : http://atlasgeneticsoncology.org/Bands/5p11.html
    © Atlas of Genetics and Cytogenetics in Oncology and Haematology
    indexed on : jeu. août 16 10:00:26 CEST 2018


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