Chromosome 9

Atlas of Genetics and Cytogenetics in Oncology and Haematology


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ENTITIES: by Chromosome band

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22

Chromosome 9


[previous]   9 9p 9q 9p24 9p23 9p22 9p21 9p13 9p12 9p11 9q11 9q12 9q13 9q21 9q22 9q31 9q32 9q33 9q34   [next]

Band 9p11

chr9:40000000-43000000 (3000 Kb)

  • Chromosomal abnormalities in band 9p11
  • Genes in band 9p11 (reference hg38)
  • External links
  • References

    Chromosomal abnormalities in band 9p11

    (click on headers to reorder columns)
    Band 1Band 2ClassEntityPartner 1Partner 2LinksTopographyMorphology[PubMed][Study]
      Mitelmandel(9)(p11)  Mitelman (CGAP) Acute lymphoblastic leukemia/lymphoblastic lymphoma  
      Mitelmandel(9)(p11)  Mitelman (CGAP) Acute myeloblastic leukemia without maturation (FAB type M1)  
      Mitelmandel(9)(p11)  Mitelman (CGAP) Acute myelomonocytic leukemia (FAB type M4)  
      Mitelmandel(9)(p11)  Mitelman (CGAP)BrainAstrocytoma, grade III-IV/Glioblastoma  
      Mitelmandel(9)(p11)  Mitelman (CGAP) Diffuse large B-cell lymphoma  
      Mitelmandel(9)(p11)  Mitelman (CGAP)KidneyAdenocarcinoma  
      Mitelmandel(9)(p11)  Mitelman (CGAP)LungAdenocarcinoma  
      Mitelmandel(9)(p11)  Mitelman (CGAP) Multiple myeloma  
      Mitelmandel(9)(p11)  Mitelman (CGAP)SkinMalignant melanoma  
      Mitelmandel(9)(p11)  Mitelman (CGAP)Soft tissueMalignant peripheral nerve sheath tumor/Triton  
      Mitelmandel(9)(p11p13)  Mitelman (CGAP) Acute lymphoblastic leukemia/lymphoblastic lymphoma  
      Mitelmandel(9)(p11p21)  Mitelman (CGAP) Acute lymphoblastic leukemia/lymphoblastic lymphoma  
      Mitelmandel(9)(p11p22)  Mitelman (CGAP) Acute lymphoblastic leukemia/lymphoblastic lymphoma  
    9p119q12Cosmic_SVdel(9)(p11q12)  Cosmic_SV [COST518767]lung__NScarcinoma__adenocarcinoma  
      Mitelmander(12)t(9;12)(p11;p12)  Mitelman (CGAP) Acute lymphoblastic leukemia/lymphoblastic lymphoma  
      Mitelmander(9)del(9)(p11)del(9)(q12)  Mitelman (CGAP)Uterus, corpusEndometrial stromal sarcoma  
      Mitelmander(9)del(9)(p11)del(9)(q22)  Mitelman (CGAP)SkinMalignant melanoma  
      Mitelmander(9)t(1;9)(q11;p11)  Mitelman (CGAP) Acute lymphoblastic leukemia/lymphoblastic lymphoma  
      Mitelmander(9)t(7;9)(q11;p11)  Mitelman (CGAP) Acute lymphoblastic leukemia/lymphoblastic lymphoma  
      Mitelmander(9)t(9;12)(p11;q21)  Mitelman (CGAP) Acute lymphoblastic leukemia/lymphoblastic lymphoma  
      Mitelmandic(7;9)(p11;p11)  Mitelman (CGAP) Acute lymphoblastic leukemia/lymphoblastic lymphoma  
      Mitelmandic(7;9)(p13;p11)  Mitelman (CGAP) Acute lymphoblastic leukemia/lymphoblastic lymphoma  
      Mitelmandic(9;12)(p11;p11)  Mitelman (CGAP) Acute lymphoblastic leukemia/lymphoblastic lymphoma  
      Mitelmandic(9;12)(p11;p12)  Mitelman (CGAP) Acute lymphoblastic leukemia/lymphoblastic lymphoma  
      Mitelmandic(9;15)(p11;p11)  Mitelman (CGAP) Acute lymphoblastic leukemia/lymphoblastic lymphoma  
      Mitelmandic(9;17)(p11;p11)  Mitelman (CGAP) Acute lymphoblastic leukemia/lymphoblastic lymphoma  
      Mitelmandic(9;20)(p11;p11)  Mitelman (CGAP) Acute lymphoblastic leukemia/lymphoblastic lymphoma  
      Mitelmandic(9;20)(p11;q11)  Mitelman (CGAP) Acute lymphoblastic leukemia/lymphoblastic lymphoma  
      Mitelmandic(9;22)(p11;p11)  Mitelman (CGAP) Acute lymphoblastic leukemia/lymphoblastic lymphoma  
    9p11 Cosmic_SVdup(9)(p11)  Cosmic_SV [COST220243]pancreas__NScarcinoma__ductal_carcinoma [COSU382]
    9p119p13dbCRIDdup(9)(p11.2p13.1) 10261[PubMed] 
    9p119p13dbCRIDdup(9)(p11.2p13.1) 10262[PubMed] 
    9p119p13dbCRIDdup(9)(p11.2p13.1) 10263Reproductive Failure[PubMed] 
    9p11 Cosmic_SVdup(9)(p11)  Cosmic_SV [COST361656]pancreas__NScarcinoma__ductal_carcinoma [COSU382]
    9p11 Cosmic_SVdup(9)(p11)  Cosmic_SV [COST406726]pancreas__NScarcinoma__ductal_carcinoma [COSU382]
    9p119p11Cosmic_SVdup(9)(p11p11)  Cosmic_SV [COST146954]ovary__NScarcinoma__mixed_adenosquamous_carcinoma [COSU585]
    9p119q12Cosmic_SVdup(9)(p11q12)  Cosmic_SV [COST114847]ovary__NScarcinoma__mixed_adenosquamous_carcinoma [COSU585]
    9p119q12Cosmic_SVdup(9)(p11q12)  Cosmic_SV [COST114847]pancreas__NScarcinoid-endocrine_tumour__NS [COSU586]
    9p119q12Cosmic_SVdup(9)(p11q12)  Cosmic_SV [COST114847]pancreas__NScarcinoma__ductal_carcinoma [COSU328]
      Mitelmanidic(9)(p11)  Mitelman (CGAP) Acute lymphoblastic leukemia/lymphoblastic lymphoma  
      Mitelmaninv(9)(p11q12)  Mitelman (CGAP) Chronic myeloid leukemia, t(9;22)  
    9p119q13dbCRIDinv(9)(p11q13) 10012Psoriasis[PubMed] 
    9p119q13dbCRIDinv(9)(p11q13) 10653Isolated Growth Hormone Deficiency[PubMed] 
      Mitelmaninv(9)(p11q13)  Mitelman (CGAP) Acute lymphoblastic leukemia/lymphoblastic lymphoma  
      Mitelmaninv(9)(p11q13)  Mitelman (CGAP) Acute myeloblastic leukemia with maturation (FAB type M2)  
      Mitelmaninv(9)(p11q13)  Mitelman (CGAP) Acute myeloid leukemia, NOS  
      Mitelmaninv(9)(p11q13)  Mitelman (CGAP) Acute myelomonocytic leukemia (FAB type M4)  
      Mitelmaninv(9)(p11q13)  Mitelman (CGAP) Chronic lymphocytic leukemia  
      Mitelmaninv(9)(p11q13)  Mitelman (CGAP) Chronic myelomonocytic leukemia  
      Mitelmaninv(9)(p11q13)  Mitelman (CGAP)LungSquamous cell carcinoma  
      Mitelmaninv(9)(p11q13)  Mitelman (CGAP) Mature B-cell neoplasm, NOS  
      Mitelmaninv(9)(p11q13)  Mitelman (CGAP) Multiple myeloma  
      Mitelmaninv(9)(p11q13)  Mitelman (CGAP) Nonneoplastic hematologic disorder/lesion  
    9p139p13Cosmic_SVinv(9)(p13p13)  Cosmic_SV [COST187252]pancreas__NScarcinoid-endocrine_tumour__NS [COSU650]
    9p139p13Cosmic_SVinv(9)(p13p13)  Cosmic_SV [COST187252]pancreas__NScarcinoid-endocrine_tumour__NS [COSU661]
    1p119p11dbCRIDt(1;9)(p11;p11) 10433Multiple Myeloma[PubMed] 
      Mitelmant(1;9)(q11;p11)  Mitelman (CGAP) Acute lymphoblastic leukemia/lymphoblastic lymphoma  
      Mitelmant(7;9)(q11;p11)  Mitelman (CGAP) Acute lymphoblastic leukemia/lymphoblastic lymphoma  
    9p1110p12Atlas - Leukemiat(9;10)(p11;p12) MLLT10/CNTNAP3BMLLT10CNTNAP3BTL_t0910p11p12ID2964MPD[Biblio] 
      Mitelmant(9;12)(p11;p12)  Mitelman (CGAP) Acute lymphoblastic leukemia/lymphoblastic lymphoma  
      Mitelmant(9;12)(p11;p13)  Mitelman (CGAP) Acute lymphoblastic leukemia/lymphoblastic lymphoma  
      Mitelmant(9;12)(p11;q21)  Mitelman (CGAP) Acute lymphoblastic leukemia/lymphoblastic lymphoma  
      Mitelmant(9;15)(p11;q11)  Mitelman (CGAP)KidneyAdenocarcinoma  
      Mitelmant(9;9)(p11;q11)  Mitelman (CGAP) Acute lymphoblastic leukemia/lymphoblastic lymphoma  
    11q229p11Cosmic_SVu(11;9)(q22;p11)  Cosmic_SV [COST734099]prostate__NScarcinoma__adenocarcinoma [COSU537]
    21p119p11Cosmic_SVu(21;9)(p11;p11)  Cosmic_SV [COST553430]prostate__NScarcinoma__adenocarcinoma [COSU537]
    4p169p11Cosmic_SVu(4;9)(p16;p11)  Cosmic_SV [COST569615]prostate__NScarcinoma__adenocarcinoma [COSU537]
    6p119p11Cosmic_SVu(6;9)(p11;p11)  Cosmic_SV [COST520543]lung__NScarcinoma__adenocarcinoma  
    9p1110p11Cosmic_SVu(9;10)(p11;p11)  Cosmic_SV [COST365661]NS__NSNS__NS [COSU652]
    9p1110p15Cosmic_SVu(9;10)(p11;p15)  Cosmic_SV [COST222435]pancreas__NScarcinoma__ductal_carcinoma [COSU382]
    9p1111q22Cosmic_SVu(9;11)(p11;q22)  Cosmic_SV [COST740916]prostate__NScarcinoma__adenocarcinoma [COSU537]
    9p1117p13Cosmic_SVu(9;17)(p11;p13)  Cosmic_SV [COST327304]breast__NScarcinoma__ductal_carcinoma [COSU652]
    9p1121p11Cosmic_SVu(9;21)(p11;p11)  Cosmic_SV [COST557335]prostate__NScarcinoma__adenocarcinoma [COSU537]
    9p1121p13Cosmic_SVu(9;21)(p11;p13)  Cosmic_SV [COST722228]prostate__NScarcinoma__adenocarcinoma [COSU537]
    9p114p16Cosmic_SVu(9;4)(p11;p16)  Cosmic_SV [COST577700]prostate__NScarcinoma__adenocarcinoma [COSU537]
    9p114p16Cosmic_SVu(9;4)(p11;p16)  Cosmic_SV [COST768080]prostate__NScarcinoma__adenocarcinoma [COSU537]
    9p119p11Cosmic_SVu(9)(p11;p11)  Cosmic_SV [COST343637]breast__NScarcinoma__ductal_carcinoma [COSU652]
    9p119p24Cosmic_SVu(9)(p11;p24)  Cosmic_SV [COST564196]endometrium__NScarcinoma__carcinosarcoma-malignant_mesodermal_mixed_tumour [COSU677]
    9p119q12Cosmic_SVu(9)(p11;q12)  Cosmic_SV [COST28670]haematopoietic_and_lymphoid_tissue__NSlymphoid_neoplasm__acute_lymphoblastic_T_cell_leukaemia  
    9p119q33Cosmic_SVu(9)(p11;q33)  Cosmic_SV [COST457843]breast__NScarcinoma__HER-positive_carcinoma [COSU668]
    9p219p11Cosmic_SVu(9)(p21;p11)  Cosmic_SV [COST176116]central_nervous_system__brainglioma__astrocytoma_Grade_IV  
    9p249p11Cosmic_SVu(9)(p24;p11)  Cosmic_SV [COST336712]breast__NScarcinoma__ductal_carcinoma [COSU652]
    9q129p11Cosmic_SVu(9)(q12;p11)  Cosmic_SV [COST559326]prostate__NScarcinoma__adenocarcinoma [COSU537]
    9q129p11Cosmic_SVu(9)(q12;p11)  Cosmic_SV [COST565917]prostate__NScarcinoma__adenocarcinoma [COSU537]

    Genes in band 9p11

    (click on headers to reorder columns)
    GoldenPath hg38Band 1Band 2ClassCloneFusionPartner 1Partner 2LinksTopographyMorphologyPubmedOmimAccession
    chr9:40223285-40266392 + 9p11   Gene [G]     ANKRD20A2   [Cosmic]     [Omim] [Entrez]
    chr9:40223319-40266845 + 9p11   Gene [G]     ANKRD20A3       [Omim] [Entrez]
    chr9:40323571-40329220 + 9p11   Gene [G]     FAM95B1       [Omim] [Entrez]
    chr9:40323571-40329220 + 9p11   Gene [G]     LOC105379252       [Omim] [Entrez]
    chr9:40348499-40353658 + 9p11   Gene [G]     GXYLT1P3       [Omim] [Entrez]
    chr9:40463758-40498781 - 9p11   Gene [G]     AQP7P3       [Omim] [Entrez]
    chr9:40499731-40566583 + 9p11   Gene [G]     LOC101929583       [Omim] [Entrez]
    chr9:40499981-40578494 + 9p11   Gene [G]     LOC102724580       [Omim] [Entrez]
    chr9:40929010-40929092 - 9p11   Gene [G]     MIR1299       [Omim] [Entrez]
    chr9:40992261-41039103 + 9p11   Gene [G]     FRG1HP       [Omim] [Entrez]
    chr9:41007015-41074625 - 9p11   Gene [G]     PGM5P2       [Omim] [Entrez]
    chr9:41100967-41108930 - 9p11   Gene [G]     LOC440896       [Omim] [Entrez]
    chr9:41126251-41128975 - 9p11   Gene [G]     FOXD4L6       [Omim] [Entrez]
    chr9:41131309-41189364 - 9p11 10p15 Gene [CT]   CBWD6/KLF6 CBWD6 KLF6 [ChiTaRS]       [Omim] [GenBank]
    chr9:41131309-41189364 - 9p11   Gene [FM]   CR786580.1/CBWD6 CBWD6 CR786580.1   [PubMed] [Omim] [Entrez]
    chr9:41131309-41189364 - 9p11   Gene [G]     CBWD6       [Omim] [Entrez]
    chr9:41358862-41482101 + 9p11   Gene [G]     LOC107984035       [Omim] [Entrez]
    chr9:41694357-41699001 - 9p11   Gene [G]     FAM242F       [Omim] [Entrez]
    chr9:41891890-42129504 - 9p11   Gene [G]     CNTNAP3B   [Cosmic]     [Omim] [Entrez]
    chr9:41891890-42129504 - 9p11 10p12 Gene [M]   MLLT10/CNTNAP3B CNTNAP3B MLLT10 [Cosmic]
    [Mitelman]
    Acute lymphoblastic leukemia/lymphoblastic lymphoma [PubMed] [Omim] [Entrez]
    chr9:42183659-42189887 + 9p11   Gene [G]     SPATA31A6       [Omim] [Entrez]
    chr9:42198862-42206016 + 9p11   Gene [G]     FAM74A7       [Omim] [Entrez]
    chr9:42567859-42569349 - 9p11   Gene [G]     LOC103908605       [Omim] [Entrez]
    chr9:42579805-42586534 - 9p11   Gene [G]     LOC101927827       [Omim] [Entrez]
    chr9:42788400-42789608 + 9p11   Gene [G]     XLOC_007697       [Omim] [Entrez]

    [ Bold normal : A; Italic normal :G; Italic small : E ]

    X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22
    [previous]   9 9p 9q 9p24 9p23 9p22 9p21 9p13 9p12 9p11 9q11 9q12 9q13 9q21 9q22 9q31 9q32 9q33 9q34   [next]

    External links

    Mitelman Database [NCI] : Breakpoint 9p11

    [ UCSC ][ enSembl ][ MapView - NCBI ][ 1000Genomes ][ EVS ][ CGWB ][ DGV ][ DBVar ][ OMIM ][ HapMap ][ DECIPHER ] [ ECARUCA ]
    Gene Expression (MSigDB) in 9p11  [ HTC ]  [ NCI ]  [ INV ]

    Global tables

  • Anomalies list (tabulated txt file)
  • Genes list (tabulated txt file)
  • Anomalies list - limited to abnormalities with gene fusions(tabulated txt file)
  • Genes list - limited to genes fusions (tabulated txt file)
  • list of gene fusions for each gene (with origins of the data)
  • list of gene fusions by origin (with topography and morphology)

    References

    Contributor(s)

    Writtenmay 2012Philippe Dessen
      
    Updatedjuil. 2019Philippe Dessen and Jean-Loup Huret

    Citation

    This paper should be referenced as such :
    Dessen P and Huret JL. Chromosomal band 9p11. Atlas Genet Cytogenet Oncol Haematol. July 2012.
    URL : http://atlasgeneticsoncology.org/Bands/9p11.html
    © Atlas of Genetics and Cytogenetics in Oncology and Haematology
    indexed on : lun. juil. 8 11:36:33 CEST 2019


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