Chromosome 9

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ENTITIES: by Chromosome band

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22

Chromosome 9


[previous]   9 9p 9q 9p24 9p23 9p22 9p21 9p13 9p12 9p11 9q11 9q12 9q13 9q21 9q22 9q31 9q32 9q33 9q34   [next]

Band 9p12

chr9:39000000-40000000 (1000 Kb)

  • Chromosomal abnormalities in band 9p12
  • Genes in band 9p12 (reference hg38)
  • External links
  • References

    Chromosomal abnormalities in band 9p12

    (click on headers to reorder columns)
    Band 1Band 2ClassEntityPartner 1Partner 2LinksTopographyMorphology[PubMed][Study]
    9p12 Cosmic_SVdel(9)(p12)  Cosmic_SV [COST142591]ovary__NScarcinoma__mixed_adenosquamous_carcinoma [COSU585]
    9p12 Cosmic_SVdel(9)(p12)  Cosmic_SV [COST142591]pancreas__NScarcinoid-endocrine_tumour__NS [COSU586]
    9p12 Cosmic_SVdel(9)(p12)  Cosmic_SV [COST151195]ovary__NScarcinoma__mixed_adenosquamous_carcinoma [COSU585]
    9p12 Cosmic_SVdel(9)(p12)  Cosmic_SV [COST160470]ovary__NScarcinoma__mixed_adenosquamous_carcinoma [COSU585]
    9p12 Cosmic_SVdel(9)(p12)  Cosmic_SV [COST195630]bone__NSEwings_sarcoma-peripheral_primitive_neuroectodermal_tumour__NS [COSU645]
      Mitelmandel(9)(p12-21)  Mitelman (CGAP) Acute lymphoblastic leukemia/lymphoblastic lymphoma[PubMed] 
    9p12 Mitelmandel(9)(p12)  Mitelman (CGAP) Acute lymphoblastic leukemia/lymphoblastic lymphoma  
    9p12 Mitelmandel(9)(p12)  Mitelman (CGAP) Acute myeloid leukemia, NOS  
    9p12 Mitelmandel(9)(p12)  Mitelman (CGAP) Bilineage or biphenotypic leukemia  
    9p12 Mitelmandel(9)(p12)  Mitelman (CGAP)BrainAstrocytoma, grade III-IV/Glioblastoma  
    9p12 Mitelmandel(9)(p12)  Mitelman (CGAP) Chronic lymphocytic leukemia  
    9p12 Mitelmandel(9)(p12)  Mitelman (CGAP) Follicular lymphoma  
    9p12 Mitelmandel(9)(p12)  Mitelman (CGAP) Mantle cell lymphoma  
    9p12 Mitelmandel(9)(p12)  Mitelman (CGAP) Mature B-cell neoplasm, NOS  
    9p12 Mitelmandel(9)(p12)  Mitelman (CGAP)PleuraMesothelioma  
    9p129p22Mitelmandel(9)(p12p22)  Mitelman (CGAP) Acute lymphoblastic leukemia/lymphoblastic lymphoma  
    9p129q12Cosmic_SVdel(9)(p12q12)  Cosmic_SV [COST166089]pancreas__NScarcinoid-endocrine_tumour__NS [COSU586]
    9p249p12Cosmic_SVdel(9)(p24p12)  Cosmic_SV [COST118994]pancreas__NScarcinoma__ductal_carcinoma [COSU328]
    9p1212p12Mitelmandic(9;12)(p12;p12)  Mitelman (CGAP) Acute lymphoblastic leukemia/lymphoblastic lymphoma  
    9p1220q11Mitelmandic(9;20)(p12;q11)  Mitelman (CGAP) Acute lymphoblastic leukemia/lymphoblastic lymphoma  
    9p129p12Cosmic_SVdup(9)(p12p12)  Cosmic_SV [COST123586]pancreas__NScarcinoma__ductal_carcinoma [COSU328]
    9p129p12Cosmic_SVdup(9)(p12p12)  Cosmic_SV [COST153400]ovary__NScarcinoma__mixed_adenosquamous_carcinoma [COSU585]
    9p249p12Cosmic_SVdup(9)(p24p12)  Cosmic_SV [COST125724]pancreas__NScarcinoma__ductal_carcinoma [COSU328]
    9p12 Mitelmanidic(9)(p12)  Mitelman (CGAP) Acute lymphoblastic leukemia/lymphoblastic lymphoma  
    9p12 Cosmic_SVins(9)(p12)  Cosmic_SV [COST188666]prostate__NScarcinoma__adenocarcinoma [COSU538]
    9p129q13Mitelmaninv(9)(p12q13)  Mitelman (CGAP) Acute lymphoblastic leukemia/lymphoblastic lymphoma  
    9p129q13Mitelmaninv(9)(p12q13)  Mitelman (CGAP) Acute myeloid leukemia, NOS  
    9p129q13Mitelmaninv(9)(p12q13)  Mitelman (CGAP) Bilineage or biphenotypic leukemia  
    9p129q13Mitelmaninv(9)(p12q13)  Mitelman (CGAP)BreastAdenocarcinoma  
    9p129q13Mitelmaninv(9)(p12q13)  Mitelman (CGAP) Chronic lymphocytic leukemia  
    9p219p21Cosmic_SVinv(9)(p21p21)  Cosmic_SV [COST116539]pancreas__NScarcinoma__ductal_carcinoma [COSU328]
    9p229p22Cosmic_SVinv(9)(p22p22)  Cosmic_SV [COST125716]pancreas__NScarcinoma__ductal_carcinoma [COSU328]
    1p139p12Atlas - Leukemiat(1;9)(p13;p12) PAX5/HIPK1PAX5HIPK1t0109p13p12ID1557B-ALL[Biblio] 
    7q119p12ChiTaRSt(7;9)(q11;p12)  ChiTaRS-[PubMed] 
    7q119p12Atlas - Leukemiat(7;9)(q11;p12) PAX5/POM121PAX5POM121t0709q11p12ID1558B-ALL[Biblio] 
    9p1213q21Atlas - Leukemiat(9;13)(p12;q21) PAX5/DACH1PAX5DACH1t0913p12q21ID1560B-ALL[Biblio] 
    9p1213q21ChiTaRSt(9;13)(p12;q21)  ChiTaRS-[PubMed] 
    9p1214q32Mitelmant(9;14)(p12;q32)  Mitelman (CGAP) Chronic lymphocytic leukemia  
    4q289p12Cosmic_SVu(4;9)(q28;p12)  Cosmic_SV [COST380862]breast__NScarcinoma__ductal_carcinoma [COSU652]
    6p119p12Cosmic_SVu(6;9)(p11;p12)  Cosmic_SV [COST326940]breast__NScarcinoma__ductal_carcinoma [COSU652]
    6p129p12Cosmic_SVu(6;9)(p12;p12)  Cosmic_SV [COST171423]adrenal_gland__adrenal_glandadrenal_cortical_carcinoma__virilizing_syndrome_producing[PubMed] 
    8p119p12Cosmic_SVu(8;9)(p11;p12)  Cosmic_SV [COST228306]haematopoietic_and_lymphoid_tissue__NSlymphoid_neoplasm__adult_T_cell_lymphoma-leukaemia[PubMed] 
    8p219p12Cosmic_SVu(8;9)(p21;p12)  Cosmic_SV [COST375315]breast__NScarcinoma__ductal_carcinoma [COSU652]
    8q129p12Cosmic_SVu(8;9)(q12;p12)  Cosmic_SV [COST354788]breast__NScarcinoma__ductal_carcinoma [COSU652]
    9p1210p15Cosmic_SVu(9;10)(p12;p15)  Cosmic_SV [COST214868]pancreas__NScarcinoma__ductal_carcinoma [COSU382]
    9p1212p13Cosmic_SVu(9;12)(p12;p13)  Cosmic_SV [COST151402]ovary__NScarcinoma__mixed_adenosquamous_carcinoma [COSU585]
    9p1212q21Cosmic_SVu(9;12)(p12;q21)  Cosmic_SV [COST347460]breast__NScarcinoma__ductal_carcinoma [COSU652]
    9p1214p13Cosmic_SVu(9;14)(p12;p13)  Cosmic_SV [COST391285]breast__NScarcinoma__ductal_carcinoma [COSU652]
    9p1218p11Cosmic_SVu(9;18)(p12;p11)  Cosmic_SV [COST371167]breast__NScarcinoma__ductal_carcinoma [COSU652]
    9p121p36Cosmic_SVu(9;1)(p12;p36)  Cosmic_SV [COST462648]pancreas__NScarcinoma__NS [COSU382]
    9p126p12Cosmic_SVu(9;6)(p12;p12)  Cosmic_SV [COST171440]adrenal_gland__adrenal_glandadrenal_cortical_carcinoma__virilizing_syndrome_producing[PubMed] 
    9p129p12Cosmic_SVu(9)(p12;p12)  Cosmic_SV [COST326752]breast__NScarcinoma__ductal_carcinoma [COSU652]
    9p139p12Cosmic_SVu(9)(p13;p12)  Cosmic_SV [COST176098]central_nervous_system__brainglioma__astrocytoma_Grade_IV[PubMed] 
    9p139p12Cosmic_SVu(9)(p13;p12)  Cosmic_SV [COST333600]breast__NScarcinoma__ductal_carcinoma [COSU652]
    9p139p12Cosmic_SVu(9)(p13;p12)  Cosmic_SV [COST379079]breast__NScarcinoma__lobular_carcinoma [COSU652]
    9p219p12Cosmic_SVu(9)(p21;p12)  Cosmic_SV [COST335364]breast__NScarcinoma__ductal_carcinoma [COSU652]
    9p239p12Cosmic_SVu(9)(p23;p12)  Cosmic_SV [COST347359]breast__NScarcinoma__ductal_carcinoma [COSU652]
    9p12Xp22Cosmic_SVu(9;X)(p12;p22)  Cosmic_SV [COST376109]breast__NScarcinoma__ductal_carcinoma [COSU652]

    Genes in band 9p12

    (click on headers to reorder columns)
    GoldenPath hg38Band 1Band 2ClassCloneFusionPartner 1Partner 2LinksTopographyMorphologyPubmedOmimAccession
    chr9:39072767-39288303 - 9p12   Gene [G]     CNTNAP3   [Cosmic]     [Omim] [Entrez]
    chr9:39355669-39361962 + 9p12   Gene [G]     SPATA31A1       [Omim] [Entrez]
    chr9:39444303-39447189 - 9p12 22q11 Gene [CT]   LRP5L/ZNF658B ZNF658B LRP5L [Cosmic]
    [ChiTaRS]  
        [Omim] [GenBank]
    chr9:39444303-39447189 - 9p12   Gene [G]     ZNF658B   [Cosmic]     [Omim] [Entrez]
    chr9:39807381-39810058 - 9p12 12p12 Gene [CT]   LDHB/GLIDR GLIDR LDHB [ChiTaRS]       [Omim] [GenBank]
    chr9:39807381-39810058 - 9p12   Gene [CT]   ND6/GLIDR GLIDR ND6 [ChiTaRS]       [Omim] [GenBank]
    chr9:39807381-39810058 - 9p12   Gene [G]     GLIDR       [Omim] [Entrez]
    chr9:39873853-39875395 + 9p12   Gene [G]     LOC102724238       [Omim] [Entrez]
    chr9:39873857-39875395 + 9p12   Gene [G]     LOC554249       [Omim] [Entrez]

    [ Bold normal : A; Italic normal :G; Italic small : E ]

    X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22
    [previous]   9 9p 9q 9p24 9p23 9p22 9p21 9p13 9p12 9p11 9q11 9q12 9q13 9q21 9q22 9q31 9q32 9q33 9q34   [next]

    External links

    Mitelman Database [NCI] : Breakpoint 9p12

    [ UCSC ][ enSembl ][ MapView - NCBI ][ 1000Genomes ][ EVS ][ CGWB ][ DGV ][ DBVar ][ OMIM ][ HapMap ][ DECIPHER ] [ ECARUCA ]

    Gene Expression (MSigDB) in 9p12  [ HTC ]  [ NCI ]  [ INV ]

    References

    Contributor(s)

    Writtenmay 2012Philippe Dessen
      
    Updatedjuin 2017Philippe Dessen and Jean-Loup Huret

    Citation

    This paper should be referenced as such :
    Dessen P and Huret JL. Chromosomal band 9p12. Atlas Genet Cytogenet Oncol Haematol. July 2012.
    URL : http://atlasgeneticsoncology.org/Bands/9p12.html
    © Atlas of Genetics and Cytogenetics in Oncology and Haematology
    indexed on : mer. juin 7 12:26:38 CEST 2017


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