Chromosome Y

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ENTITIES: by Chromosome band

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22

Chromosome Y


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Band Yp11

chrY:0-12500000 (12500 Kb)

  • Chromosomal abnormalities in band Yp11
  • Genes in band Yp11
  • External links
  • References

    Chromosomal abnormalities in band Yp11

    (click on headers to reorder columns)
    Band 1Band 2ClassEntityPartner 1Partner 2LinksTopographyMorphology[PubMed][Study]
    Yp11 Cosmic_SVdel(Y)(p11)  Cosmic_SV [COST114755]pancreas__NScarcinoma__ductal_carcinoma [COSU328]
    Yp11 Cosmic_SVdel(Y)(p11)  Cosmic_SV [COST185704]skin__NScarcinoma__NS [COSU656]
    Yp11 Cosmic_SVdel(Y)(p11)  Cosmic_SV [COST195955]prostate__NScarcinoma__adenocarcinoma [COSU537]
    Yp11 Cosmic_SVdel(Y)(p11)  Cosmic_SV [COST340994]pancreas__NScarcinoma__NS [COSU382]
    Yp11 Cosmic_SVdel(Y)(p11)  Cosmic_SV [COST452822]pancreas__NScarcinoma__NS [COSU382]
    Yp11 Cosmic_SVdel(Y)(p11)  Cosmic_SV [COST460724]pancreas__NScarcinoma__NS [COSU382]
    Yp11 Cosmic_SVdel(Y)(p11)  Cosmic_SV [COST460969]pancreas__NScarcinoma__NS [COSU382]
    Yp11Yp11ChiTaRSdel(Y)(p11p11)  ChiTaRS-[PubMed] 
    Yp11Yq11Cosmic_SVdel(Y)(p11q11)  Cosmic_SV [COST196034]prostate__NScarcinoma__adenocarcinoma [COSU537]
    Yp11Yq11Cosmic_SVdel(Y)(p11q11)  Cosmic_SV [COST198959]prostate__NScarcinoma__adenocarcinoma [COSU537]
    Yp11Yq11Cosmic_SVdel(Y)(p11q11)  Cosmic_SV [COST237421]bone__NSosteosarcoma__NS[PubMed] 
    Yp11 Cosmic_SVdup(Y)(p11)  Cosmic_SV [COST198787]prostate__NScarcinoma__adenocarcinoma [COSU537]
    Yp11 Cosmic_SVdup(Y)(p11)  Cosmic_SV [COST460725]pancreas__NScarcinoma__NS [COSU382]
    Yp11 Cosmic_SVdup(Y)(p11)  Cosmic_SV [COST466742]pancreas__NScarcinoma__NS [COSU382]
    Yp11Yp11Cosmic_SVdup(Y)(p11p11)  Cosmic_SV [COST128374]pancreas__NScarcinoma__ductal_carcinoma [COSU328]
    Yp11Yp11Cosmic_SVdup(Y)(p11p11)  Cosmic_SV [COST166479]pancreas__NScarcinoid-endocrine_tumour__NS [COSU586]
    Yp11 Cosmic_SVins(Y)(p11)  Cosmic_SV [COST188752]prostate__NScarcinoma__adenocarcinoma [COSU538]
    Yp11 Cosmic_SVins(Y)(p11)  Cosmic_SV [COST189372]prostate__NScarcinoma__adenocarcinoma [COSU538]
    Yp11Yq12dbCRIDinv(Y)(p11.31q12)  10641Gonadoblastoma[PubMed] 
    Yp11 Cosmic_SVinv(Y)(p11)  Cosmic_SV [COST442488]liver__NScarcinoma__NS [COSU322]
    Yp11 Cosmic_SVinv(Y)(p11)  Cosmic_SV [COST446809]pancreas__NScarcinoma__NS [COSU382]
    Yp11 Cosmic_SVinv(Y)(p11)  Cosmic_SV [COST466743]pancreas__NScarcinoma__NS [COSU382]
    Yp11 Cosmic_SVinv(Y)(p11)  Cosmic_SV [COST470639]pancreas__NScarcinoma__NS [COSU382]
    Yp11Yp11Cosmic_SVinv(Y)(p11p11)  Cosmic_SV [COST123347]pancreas__NScarcinoma__ductal_carcinoma [COSU328]
    Yp11Yp11Cosmic_SVinv(Y)(p11p11)  Cosmic_SV [COST192688]pancreas__NScarcinoma__ductal_carcinoma [COSU328]
    Yp11Yq11dbCRIDinv(Y)(p11q11)  10761[PubMed] 
    Yp11Yq11dbCRIDr(Y)(p11q11)  10006[PubMed] 
    Yp11Yq11dbCRIDr(Y)(p11q11)  10007[PubMed] 
    Yp11Yq11dbCRIDr(Y)(p11q11)  10010Azoospermia[PubMed] 
    Xq22Yp11dbCRIDt(X;Y)(q22;p11)  10045[PubMed] 
    Yp1111q23Mitelmant(Y;11)(p11;q23)  Mitelman (CGAP) Acute myelomonocytic leukemia (FAB type M4)[PubMed] 
    Yp1114q32ChiTaRSt(Y;14)(p11;q32)  ChiTaRS-[PubMed] 
    Yp1115q12dbCRIDt(Y;15)(p11.2;q12)  11034[PubMed] 
    Yp1116p11Mitelmant(Y;16)(p11;p11)SRCAPRPS4Y1Mitelman (CGAP)BrainAstrocytoma, grade III-IV/Glioblastoma[PubMed] 
    Yp1122q11dbCRIDt(Y;22)(p11;q11)  10608Chronic Myeloid Leukemia[PubMed] 
    Yp1122q11Mitelmant(Y;22)(p11;q11)  Mitelman (CGAP) Chronic myeloid leukemia, aberrant translocation[PubMed] 
    Yp117p15dbCRIDt(Y;7)(p11.32;p15.3)  10741[PubMed] 
    10q11Yp11Cosmic_SVu(10;Y)(q11;p11)  Cosmic_SV [COST472411]liver__NScarcinoma__NS [COSU322]
    10q23Yp11Cosmic_SVu(10;Y)(q23;p11)  Cosmic_SV [COST190223]prostate__NScarcinoma__adenocarcinoma [COSU538]
    11p15Yp11Cosmic_SVu(11;Y)(p15;p11)  Cosmic_SV [COST114971]pancreas__NScarcinoma__ductal_carcinoma [COSU328]
    12p12Yp11Cosmic_SVu(12;Y)(p12;p11)  Cosmic_SV [COST146313]ovary__NScarcinoma__mixed_adenosquamous_carcinoma [COSU585]
    13q33Yp11Cosmic_SVu(13;Y)(q33;p11)  Cosmic_SV [COST237983]bone__NSosteosarcoma__NS[PubMed] 
    14q12Yp11Cosmic_SVu(14;Y)(q12;p11)  Cosmic_SV [COST121934]pancreas__NScarcinoma__ductal_carcinoma [COSU328]
    15q12Yp11Cosmic_SVu(15;Y)(q12;p11)  Cosmic_SV [COST119399]pancreas__NScarcinoma__ductal_carcinoma [COSU328]
    15q24Yp11Cosmic_SVu(15;Y)(q24;p11)  Cosmic_SV [COST138308]ovary__NScarcinoma__mixed_adenosquamous_carcinoma [COSU585]
    17p11Yp11Cosmic_SVu(17;Y)(p11;p11)  Cosmic_SV [COST448498]liver__NScarcinoma__NS [COSU322]
    17q12Yp11Cosmic_SVu(17;Y)(q12;p11)  Cosmic_SV [COST167299]central_nervous_system__brainprimitive_neuroectodermal_tumour-medulloblastoma__NS [COSU379]
    18q21Yp11Cosmic_SVu(18;Y)(q21;p11)  Cosmic_SV [COST404152]pancreas__NScarcinoma__NS [COSU382]
    19p12Yp11Cosmic_SVu(19;Y)(p12;p11)  Cosmic_SV [COST193670]pancreas__NScarcinoma__ductal_carcinoma [COSU328]
    1q43Yp11Cosmic_SVu(1;Y)(q43;p11)  Cosmic_SV [COST114894]pancreas__NScarcinoma__ductal_carcinoma [COSU328]
    20p13Yp11Cosmic_SVu(20;Y)(p13;p11)  Cosmic_SV [COST335759]pancreas__NScarcinoma__NS [COSU382]
    2p11Yp11Cosmic_SVu(2;Y)(p11;p11)  Cosmic_SV [COST219717]pancreas__NScarcinoma__ductal_carcinoma [COSU382]
    2p23Yp11Cosmic_SVu(2;Y)(p23;p11)  Cosmic_SV [COST355844]breast__NScarcinoma__ductal_carcinoma [COSU652]
    2q31Yp11Cosmic_SVu(2;Y)(q31;p11)  Cosmic_SV [COST117548]pancreas__NScarcinoma__ductal_carcinoma [COSU328]
    4q31Yp11Cosmic_SVu(4;Y)(q31;p11)  Cosmic_SV [COST122368]pancreas__NScarcinoma__ductal_carcinoma [COSU328]
    4q35Yp11Cosmic_SVu(4;Y)(q35;p11)  Cosmic_SV [COST187381]pancreas__NScarcinoid-endocrine_tumour__NS [COSU650]
    4q35Yp11Cosmic_SVu(4;Y)(q35;p11)  Cosmic_SV [COST187381]pancreas__NScarcinoid-endocrine_tumour__NS [COSU661]
    5q11Yp11Cosmic_SVu(5;Y)(q11;p11)  Cosmic_SV [COST238005]bone__NSosteosarcoma__NS[PubMed] 
    6p21Yp11Cosmic_SVu(6;Y)(p21;p11)  Cosmic_SV [COST238052]bone__NSosteosarcoma__NS[PubMed] 
    6p25Yp11Cosmic_SVu(6;Y)(p25;p11)  Cosmic_SV [COST122290]pancreas__NScarcinoma__ductal_carcinoma [COSU328]
    6q12Yp11Cosmic_SVu(6;Y)(q12;p11)  Cosmic_SV [COST121131]pancreas__NScarcinoma__ductal_carcinoma [COSU328]
    6q25Yp11Cosmic_SVu(6;Y)(q25;p11)  Cosmic_SV [COST117581]pancreas__NScarcinoma__ductal_carcinoma [COSU328]
    7p15Yp11Cosmic_SVu(7;Y)(p15;p11)  Cosmic_SV [COST239453]bone__NSosteosarcoma__NS[PubMed] 
    8p23Yp11Cosmic_SVu(8;Y)(p23;p11)  Cosmic_SV [COST462610]liver__NScarcinoma__NS [COSU322]
    8q21Yp11Cosmic_SVu(8;Y)(q21;p11)  Cosmic_SV [COST237706]bone__NSosteosarcoma__NS[PubMed] 
    9p13Yp11Cosmic_SVu(9;Y)(p13;p11)  Cosmic_SV [COST215776]pancreas__NScarcinoma__ductal_carcinoma [COSU382]
    9p21Yp11Cosmic_SVu(9;Y)(p21;p11)  Cosmic_SV [COST123250]pancreas__NScarcinoma__ductal_carcinoma [COSU328]
    9p22Yp11Cosmic_SVu(9;Y)(p22;p11)  Cosmic_SV [COST118103]pancreas__NScarcinoma__ductal_carcinoma [COSU328]
    9p23Yp11Cosmic_SVu(9;Y)(p23;p11)  Cosmic_SV [COST215775]pancreas__NScarcinoma__ductal_carcinoma [COSU382]
    9p24Yp11Cosmic_SVu(9;Y)(p24;p11)  Cosmic_SV [COST214182]pancreas__NScarcinoma__ductal_carcinoma [COSU382]
    9p24Yp11Cosmic_SVu(9;Y)(p24;p11)  Cosmic_SV [COST215777]pancreas__NScarcinoma__ductal_carcinoma [COSU382]
    9p24Yp11Cosmic_SVu(9;Y)(p24;p11)  Cosmic_SV [COST217392]pancreas__NScarcinoma__ductal_carcinoma [COSU382]
    9p24Yp11Cosmic_SVu(9;Y)(p24;p11)  Cosmic_SV [COST225468]pancreas__NScarcinoma__ductal_carcinoma [COSU382]
    9p24Yp11Cosmic_SVu(9;Y)(p24;p11)  Cosmic_SV [COST225469]pancreas__NScarcinoma__ductal_carcinoma [COSU382]
    9q13Yp11Cosmic_SVu(9;Y)(q13;p11)  Cosmic_SV [COST222858]pancreas__NScarcinoma__ductal_carcinoma [COSU382]
    Xp22Yp11Cosmic_SVu(X;Y)(p22;p11)  Cosmic_SV [COST239014]bone__NSosteosarcoma__NS[PubMed] 
    Xq21Yp11Cosmic_SVu(X;Y)(q21;p11)  Cosmic_SV [COST126843]pancreas__NScarcinoma__ductal_carcinoma [COSU328]
    Yp1114p13Cosmic_SVu(Y;14)(p11;p13)  Cosmic_SV [COST367168]pancreas__NScarcinoma__NS [COSU382]
    Yp1117p13Cosmic_SVu(Y;17)(p11;p13)  Cosmic_SV [COST341072]pancreas__NScarcinoma__NS [COSU382]
    Yp1117p13Cosmic_SVu(Y;17)(p11;p13)  Cosmic_SV [COST406796]pancreas__NScarcinoma__NS [COSU382]
    Yp1119q12Cosmic_SVu(Y;19)(p11;q12)  Cosmic_SV [COST340851]pancreas__NScarcinoma__NS [COSU382]
    Yp116p24Cosmic_SVu(Y;6)(p11;p24)  Cosmic_SV [COST361774]pancreas__NScarcinoma__NS [COSU382]
    Yp119p21Cosmic_SVu(Y;9)(p11;p21)  Cosmic_SV [COST115455]pancreas__NScarcinoma__ductal_carcinoma [COSU328]
    Yp119p24Cosmic_SVu(Y;9)(p11;p24)  Cosmic_SV [COST335775]pancreas__NScarcinoma__ductal_carcinoma [COSU382]
    Yp119p24Cosmic_SVu(Y;9)(p11;p24)  Cosmic_SV [COST346232]pancreas__NScarcinoma__ductal_carcinoma [COSU382]
    Yp119p24Cosmic_SVu(Y;9)(p11;p24)  Cosmic_SV [COST367335]pancreas__NScarcinoma__ductal_carcinoma [COSU382]
    Yp119p24Cosmic_SVu(Y;9)(p11;p24)  Cosmic_SV [COST388251]pancreas__NScarcinoma__ductal_carcinoma [COSU382]
    Yp119q13Cosmic_SVu(Y;9)(p11;q13)  Cosmic_SV [COST351200]pancreas__NScarcinoma__ductal_carcinoma [COSU382]
    Yp11Yq11Cosmic_SVu(Y)(p11;q11)  Cosmic_SV [COST237927]bone__NSosteosarcoma__NS[PubMed] 
    Yp11Xq21Cosmic_SVu(Y;X)(p11;q21)  Cosmic_SV [COST186034]skin__NScarcinoma__NS [COSU656]

    Genes in band Yp11

    (click on headers to reorder columns)
    GoldenPath hg19 (Kb)Band 1Band 2ClassCloneFusionPartner 1Partner 2LinksTopographyMorphologyPubmedOmimAccession
    chrY:1470936-1484314 + Yp11   Gene [G]     ASMTL-AS1   [Cosmic]     [Omim] [Entrez]
    chrY:2654896-2655782 - Yp11   Gene [G]     SRY   [Cosmic]     [Omim] [Entrez]
    chrY:2709623-2734997 + Yp11 4q13 Gene [CT]   ALB/RPS4Y1 RPS4Y1 ALB [Cosmic]
    [ChiTaRS]  
        [Omim] [GenBank]
    chrY:2709623-2734997 + Yp11 4q13 Gene [CT]   ALB/RPS4Y1 RPS4Y1 ALB [Cosmic]
    [ChiTaRS]  
        [Omim] [GenBank]
    chrY:2709623-2734997 + Yp11 13q33 Gene [CT]   RPS4Y1/ARGLU1 RPS4Y1 ARGLU1 [Cosmic]
    [ChiTaRS]  
        [Omim] [GenBank]
    chrY:2709623-2734997 + Yp11 19p13 Gene [CT]   RPS4Y1/MKNK2 RPS4Y1 MKNK2 [Cosmic]
    [ChiTaRS]  
        [Omim] [GenBank]
    chrY:2709623-2734997 + Yp11 19q13 Gene [CT]   RPS19/RPS4Y1 RPS4Y1 RPS19 [Cosmic]
    [ChiTaRS]  
        [Omim] [GenBank]
    chrY:2709623-2734997 + Yp11 Yp11 Gene [CT]   RPS4Y1/RPS4Y1 RPS4Y1 RPS4Y1 [Cosmic]
    [ChiTaRS]  
        [Omim] [GenBank]
    chrY:2709623-2734997 + Yp11 13q13 Gene [FC]   DCLK1/RPS4Y1 RPS4Y1 DCLK1 [Cosmic]
    [FusCancer]  
    Hepatocellular cancer [PubMed] [Omim] [Entrez]
    chrY:2709623-2734997 + Yp11 8q12 Gene [FC]   PLAG1/RPS4Y1 RPS4Y1 PLAG1 [Cosmic]
    [FusCancer]  
    Hepatocellular cancer [PubMed] [Omim] [Entrez]
    chrY:2709623-2734997 + Yp11 8q12 Gene [G]   PLAG1/RPS4Y1 RPS4Y1 PLAG1 [Cosmic]     [Omim] [Entrez]
    chrY:2709623-2734997 + Yp11 16p11 Gene [M]   SRCAP/RPS4Y1 RPS4Y1 SRCAP [Cosmic]
    [Mitelman]
    Brain Astrocytoma, grade III-IV/Glioblastoma [PubMed] [Omim] [Entrez]
    chrY:2709623-2734997 + Yp11 16p11 Gene [TF]   SRCAP/RPS4Y1 RPS4Y1 SRCAP [Cosmic]
    [TCGA]
    [TCGA-GBM]   [PubMed] [Omim] [Entrez]
    chrY:2803518-2850547 + Yp11   Gene [G]     ZFY   [Cosmic]     [Omim] [Entrez]
    chrY:2871037-2970313 + Yp11   Gene [G]     LINC00278       [Omim] [Entrez]
    chrY:3447126-3448082 + Yp11   Gene [G]     TGIF2LY   [Cosmic]     [Omim] [Entrez]
    chrY:4868267-4973639 + Yp11 6p21 Gene [CT]   MICB/PCDH11Y PCDH11Y MICB [Cosmic]
    [ChiTaRS]  
        [Omim] [GenBank]
    chrY:4868267-4973639 + Yp11   Gene [G]     PCDH11Y   [Cosmic]     [Omim] [Entrez]
    chrY:6114264-6117053 + Yp11   Gene [G]     TSPY2   [Cosmic]     [Omim] [Entrez]
    chrY:6225260-6229454 - Yp11   Gene [G]     LINC00280       [Omim] [Entrez]
    chrY:6258442-6279605 + Yp11   Gene [G]     TTTY1B       [Omim] [Entrez]
    chrY:6258442-6279605 + Yp11   Gene [G]     TTTY1       [Omim] [Entrez]
    chrY:6311475-6315118 + Yp11   Gene [G]     TTTY21B       [Omim] [Entrez]
    chrY:6311475-6315118 + Yp11   Gene [G]     TTTY21       [Omim] [Entrez]
    chrY:6317509-6325947 + Yp11   Gene [G]     TTTY7B       [Omim] [Entrez]
    chrY:6317509-6325947 + Yp11   Gene [G]     TTTY7       [Omim] [Entrez]
    chrY:6733959-6742068 - Yp11   Gene [G]     AMELY   [Cosmic]     [Omim] [Entrez]
    chrY:6778727-6959724 + Yp11 18q11 Gene [CT]   GATA6/TBL1Y TBL1Y GATA6 [Cosmic]
    [ChiTaRS]  
        [Omim] [GenBank]
    chrY:6778727-6959724 + Yp11   Gene [G]     TBL1Y   [Cosmic]     [Omim] [Entrez]
    chrY:7567398-7569288 - Yp11   Gene [AM]   RFTN1P1/TTTY16 TTTY16 RFTN1P1 [TCGA-HNSC]     [Omim] [Entrez]
    chrY:7567398-7569288 - Yp11   Gene [G]     TTTY16       [Omim] [Entrez]
    chrY:7672965-7678723 + Yp11   Gene [G]     TTTY12       [Omim] [Entrez]
    chrY:8506335-8513170 + Yp11   Gene [G]     LINC00279       [Omim] [Entrez]
    chrY:8551411-8551919 - Yp11   Gene [G]     TTTY18       [Omim] [Entrez]
    chrY:8572513-8573324 + Yp11   Gene [G]     TTTY19       [Omim] [Entrez]
    chrY:8651359-8685423 - Yp11   Gene [G]     TTTY11       [Omim] [Entrez]
    chrY:9154670-9160483 - Yp11   Gene [G]     RBMY1A3P       [Omim] [Entrez]
    chrY:9167489-9172441 - Yp11   Gene [G]     TTTY20       [Omim] [Entrez]
    chrY:9175073-9177887 + Yp11   Gene [G]     TSPY10   [Cosmic]     [Omim] [Entrez]
    chrY:9195452-9218480 + Yp11   Gene [G]     TSPY4   [Cosmic]     [Omim] [Entrez]
    chrY:9195452-9198202 + Yp11   Gene [G]     TSPY8   [Cosmic]     [Omim] [Entrez]
    chrY:9236030-9238826 + Yp11   Gene [G]     TSPY3   [Cosmic]     [Omim] [Entrez]
    chrY:9304564-9307358 + Yp11   Gene [A]     TSPY1   [Cosmic]     [Omim] [Entrez]
    chrY:9362880-9363411 - Yp11   Gene [E]     FAM197Y6       [Omim] [Entrez]
    chrY:9448330-9452762 - Yp11   Gene [G]     RBMY3AP       [Omim] [Entrez]
    chrY:9528709-9531308 + Yp11   Gene [G]     TTTY8B       [Omim] [Entrez]
    chrY:9528709-9531308 + Yp11   Gene [G]     TTTY8       [Omim] [Entrez]
    chrY:9573895-9596085 + Yp11   Gene [G]     TTTY2B       [Omim] [Entrez]
    chrY:9573895-9596085 + Yp11   Gene [G]     TTTY2       [Omim] [Entrez]
    chrY:9638762-9650854 + Yp11   Gene [G]     TTTY22       [Omim] [Entrez]
    chrY:9748407-9749571 + Yp11   Gene [G]     TTTY23B       [Omim] [Entrez]
    chrY:9748407-9749571 + Yp11   Gene [G]     TTTY23       [Omim] [Entrez]

    [ Bold normal : A; Italic normal :G; Italic small : E ]

    X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22
    [previous]   Y Yp Yq Yp11 Yp10 Yq10 Yq11 Yq12   [next]

    External links

    Mitelman Database [NCI] : Breakpoint Yp11

    [ UCSC ][ enSembl ][ MapView - NCBI ][ 1000Genomes ][ EVS ][ CGWB ][ DGV ][ DBVar ][ OMIM ][ HapMap ][ DECIPHER ] [ ECARUCA ]

    Gene Expression (MSigDB) in Yp11  [ HTC ]  [ NCI ]  [ INV ]

    References

    Contributor(s)

    Writtenmay 2012Philippe Dessen
      
    Updatedfévr. 2017Philippe Dessen and Jean-Loup Huret

    Citation

    This paper should be referenced as such :
    Dessen P and Huret JL. Chromosomal band Yp11. Atlas Genet Cytogenet Oncol Haematol. July 2012.
    URL : http://atlasgeneticsoncology.org/Bands/Yp11.html
    © Atlas of Genetics and Cytogenetics in Oncology and Haematology
    indexed on : mar. févr. 14 12:37:13 CET 2017


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