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AMP19 (AML1 partner from chromosome 19)

Written2000-02Jean-Loup Huret
Genetics, Dept Medical Information, University of Poitiers, CHU Poitiers Hospital, F-86021 Poitiers, France

(Note : for Links provided by Atlas : click)

Identity

Other alias
HGNC (Hugo) -
LocusID (NCBI) -
Atlas_Id 235
Location 19q13.4  [Link to chromosome band 19q13]
Location_base_pair Starts at 34859473 and ends at 34887112 bp from pter
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

DNA/RNA

Transcription 5.5 kB mRNA

Protein

Expression wide; highest expression in heart
Homology none

Implicated in

Note
  
Entity t(19;21)(q13.4;q22) with AML1 involvement
Disease acute non lymphocytic leukemia (AML) secondary to toxic exposure
  

Bibliography

Fusion AML1 transcript in a radiation-associated leukemia results in a truncated inhibitory AML1 protein.
Hromas R, Busse T, Carroll A, Mack D, Shopnick R, Zhang DE, Nakshatri H, Richkind K
Blood. 2001 ; 97 (7) : 2168-2170.
PMID 11264187
 

Citation

This paper should be referenced as such :
Huret, JL
AMP-19 (AML1 partner from chromosome 19)
Atlas Genet Cytogenet Oncol Haematol. 2000;4(1):10-10.
Free journal version : [ pdf ]   [ DOI ]
On line version : http://AtlasGeneticsOncology.org/Genes/AMP19ID235.html


Other Leukemias implicated (Data extracted from papers in the Atlas) [ 1 ]
  t(19;21)(q13.4;q22) RUNX1 truncated


External links

Nomenclature
HGNC (Hugo)-   -
Cards
AtlasAMP19ID235
Entrez_Gene (NCBI)AMP19  -  -
Aliases
GeneCards (Weizmann)AMP19
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr21:34859473-34887112 [Contig_View]  AMP19 [Vega]
TCGA cBioPortalAMP19
AceView (NCBI)AMP19
Genatlas (Paris)AMP19
WikiGenes-
SOURCE (Princeton)AMP19
Genetics Home Reference (NIH)AMP19
Genomic and cartography
GoldenPath hg38 (UCSC)AMP19  -     chr21:34859473-34887112 -  hg19-Feb_2009   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)AMP19  -     hg19-Feb_2009   [Description]    (hg19-Feb_2009)
EnsemblAMP19 - hg19-Feb_2009 [CytoView hg19]  AMP19 - hg19-Feb_2009 [CytoView hg38]
Mapping of homologs : NCBIAMP19 [Mapview hg19]  AMP19 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)AMP19
Gene ExpressionAMP19 [ NCBI-GEO ]   AMP19 [ EBI - ARRAY_EXPRESS ]   AMP19 [ SEEK ]   AMP19 [ MEM ]
Gene Expression Viewer (FireBrowse)AMP19 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)-
GTEX Portal (Tissue expression)AMP19
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)AMP19
DMDM Disease mutations-
Blocks (Seattle)AMP19
Protein Interaction databases
BioGRIDAMP19
STRING (EMBL)AMP19
ZODIACAMP19
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease-
BioCentury BCIQAMP19
ClinGenAMP19
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD-
Clinical trialAMP19
Miscellaneous
canSAR (ICR)AMP19 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineAMP19
EVEXAMP19
GoPubMedAMP19
iHOPAMP19
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Oct 12 16:16:06 CEST 2017

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jlhuret@AtlasGeneticsOncology.org.