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AMP19 (AML1 partner from chromosome 19)

Written2000-02Jean-Loup Huret
Genetics, Dept Medical Information, University of Poitiers, CHU Poitiers Hospital, F-86021 Poitiers, France

(Note : for Links provided by Atlas : click)

Identity

HGNC (Hugo) -
LocusID (NCBI) -
Atlas_Id 235
Location 19q13.4  [Link to chromosome band 19q13]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

DNA/RNA

Transcription 5.5 kB mRNA

Protein

Expression wide; highest expression in heart
Homology none

Implicated in

Note
  
Entity t(19;21)(q13.4;q22) with AML1 involvement
Disease acute non lymphocytic leukemia (AML) secondary to toxic exposure
  

Bibliography

Fusion AML1 transcript in a radiation-associated leukemia results in a truncated inhibitory AML1 protein.
Hromas R, Busse T, Carroll A, Mack D, Shopnick R, Zhang DE, Nakshatri H, Richkind K
Blood. 2001 ; 97 (7) : 2168-2170.
PMID 11264187
 

Citation

This paper should be referenced as such :
Huret, JL
AMP-19 (AML1 partner from chromosome 19)
Atlas Genet Cytogenet Oncol Haematol. 2000;4(1):10-10.
Free journal version : [ pdf ]   [ DOI ]


Other Leukemias implicated (Data extracted from papers in the Atlas) [ 1 ]
  t(19;21)(q13.4;q22) RUNX1 truncated


External links

Nomenclature
HGNC (Hugo)-   -
Cards
AtlasAMP19ID235
Entrez_Gene (NCBI)AMP19    -
Aliases
GeneCards (Weizmann)AMP19
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  - [Contig_View]  AMP19 [Vega]
TCGA cBioPortalAMP19
AceView (NCBI)AMP19
Genatlas (Paris)AMP19
SOURCE (Princeton)AMP19
Genetics Home Reference (NIH)AMP19
Genomic and cartography
GoldenPath hg38 (UCSC)AMP19  -  
GoldenPath hg19 (UCSC)AMP19  -  
GoldenPathAMP19 - [CytoView hg19]  AMP19 - [CytoView hg38]
genome Data Viewer NCBIAMP19 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)AMP19
Gene ExpressionAMP19 [ NCBI-GEO ]   AMP19 [ EBI - ARRAY_EXPRESS ]   AMP19 [ SEEK ]   AMP19 [ MEM ]
Gene Expression Viewer (FireBrowse)AMP19 [ Firebrowse - Broad ]
GenevisibleExpression of AMP19 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)-
GTEX Portal (Tissue expression)AMP19
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)AMP19
Blocks (Seattle)AMP19
Protein Interaction databases
BioGRIDAMP19
STRING (EMBL)AMP19
ZODIACAMP19
Ontologies - Pathways
Litterature
GeneRIFsGene References Into Functions (Entrez)
EVEXAMP19
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 25 19:55:08 CET 2021

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jlhuret@AtlasGeneticsOncology.org.