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ARHGEF2 (rho/rac guanine nucleotide exchange factor (GEF) 2)

Identity

Other namesDKFZp547L106
DKFZp547P1516
GEF
GEF-H1
GEFH1
KIAA0651
LFP40
P40
Hugo ARHGEF2
Location 1q22

DNA/RNA

Note Cloning of human ARHGEF2/GEF-H1 from HELA cells. Cloning and characterization of murine (Lfc) and canine (cGEF-H1) rho/rac guanine nucleotide exchange factors homologues to ARHGEF2/GEF-H1.
Transcription 4093 bp mRNA; 2877 bp open reading frame

Protein

 
  A schematics representing the domain structure of full length ARHGEF2/GEF-H1
Description The gene encodes a guanine nucleotide exchange factor for Rho GTPase; 985 amino acids; NH2- Protein kinase C conserved region 1 (zinc finger motif), Dbl-homologous domain (DH domain), pleckstrin homology (PH) domain - coiled coil c-terminus domain -COOH.
Expression Wide (cochlea, bone marrow, lymph, blood, lung, ovary, cranial nerve, lymph node, colon, spleen, kidney, muscle, eye, bone, cervix, nerve, adrenal gland, heart, skin, thyroid, uterus, testis, pancreas, brain, mouth, stomach, thymus, pharynx, prostate, vascular, mammary gland, placenta).
Localisation Microtubules
Function ARHGEF2/GEF-H1 belongs to a Dbl family of Rho activators and exhibits Rho-specific GDP/GTP exchange activity for RhoA but not for Rac1 or Cdc42. ARHGEF2/GEF-H1 activity is downregulated by interaction of its C-terminus with microtubules. Therefore, ARHGEF2/GEF-H1 links changes in microtubule integrity to Rho-dependent regulation of the actin cytoskeleton. Activated RhoA transduces various signals into downstream signaling cascades, such as cytoskeleton reorganization, cellular invasion, and cell proliferation, all of which contribute to cancer progression.
Like other RhoGEF Dbl members, ARHGEF2/GEF-H1 possesses the Dbl-homology (DH) domain responsible for its GEF activity the pleckstrin-homology (PH) domain, adjacent and C-terminal to the DH domain. In addition, ARHGEF2/GEF-H1 also contains a cysteine-rich zinc finger-like motif at its amino terminus and a proline-rich coiled coil domain at its carboxy terminus. The N- and C-terminal motifs mediate microtubule localization of ARHGEF2/GEF-H1. Point mutated (cys53 to arg) in a zinc finger-like motif, as well as N- and C-terminally truncated ARHGEF2/GEF-H1 proteins are loosing ability to bind microtubules. These truncated forms have no affect on microtubule stability, and displaying even higher GEF activity then microtubule-bound forms. The coiled coil domain at C-terminus may interact with SH3 domain-containing proteins and has a potential binding site for 14-3-3 proteins. The ser885 within the 14-3-3-binding site is a phosphorylation site for p21-activated kinase 1 (PAK1), an effector of RAC and CDC42 GTPases. The phosphorylation of ARHGEF2/GEFH1 by PAK may coordinate Rac/Cdc42- and Rho-dependent signaling pathways.
Homology The high level of homology has been shown for three known rho/rac guanine nucleotide exchange factors originated from human, mouse and dog.

Implicated in

Entity gastrointestinal mesenchymal malignancies
Disease Microarray analysis identified ARHGEF2/GEF-H1 as one of response markers for a treatment of gastrointestinal stromal tumors, implicating its role in the development of gastrointestinal mesenchymal malignancies.
Oncogenesis A cell line transformed by ARHGEF2/GEF-H1 transfection can induce tumor development after injection into nude mice. The increased ARHGEF2/GEF-H1 expression was found contributing to the tumor progression phenotype associated with the p53 mutation.
  

External links

Nomenclature
HugoARHGEF2
GDBARHGEF2
Entrez_GeneARHGEF2  9181  rho/rac guanine nucleotide exchange factor (GEF) 2
Cards
AtlasARHGEF2ID43150ch1q22
GeneCardsARHGEF2
EnsemblARHGEF2 [Search_View]   ENSG00000116584 [Gene_View]
GenatlasARHGEF2
GeneLynxARHGEF2
eGenomeARHGEF2
euGene9181
Genomic and cartography
GoldenPathARHGEF2  -  1q22   chr1:154183270-154214575 -  1q21-q22   [Description]    (hg18-Mar_2006)
EnsemblARHGEF2 - 1q21-q22 [CytoView]
NCBIMapview
OMIMDisease map [OMIM]
HomoloGeneARHGEF2
Gene and transcription
GenbankAB014551 [ ENTREZ ]
GenbankAF486838 [ ENTREZ ]
GenbankAL512715 [ ENTREZ ]
GenbankAL832538 [ ENTREZ ]
GenbankAM393305 [ ENTREZ ]
RefSeqNM_004723 [ SRS ]    NM_004723 [ ENTREZ ]
RefSeqAC_000044 [ SRS ]    AC_000044 [ ENTREZ ]
RefSeqNC_000001 [ SRS ]    NC_000001 [ ENTREZ ]
RefSeqNT_004487 [ SRS ]    NT_004487 [ ENTREZ ]
RefSeqNW_925683 [ SRS ]    NW_925683 [ ENTREZ ]
AceViewARHGEF2 AceView - NCBI
UnigeneHs.655209 [ SRS ]    Hs.655209 [ NCBI ]     HS655209 [ spliceNest ]
Fast-db17384 (alternative variants)
Protein : pattern, domain, 3D structure
SwissProtQ92974 [ SRS]    Q92974 [ EXPASY ]     Q92974 [ INTERPRO ]
PrositePS00741 DH_1 [ SRS ]    PS00741 DH_1 [ Expasy ]
PrositePS50010 DH_2 [ SRS ]    PS50010 DH_2 [ Expasy ]
PrositePS50003 PH_DOMAIN [ SRS ]    PS50003 PH_DOMAIN [ Expasy ]
PrositePS00479 ZF_DAG_PE_1 [ SRS ]    PS00479 ZF_DAG_PE_1 [ Expasy ]
PrositePS50081 ZF_DAG_PE_2 [ SRS ]    PS50081 ZF_DAG_PE_2 [ Expasy ]
InterproIPR002219 DAG_PE_bd [ SRS ]    IPR002219 DAG_PE_bd [ EBI ]
InterproIPR000219 DH-domain [ SRS ]    IPR000219 DH-domain [ EBI ]
InterproIPR001331 GDS_CDC24_CS [ SRS ]    IPR001331 GDS_CDC24_CS [ EBI ]
InterproIPR001849 PH [ SRS ]    IPR001849 PH [ EBI ]
InterproIPR011993 PH_type [ SRS ]    IPR011993 PH_type [ EBI ]
InterproIPR015721 RhoGEF_like [ SRS ]    IPR015721 RhoGEF_like [ EBI ]
CluSTrQ92974
PfamPF00130 C1_1 [ SRS ]    PF00130 C1_1 [ Sanger ]    pfam00130 [ NCBI-CDD ]
PfamPF00169 PH [ SRS ]    PF00169 PH [ Sanger ]    pfam00169 [ NCBI-CDD ]
PfamPF00621 RhoGEF [ SRS ]    PF00621 RhoGEF [ Sanger ]    pfam00621 [ NCBI-CDD ]
SmartSM00109 C1 [EMBL]
SmartSM00233 PH [EMBL]
SmartSM00325 RhoGEF [EMBL]
BlocksQ92974
HPRD10458
Protein Interaction databases
DIPQ92974
IntActQ92974
Polymorphism : SNP, mutations, diseases
OMIM607560    [ map ]   
GENECLINICS607560
SNPARHGEF2 [dbSNP-NCBI]  
SNPNM_004723 [SNP-NCI]  
SNPARHGEF2 [GeneSNPs - Utah]  ARHGEF2] [HGBASE - SRS]
HAPMAPARHGEF2 [HAPMAP]  
COSMICARHGEF2 [Somatic mutation (COSMIC-CGP-Sanger)]  
HGMDARHGEF2
General knowledge
Family BrowserARHGEF2 [UCSC Family Browser]
SOURCENM_004723
SMDHs.655209
SAGEHs.655209
GOcell morphogenesis [Amigo]  cell morphogenesis
GOcell morphogenesis [Amigo]  cell morphogenesis
GOguanyl-nucleotide exchange factor activity [Amigo]  guanyl-nucleotide exchange factor activity
GORho guanyl-nucleotide exchange factor activity [Amigo]  Rho guanyl-nucleotide exchange factor activity
GOintracellular [Amigo]  intracellular
GOmicrotubule [Amigo]  microtubule
GOmicrotubule [Amigo]  microtubule
GOintracellular protein transport [Amigo]  intracellular protein transport
GOactin filament organization [Amigo]  actin filament organization
GOactin filament organization [Amigo]  actin filament organization
GOnegative regulation of microtubule depolymerization [Amigo]  negative regulation of microtubule depolymerization
GOnegative regulation of microtubule depolymerization [Amigo]  negative regulation of microtubule depolymerization
GOintracellular signaling cascade [Amigo]  intracellular signaling cascade
GOmicrotubule binding [Amigo]  microtubule binding
GOmicrotubule binding [Amigo]  microtubule binding
GOzinc ion binding [Amigo]  zinc ion binding
GOzinc ion binding [Amigo]  zinc ion binding
GORac guanyl-nucleotide exchange factor activity [Amigo]  Rac guanyl-nucleotide exchange factor activity
GORac guanyl-nucleotide exchange factor activity [Amigo]  Rac guanyl-nucleotide exchange factor activity
GOregulation of Rho protein signal transduction [Amigo]  regulation of Rho protein signal transduction
GOregulation of Rho protein signal transduction [Amigo]  regulation of Rho protein signal transduction
GOregulation of cell proliferation [Amigo]  regulation of cell proliferation
GOmetal ion binding [Amigo]  metal ion binding
GORac GTPase binding [Amigo]  Rac GTPase binding
GORac GTPase binding [Amigo]  Rac GTPase binding
PubGeneARHGEF2
TreeFamARHGEF2
CTD9181 [Comparative ToxicoGenomics Database]
Other databases
Probes
ProbeARHGEF2 Related clones (RZPD - Berlin)
PubMed
PubMed24 Pubmed reference(s) in LocusLink

Bibliography

Cloning and characterization of GEF-H1, a microtubule-associated guanine nucleotide exchange factor for Rac and Rho GTPases.
Ren Y, Li R, Zheng Y, Busch H
The Journal of biological chemistry. 1998 ; 273 (52) : 34954-34960.
PMID 9857026
 
The Dbl-related protein, Lfc, localizes to microtubules and mediates the activation of Rac signaling pathways in cells.
Glaven JA, Whitehead I, Bagrodia S, Kay R, Cerione RA
The Journal of biological chemistry. 1999 ; 274 (4) : 2279-2285.
PMID 9890991
 
Nucleotide exchange factor GEF-H1 mediates cross-talk between microtubules and the actin cytoskeleton.
Krendel M, Zenke FT, Bokoch GM
Nature cell biology. 2002 ; 4 (4) : 294-301.
PMID 11912491
 
Identification of a tight junction-associated guanine nucleotide exchange factor that activates Rho and regulates paracellular permeability.
Benais-Pont G, Punn A, Flores-Maldonado C, Eckert J, Raposo G, Fleming TP, Cereijido M, Balda MS, Matter K
The Journal of cell biology. 2003 ; 160 (5) : 729-740.
PMID 12604587
 
p21-activated kinase 1 phosphorylates and regulates 14-3-3 binding to GEF-H1, a microtubule-localized Rho exchange factor.
Zenke FT, Krendel M, DerMardirossian C, King CC, Bohl BP, Bokoch GM
The Journal of biological chemistry. 2004 ; 279 (18) : 18392-18400.
PMID 14970201
 
Activation of gef-h1, a guanine nucleotide exchange factor for RhoA, by DNA transfection.
Brecht M, Steenvoorden AC, Collard JG, Luf S, Erz D, Bartram CR, Janssen JW
International journal of cancer. Journal international du cancer. 2005 ; 113 (4) : 533-540.
PMID 15455375
 
Mutant p53 induces the GEF-H1 oncogene, a guanine nucleotide exchange factor-H1 for RhoA, resulting in accelerated cell proliferation in tumor cells.
Mizuarai S, Yamanaka K, Kotani H
Cancer research. 2006 ; 66 (12) : 6319-6326.
PMID 16778209
 
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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Contributor(s)

Written05-2007Valery Poroyko, Anna Birukova
The University of Chicago, Department of Medicine, Section of Pulmonary and Critical Care, 929 E. 57th Street, GCIS Bldg, Office W410, Chicago, IL 60637. USA

Citation

This paper should be referenced as such :
Poroyko V, Birukova A . ARHGEF2 (rho/rac guanine nucleotide exchange factor (GEF) 2). Atlas Genet Cytogenet Oncol Haematol. May 2007 .
URL : http://AtlasGeneticsOncology.org/Genes/ARHGEF2ID43150ch1q22.html

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jul 2 08:21:54 2008


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