Atlas of Genetics and Cytogenetics in Oncology and Haematology


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BUB1B (BUB1 budding uninhibited by benzimidazoles 1 homolog beta (yeast))

Identity

Other namesBUBR1
Bub1A
MAD3L
Hugo BUB1B
Location 15q15

DNA/RNA

 
  Figure 1 : Schematic representation of BUB1B demonstrating the relative exon sizes (introns are not drawn to scale)
Description The gene spans 60 kb and is composed of 23 exons

Protein

 
  Figure 2 : Schematic representation of BUBR1 showing position of mutations, with truncating mutations depicted above the protein and missense mutations below.
Note Protein name: BUBR1
Description 1050 amino acids, 120 kDa
Expression Ubiquituously expressed.
Localisation Cytoplasmic in interphase cells. Bound to BUB3 or CENPE, it can be localized to nuclear kinetochores.
Function A central component of the mitotic spindle checkpoint that directly inhibits the anaphase-promoting complex/cyclosome until sister chromatids are correctly attached to the spindle, thus ensuring proper chromosome segregation during cell division. Also binds the motor protein CENPE, an interaction required for regulation of kinetochore-microtubule interactions and checkpoint signalling.
Homology BUBR1 is the mammalian homolog of yeast Mad3, a significant difference being that BUBR1 possesses a kinase domain which is absent in Mad3.

Mutations

Note See figure 2 above
Germinal Biallelic germline mutations found in five Mosaic Variegated Aneuploidy (MVA) cases. Each family carries one missense mutation and one mutation that results in premature protein truncation or an absent transcript.
Somatic Deletion of T at codon 1023 predicted to remove part of the kinase domain.

Implicated in

Entity Mosaic variegated aneuploidy (MVA)
Note is a rare recessive condition characterised by mosaic aneuploidies, predominantly trisomies and monosomies, involving multiple different chromosomes and tissues. Affected individuals typically present with severe intrauterine growth retardation and microcephaly. Eye anomalies, mild dysmorphism, variable developmental delay and a broad spectrum of additional congenital abnormalities and medical conditions may also occur
Prognosis There is early mortality in a significant proportion of cases due to failure to thrive and/or complications of congenital abnormalities, epilepsy, infections or malignancy.
Cytogenetics The proportion of aneuploid cells varies but is usually >25% and is substantially greater than in normal individuals.
Oncogenesis The risk of malignancy in MVA is high, with rhabdomyosarcoma, Wilms tumour and leukaemia reported in several cases. Two of the five cases with BUB1B mutations developed an embryonal rhabdomyosarcoma.
  

External links

Nomenclature
HugoBUB1B
GDBBUB1B
Entrez_GeneBUB1B  701  BUB1 budding uninhibited by benzimidazoles 1 homolog beta (yeast)
Cards
AtlasBUB1BID854ch15q15
GeneCardsBUB1B
EnsemblBUB1B [Search_View]   ENSG00000156970 [Gene_View]
GenatlasBUB1B
GeneLynxBUB1B
eGenomeBUB1B
euGene701
Genomic and cartography
GoldenPathBUB1B  -  15q15   chr15:38240530-38300627 +  15q15   [Description]    (hg18-Mar_2006)
EnsemblBUB1B - 15q15 [CytoView]
NCBIMapview
OMIMDisease map [OMIM]
HomoloGeneBUB1B
Gene and transcription
GenbankAB208782 [ ENTREZ ]
GenbankAF035933 [ ENTREZ ]
GenbankAF046079 [ ENTREZ ]
GenbankAF046918 [ ENTREZ ]
GenbankAF053306 [ ENTREZ ]
RefSeqNM_001211 [ SRS ]    NM_001211 [ ENTREZ ]
RefSeqAC_000058 [ SRS ]    AC_000058 [ ENTREZ ]
RefSeqNC_000015 [ SRS ]    NC_000015 [ ENTREZ ]
RefSeqNT_010194 [ SRS ]    NT_010194 [ ENTREZ ]
RefSeqNW_925840 [ SRS ]    NW_925840 [ ENTREZ ]
AceViewBUB1B AceView - NCBI
UnigeneHs.631699 [ SRS ]    Hs.631699 [ NCBI ]     HS631699 [ spliceNest ]
Fast-db2064 (alternative variants)
Protein : pattern, domain, 3D structure
SwissProtO60566 [ SRS]    O60566 [ EXPASY ]     O60566 [ INTERPRO ]
PrositePS00107 PROTEIN_KINASE_ATP [ SRS ]    PS00107 PROTEIN_KINASE_ATP [ Expasy ]
PrositePS50011 PROTEIN_KINASE_DOM [ SRS ]    PS50011 PROTEIN_KINASE_DOM [ Expasy ]
PrositePS00108 PROTEIN_KINASE_ST [ SRS ]    PS00108 PROTEIN_KINASE_ST [ Expasy ]
InterproIPR015661 Bub1 [ SRS ]    IPR015661 Bub1 [ EBI ]
InterproIPR013212 Mad3_BUB1_I [ SRS ]    IPR013212 Mad3_BUB1_I [ EBI ]
InterproIPR000719 Prot_kinase_core [ SRS ]    IPR000719 Prot_kinase_core [ EBI ]
InterproIPR008271 Ser_thr_pkin_AS [ SRS ]    IPR008271 Ser_thr_pkin_AS [ EBI ]
CluSTrO60566
PfamPF08311 Mad3_BUB1_I [ SRS ]    PF08311 Mad3_BUB1_I [ Sanger ]    pfam08311 [ NCBI-CDD ]
SmartSM00777 Mad3_BUB1_I [EMBL]
ProdomPD000001 Prot_kinase[INRA-Toulouse]
ProdomO60566 BUB1B_HUMAN [ Domain structure ]   O60566 BUB1B_HUMAN  [ sequences sharing at least 1 domain ]
BlocksO60566
HPRD04176
Protein Interaction databases
DIPO60566
IntActO60566
Polymorphism : SNP, mutations, diseases
OMIM114500;602860    [ map ]   
GENECLINICS114500;602860
SNPBUB1B [dbSNP-NCBI]  
SNPNM_001211 [SNP-NCI]  
SNPBUB1B [GeneSNPs - Utah]  BUB1B] [HGBASE - SRS]
HAPMAPBUB1B [HAPMAP]  
COSMICBUB1B [Somatic mutation (COSMIC-CGP-Sanger)]  
HGMDBUB1B
General knowledge
Family BrowserBUB1B [UCSC Family Browser]
SOURCENM_001211
SMDHs.631699
SAGEHs.631699
Enzyme2.7.11.1 [ Enzyme-SRS ]   2.7.11.1 [ Brenda-SRS ]   2.7.11.1 [ KEGG ]   2.7.11.1 [ WIT ]
GOnucleotide binding [Amigo]  nucleotide binding
GOkinetochore [Amigo]  kinetochore
GOkinetochore [Amigo]  kinetochore
GOouter kinetochore of condensed chromosome [Amigo]  outer kinetochore of condensed chromosome
GOprotein serine/threonine kinase activity [Amigo]  protein serine/threonine kinase activity
GOprotein binding [Amigo]  protein binding
GOATP binding [Amigo]  ATP binding
GOnucleus [Amigo]  nucleus
GOanaphase-promoting complex [Amigo]  anaphase-promoting complex
GOcytoplasm [Amigo]  cytoplasm
GOprotein amino acid phosphorylation [Amigo]  protein amino acid phosphorylation
GOapoptosis [Amigo]  apoptosis
GOcell cycle [Amigo]  cell cycle
GOspindle organization and biogenesis [Amigo]  spindle organization and biogenesis
GOmitosis [Amigo]  mitosis
GOmitotic cell cycle checkpoint [Amigo]  mitotic cell cycle checkpoint
GOcell proliferation [Amigo]  cell proliferation
GOtransferase activity [Amigo]  transferase activity
GOnegative regulation of cell cycle [Amigo]  negative regulation of cell cycle
GOphosphoinositide-mediated signaling [Amigo]  phosphoinositide-mediated signaling
GOspindle midzone [Amigo]  spindle midzone
GOcell division [Amigo]  cell division
KEGGCell cycle
PubGeneBUB1B
TreeFamBUB1B
CTD701 [Comparative ToxicoGenomics Database]
Other databases
Probes
ProbeBUB1B Related clones (RZPD - Berlin)
PubMed
PubMed42 Pubmed reference(s) in LocusLink

Bibliography

Mutations of mitotic checkpoint genes in human cancers.
Cahill DP, Lengauer C, Yu J, Riggins GJ, Willson JK, Markowitz SD, Kinzler KW, Vogelstein B
Nature. 1998 ; 392 (6673) : 300-303.
PMID 9521327
 
Child with mosaic variegated aneuploidy and embryonal rhabdomyosarcoma.
Limwongse C, Schwartz S, Bocian M, Robin NH
American journal of medical genetics. 1999 ; 82 (1) : 20-24.
PMID 9916837
 
Variegated aneuploidy related to premature centromere division (PCD) is expressed in vivo and is a cancer-prone disease.
Plaja A, Vendrell T, Smeets D, Sarret E, Gili T, CatalˆƯ V, Mediano C, Scheres JM
American journal of medical genetics. 2001 ; 98 (3) : 216-223.
PMID 11169558
 
The spindle checkpoint, aneuploidy, and cancer.
Bharadwaj R, Yu H
Oncogene. 2004 ; 23 (11) : 2016-2027.
PMID 15021889
 
Constitutional aneuploidy and cancer predisposition caused by biallelic mutations in BUB1B.
Hanks S, Coleman K, Reid S, Plaja A, Firth H, Fitzpatrick D, Kidd A, Mˆ©hes K, Nash R, Robin N, Shannon N, Tolmie J, Swansbury J, Irrthum A, Douglas J, Rahman N
Nature genetics. 2004 ; 36 (11) : 1159-1161.
PMID 15475955
 
The human mitotic checkpoint protein BubR1 regulates chromosome-spindle attachments.
Lampson MA, Kapoor TM
Nature cell biology. 2005 ; 7 (1) : 93-98.
PMID 15592459
 
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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Contributor(s)

Written07-2005Sandra Hanks, Nazneen Rahman
Medical Genetics Section of Cancer Genetics, Brookes Lawley Building Institute of Cancer Research, 15 Cotswold Road, Sutton Surrey, SM2 5NG, UK

Citation

This paper should be referenced as such :
Hanks S, Rahman N . BUB1B (BUB1 budding uninhibited by benzimidazoles 1 homolog beta (yeast)). Atlas Genet Cytogenet Oncol Haematol. July 2005 .
URL : http://AtlasGeneticsOncology.org/Genes/BUB1BID854ch15q15.html

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jul 2 08:22:21 2008


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