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CBL (Cas-Br-M (murine) ecotropic retroviral transforming sequence)

Identity

Other namesCBL2
HGNC (Hugo) CBL
LocusID (NCBI) 867
Location 11q23-q25
Location_base_pair Starts at 119076986 and ends at 119178859 bp from pter ( according to hg19-Feb_2009)  [Mapping]
 
  CBL (11q23) - Courtesy Mariano Rocchi, Resources for Molecular Cytogenetics. Laboratories willing to validate the probes are welcome : contact rocchi@biologia.uniba.it

DNA/RNA

Transcription 10.5 kb; 2718 bp open reading frame

Protein

Description 906 amino acids; 115 kDa; the evolutionarily conserved amino-terminal region of CBL is composed of three interacting domains: a four-helix bundle (4H), an EF-hand calcium binding domain, and a divergent SH2 domain; the three domains together form an integrated phosphoprotein-recognition module; this aminoterminal region is followed by a central Ring finger with a Cys3HisCys4 motif and a carboxy-terminal region with multiple proline-rich sequences, a putative leucine zipper and several potential tyrosine phosphorylation sites
Expression ubiquitous but predominant in hematopoietic cells
Localisation cytoplasmic; cellular activation induces translocation of CBL to the plasma membrane or cytoskeleton
Function CBL has been shown to have a negative regulatory activity in protein tyrosine kinase-mediated signaling pathways; CBL overexpresion inhibits cell growth resulting from activation of the EGF and PDGF receptors (EGFR, PDGFRa, PDFFRb) and enhances ubiquitination and degradation of these receptors; CBL also negatively regulates the tyrosine phosphorylation of ZAP70 substrates in T cells

Mutations

Germinal the fragile site FRA11B has been localized to a stretch of CCG trinucleotides found in the 5' part of the CBL gene and has been involved in the pathogenesis of a proportion of inherited Jacobsen syndroms (OMIM 147791) which have a del(11)(q23qter) telomeric of an expansion of the stretch of CCG tripletsSOMATIC in 9% of the genetically unstable sporadic gastrointestinal tumors, an extension of an ATG trinucleotide repeat with no translation shift was detected in the coding region of CBL; this alteration was not present in cancers without the mutator phenotype

Implicated in

Entity gastrointestinal tumors (see above)
  

External links

Nomenclature
HGNC (Hugo)CBL   1541
Entrez_Gene (NCBI)CBL  867  Cbl proto-oncogene, E3 ubiquitin protein ligase
Cards
AtlasCBLID171
GeneCards (Weizmann)CBL
Ensembl (Hinxton)ENSG00000110395 [Gene_View]  chr11:119076986-119178859 [Contig_View]  CBL [Vega]
AceView (NCBI)CBL
Genatlas (Paris)CBL
euGene (Indiana)867
SOURCE (Stanford)NM_005188
Genomic and cartography
GoldenPath (UCSC)CBL  -     chr11:119076986-119178859 +  11q23.3   [Description]    (hg19-Feb_2009)
EnsemblCBL - 11q23.3 [CytoView]
Mapping of homologs : NCBICBL [Mapview]
OMIM165360   613563   
Gene and transcription
Genbank (Entrez)AA806454 AK092300 AL832396 BC132733 BC136463
RefSeq transcript (SRS)NM_005188
RefSeq transcript (Entrez)NM_005188
RefSeq genomic (SRS)AC_000143 NC_000011 NG_016808 NT_033899 NW_001838042
RefSeq genomic (Entrez)AC_000143 NC_000011 NG_016808 NT_033899 NW_001838042
Consensus coding sequences : CCDS (NCBI)CBL
Cluster EST : UnigeneHs.504096 [ SRS ] Hs.504096 [ NCBI ]
Alternative Splicing : Fast-db (Paris)14496
Alternative Splicing GalleryENSG00000110395
Gene ExpressionCBL [ NCBI-GEO ]   CBL [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP22681 (SRS) P22681 (Uniprot)
With graphics : InterProP22681
Splice isoforms : SwissVarP22681(Swissvar)
Domaine pattern : Prosite (SRS)CBL_PTB (PS51506)    UBA (PS50030)    ZF_RING_1 (PS00518)    ZF_RING_2 (PS50089)   
Domaine pattern : Prosite (Expaxy)CBL_PTB (PS51506)    UBA (PS50030)    ZF_RING_1 (PS00518)    ZF_RING_2 (PS50089)   
Domains : Interpro (SRS)Adaptor_Cbl    Adaptor_Cbl_EF_hand-like    Adaptor_Cbl_N_hlx    Adaptor_Cbl_SH2-like    Cbl_PTB    EF-hand-like_dom    SH2    UBA-like    UBA/transl_elong_EF1B_N    UBA/transl_elong_EF1B_N_euk    Znf_C3HC4_RING-type    Znf_RING    Znf_RING/FYVE/PHD    Znf_RING_CS   
Domains : Interpro (EBI)Adaptor_Cbl    Adaptor_Cbl_EF_hand-like    Adaptor_Cbl_N_hlx    Adaptor_Cbl_SH2-like    Cbl_PTB    EF-hand-like_dom    SH2    UBA-like    UBA/transl_elong_EF1B_N    UBA/transl_elong_EF1B_N_euk    Znf_C3HC4_RING-type    Znf_RING    Znf_RING/FYVE/PHD    Znf_RING_CS   
Related proteins : CluSTrP22681
Domain families : Pfam (SRS)Cbl_N (PF02262)    Cbl_N2 (PF02761)    Cbl_N3 (PF02762)    UBA (PF00627)    zf-C3HC4 (PF00097)   
Domain families : Pfam (Sanger)Cbl_N (PF02262)    Cbl_N2 (PF02761)    Cbl_N3 (PF02762)    UBA (PF00627)    zf-C3HC4 (PF00097)   
Domain families : Pfam (NCBI)pfam02262    pfam02761    pfam02762    pfam00627    pfam00097   
Domain families : Smart (EMBL)RING (SM00184)  UBA (SM00165)  
Blocks (Seattle)P22681
PDB (SRS)1B47    1FBV    1YVH    2CBL    2JUJ    2K4D    2OO9    2Y1M    2Y1N    3BUM    3BUN    3BUO    3BUW    3BUX    3OB1    3OB2    3PLF    4A49    4A4B    4A4C   
PDB (PDBSum)1B47    1FBV    1YVH    2CBL    2JUJ    2K4D    2OO9    2Y1M    2Y1N    3BUM    3BUN    3BUO    3BUW    3BUX    3OB1    3OB2    3PLF    4A49    4A4B    4A4C   
PDB (IMB)1B47    1FBV    1YVH    2CBL    2JUJ    2K4D    2OO9    2Y1M    2Y1N    3BUM    3BUN    3BUO    3BUW    3BUX    3OB1    3OB2    3PLF    4A49    4A4B    4A4C   
PDB (RSDB)1B47    1FBV    1YVH    2CBL    2JUJ    2K4D    2OO9    2Y1M    2Y1N    3BUM    3BUN    3BUO    3BUW    3BUX    3OB1    3OB2    3PLF    4A49    4A4B    4A4C   
Human Protein AtlasENSG00000110395
HPRD01320
IPIIPI00027269   
Protein Interaction databases
DIP (DOE-UCLA)P22681
IntAct (EBI)P22681
FunCoupENSG00000110395
REACTOMECBL
BioGRIDCBL
InParanoidP22681
Interologous Interaction database P22681
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)CBL
SNP (GeneSNP Utah)CBL
SNP : HGBaseCBL
Genetic variants : HAPMAPCBL
Cancer Gene: CensusCBL 
Somatic Mutations in Cancer : COSMICCBL 
CONAN: Copy Number AnalysisCBL 
Translocation Breakpoints in Cancer : TICdbCBL 
Mutations and Diseases : HGMDCBL
OMIM165360    613563   
GENETests165360    613563   
Disease Genetic AssociationCBL
Huge Navigator CBL [HugePedia]  CBL [HugeCancerGEM]
Genomic VariantsCBL
snp3D : Map Gene to Disease867
General knowledge
Homologs : HomoloGeneCBL
Homology/Alignments : Family Browser (UCSC)CBL
Phylogenetic Trees/Animal Genes : TreeFamCBL
Catalytic activity : Enzyme6.3.2.- [ Enzyme-Expasy ]   6.3.2.- [ Enzyme-SRS ]   6.3.2.- [ IntEnz-EBI ]   6.3.2.- [ BRENDA ]   6.3.2.- [ KEGG ]   
Chemical/Protein Interactions : CTD867
Chemical/Pharm GKB GenePA26115
Clinical trialCBL
Cancer Resource (Charite)ENSG00000110395
Ontology : AmiGOphosphotyrosine binding  sequence-specific DNA binding transcription factor activity  ubiquitin-protein ligase activity  signal transducer activity  calcium ion binding  protein binding  nucleus  cytoplasm  cytosol  plasma membrane  plasma membrane  regulation of transcription, DNA-dependent  cell surface receptor signaling pathway  epidermal growth factor receptor signaling pathway  zinc ion binding  fibroblast growth factor receptor signaling pathway  positive regulation of phosphatidylinositol 3-kinase cascade  protein ubiquitination  flotillin complex  ligase activity  SH3 domain binding  regulation of signaling  negative regulation of epidermal growth factor receptor signaling pathway  negative regulation of apoptotic process  ephrin receptor binding  positive regulation of receptor-mediated endocytosis  
Ontology : EGO-EBIphosphotyrosine binding  sequence-specific DNA binding transcription factor activity  ubiquitin-protein ligase activity  signal transducer activity  calcium ion binding  protein binding  nucleus  cytoplasm  cytosol  plasma membrane  plasma membrane  regulation of transcription, DNA-dependent  cell surface receptor signaling pathway  epidermal growth factor receptor signaling pathway  zinc ion binding  fibroblast growth factor receptor signaling pathway  positive regulation of phosphatidylinositol 3-kinase cascade  protein ubiquitination  flotillin complex  ligase activity  SH3 domain binding  regulation of signaling  negative regulation of epidermal growth factor receptor signaling pathway  negative regulation of apoptotic process  ephrin receptor binding  positive regulation of receptor-mediated endocytosis  
Pathways : BIOCARTACBL mediated ligand-induced downregulation of EGF receptors [Genes]    Sprouty regulation of tyrosine kinase signals [Genes]    IL-2 Receptor Beta Chain in T cell Activation [Genes]   
Pathways : KEGGInsulin signaling pathwayJak-STAT signaling pathwayT cell receptor signaling pathway
Other databases
Probes
ProbeCancer Cytogenetics (Bari)
Probes : ImagenesCBL Related clones (RZPD - Berlin)
Litterature
PubMed338 Pubmed reference(s) in Entrez
PubGeneCBL
iHOPCBL

Bibliography

v-cbl, an oncogene from a dual-recombinant murine retrovirus that induces early B-lineage lymphomas.
Langdon WY, Hartley JW, Klinken SP, Ruscetti SK, Morse HC 3rd
Proceedings of the National Academy of Sciences of the United States of America. 1989 ; 86 (4) : 1168-1172.
PMID 2784003
 
The sequences of the human and mouse c-cbl proto-oncogenes show v-cbl was generated by a large truncation encompassing a proline-rich domain and a leucine zipper-like motif.
Blake TJ, Shapiro M, Morse HC 3rd, Langdon WY
Oncogene. 1991 ; 6 (4) : 653-657.
PMID 2030914
 
Association of a chromosome deletion syndrome with a fragile site within the proto-oncogene CBL2.
Jones C, Penny L, Mattina T, Yu S, Baker E, Voullaire L, Langdon WY, Sutherland GR, Richards RI, Tunnacliffe A
Nature. 1995 ; 376 (6536) : 145-149.
PMID 7603564
 
The coding region of the Bloom syndrome BLM gene and of the CBL proto-oncogene is mutated in genetically unstable sporadic gastrointestinal tumors.
Calin G, Herlea V, Barbanti-Brodano G, Negrini M
Cancer research. 1998 ; 58 (17) : 3777-3781.
PMID 9731483
 
Cbl: complex formation and functional implications.
Liu YC, Altman A
Cellular signalling. 1998 ; 10 (6) : 377-385.
PMID 9720760
 
Cbl: complex formation and functional implications.
Liu YC, Altman A
Cellular signalling. 1998 ; 10 (6) : 377-385.
PMID 9720760
 
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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Contributor(s)

Written09-1999Olivier Rosnet

Citation

This paper should be referenced as such :
Rosnet O . CBL (Cas-Br-M (murine) ecotropic retroviral transforming sequence). Atlas Genet Cytogenet Oncol Haematol. September 1999 .
URL : http://AtlasGeneticsOncology.org/Genes/CBLID171.html

This paper is referenced by INIST as such :
http://documents.irevues.inist.fr/bitstream/2042/37531/1/09-1999-CBLID171.pdf   [ Bibliographic record ]

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indexed on : Sat Apr 28 15:05:05 CEST 2012

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