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EEF1A2 (eukaryotic translation elongation factor 1 alpha 2)

Identity

Other namesEEF1AL
EF-1-alpha-2
EF1A
HS1
STN
eEF1A-2
HGNC (Hugo) EEF1A2
Location 20q13.3
Location_base_pair Starts at 61589810 and ends at 61600949 bp from pter ( according to hg18-Mar_2006)  [Mapping]

DNA/RNA

Description 8 exons and 7 introns.
Transcription 5 alternatives for transcript splicing.

Protein

 
Description 50kDa; 463 amino acids contains tRNA binding sites, GTP binding and hydrolysis sites and putative actin binding sites (see figure above).
Expression In mice and humans, eEF1A2 is expressed only in normal tissues of the brain, heart and skeletal muscle. Expression is found in tumours of the breast, lung and ovary.
Localisation Diffusely cytoplasmic and nuclear.
Function This protein is an isoform of the alpha subunit of the elongation factor-1 complex. There are two known isoforms of protein elongation factor eEF1A (eEF1A1 and eEF1A2). eEF1A proteins are GTP-binding proteins that interact with amino-acylated tRNA and recruit them to the ribosome during the elongation phase of protein translation. In addition, eEF1A2 binds to and stimulates the lipid kinase activity of phosphatidylinositol 4-kinase beta, the enzyme that catalyzes the generation of phosphatidylinositol 4-phosphate from phosphatidylinositol. eEF1A2 also activates the Akt serine/threonine kinase and can stimulate actin remodeling and increase the rate of cell invasion and migration in vitro.
Homology EEF1A2 is highly homologous to the EEF1A1. EEF1A2 and EEF1A1 share greater than 90% DNA sequence and amino acid identity. The GTP binding and hydrolysis domains also have homology to the Ras GTPase.

Mutations

Note Inactivation of mouse EEF1A2 leads to immunodeficiency, neuromuscular abnormalities and death by 30 days of age.

Implicated in

Entity Tumorigenesis
Disease Breast, lung and ovarian cancer. EEF1A2 overexpression is found in approximatively 60% of breast, 30% of ovary and 40% of lung tumours.
Prognosis High eEF1A2 protein expression is associated with good prognosis in both breast and ovarian cancer. High eEF1A2 protein expression predicts poor prognosis in lung cancer.
Cytogenetics Fluorescence in situ hybridization (FISH), showed high copy numbers of EEF1A2 in 25% ovarian tumors.
Oncogenesis The eEF1A2 gene is transforming and increases the in-vitro growth rate of mouse and human cells grown in-vitro and also enhances their tumorigenicity in mouse xenograft models.
  

External links

Nomenclature
HGNC (Hugo)EEF1A2   3192
Entrez_Gene (NCBI)EEF1A2  1917  eukaryotic translation elongation factor 1 alpha 2
Cards
AtlasEEF1A2ID40408ch20q13
GeneCards (Weizmann)EEF1A2
Ensembl (Hinxton)ENSG00000101210 [Gene_View]  EEF1A2 [Vega]
AceView (NCBI)EEF1A2
Genatlas (Paris)EEF1A2
euGene (Indiana)1917
SOURCE (Stanford)NM_001958
Genomic and cartography
GoldenPath (UCSC)EEF1A2  -  20q13.3   chr20:61589810-61600949 -  20q13.3   [Description]    (hg18-Mar_2006)
EnsemblEEF1A2 - 20q13.3 [CytoView]
Mapping of homologs : NCBIEEF1A2 [Mapview]
OMIM602959   
Gene and transcription
Gene : Genbank (Entrez)AB209064 AB451389 AK123690 AK307536 BC000432
Reference sequence (RefSeq transcript) :SRSNM_001958
Reference transcript : EntrezNM_001958
RefSeq genomic : SRSAC_000063 AC_000152 NC_000020 NT_011333 NW_001838671 NW_927339
RefSeq genomic : EntrezAC_000063 AC_000152 NC_000020 NT_011333 NW_001838671 NW_927339
Consensus coding sequences : CCDS NCBIEEF1A2
Cluster EST : UnigeneHs.433839 [ SRS ] Hs.433839 [ NCBI ]
Alternative Splicing : Fast-db (Paris)15061
Protein : pattern, domain, 3D structure
Protein : UniProt/SwissProtQ05639 (SRS) Q05639 (Expasy) Q05639 (Uniprot)
With graphics : InterProQ05639
Splice isoforms : VarSplice FASTAQ05639(VarSplice FASTA)
Domaine pattern : Prosite (SRS)EFACTOR_GTP (PS00301)   
Domain pattern : Prosite (Expaxy)EFACTOR_GTP (PS00301)   
Domains : Interpro (SRS)ProtSyn_GTP_bd    Transl_elong_EF1A_euk/arc    Transl_elong_EFTu/EF1A_2    Transl_elong_EFTu/EF1A_C   
Domains : Interpro (EBI)ProtSyn_GTP_bd    Transl_elong_EF1A_euk/arc    Transl_elong_EFTu/EF1A_2    Transl_elong_EFTu/EF1A_C   
Related proteins : CluSTrQ05639
Domain families : Pfam SRSGTP_EFTU (PF00009)    GTP_EFTU_D2 (PF03144)    GTP_EFTU_D3 (PF03143)   
Domain families : Pfam SangerGTP_EFTU (PF00009)    GTP_EFTU_D2 (PF03144)    GTP_EFTU_D3 (PF03143)   
Domain families : Pfam NCBIpfam00009    pfam03144    pfam03143   
Blocks (Seattle)Q05639
Crystal structure of protein : PDB SRS3C5J   
Crystal structure of protein : PDBSum3C5J   
Crystal structure of protein : IMB3C5J   
Crystal structure of protein : PDB RSDB3C5J   
HPRD04265
Protein Interaction databases
DIP (DOE-UCLA)Q05639
IntAct (EBI)Q05639
Polymorphism : SNP, mutations, diseases
Single Nucleotide Polymorphism (SNP) : dbSNP NCBIEEF1A2
SNP : GeneSNP UtahEEF1A2
SNP : HGBaseEEF1A2
Genetic variants : HAPMAPEEF1A2
Mutations and Diseases : HGMDEEF1A2
Hereditary diseases : OMIM602959   
Hereditary diseases : GENETests602959   
Diseases : Genetic AssociationEEF1A2
General knowledge
Homologs : HomoloGeneEEF1A2
Homology/Alignments : Family Browser UCSCEEF1A2
Phylogenetic Trees/Animal Genes : TreeFamEEF1A2
Chemical/Protein Interactions : CTD1917
Keywords Ontology : AmiGOnucleotide binding  translation elongation factor activity  GTPase activity  protein binding  GTP binding  nucleus  cytoplasm  eukaryotic translation elongation factor 1 complex  translational elongation  anti-apoptosis  
Keywords Ontology : EGO-EBInucleotide binding  translation elongation factor activity  GTPase activity  protein binding  GTP binding  nucleus  cytoplasm  eukaryotic translation elongation factor 1 complex  translational elongation  anti-apoptosis  
Pathways : BIOCARTA
Pathways : KEGG
Other databases
Probes
Probes : ImagenesEEF1A2 Related clones (RZPD - Berlin)
Literature
PubMed27 Pubmed reference(s) in Entrez
PubGeneEEF1A2

Bibliography

Protein elongation factor EEF1A2 is a putative oncogene in ovarian cancer.
Anand N, Murthy S, Amann G, Wernick M, Porter LA, Cukier IH, Collins C, Gray JW, Diebold J, Demetrick DJ, Lee JM.
Nat Genet. 2002 Jul;31(3):301-5. Epub 2002 Jun 10.
PMID 12053177
 
Translation elongation factor eEF1A2 is a potential oncoprotein that is overexpressed in two-thirds of breast tumours.
Tomlinson VA, Newbery HJ, Wray NR, Jackson J, Larionov A, Miller WR, Dixon JM, Abbott CM.
BMC Cancer. 2005 Sep 12;5:113.
PMID 16156888
 
Expression of eEF1A2 is associated with clear cell histology in ovarian carcinomas: overexpression of the gene is not dependent on modifications at the EEF1A2 locus.
Tomlinson VA, Newbery HJ, Bergmann JH, Boyd J, Scott D, Wray NR, Sellar GC, Gabra H, Graham A, Williams AR, Abbott CM.
Br J Cancer. 2007 May 21;96(10):1613-20. Epub 2007 Apr 17.
PMID 17437010
 
eEF1A2 activates Akt and stimulates Akt-dependent actin remodeling, invasion and migration.
Amiri A, Noei F, Jeganathan S, Kulkarni G, Pinke DE, Lee JM.
Oncogene. 2007 May 10;26(21):3027-40. Epub 2006 Nov 20.
PMID 17130842
 
Binding of elongation factor eEF1A2 to phosphatidylinositol 4-kinase beta stimulates lipid kinase activity and phosphatidylinositol 4-phosphate generation.
Jeganathan S, Lee JM.
J Biol Chem. 2007 Jan 5;282(1):372-80. Epub 2006 Nov 6.
PMID 17088255
 
Expression of protein elongation factor eEF1A2 predicts favorable outcome in breast cancer.
Kulkarni G, Turbin DA, Amiri A, Jeganathan S, Andrade-Navarro MA, Wu TD, Huntsman DG, Lee JM.
Breast Cancer Res Treat. 2007 Mar;102(1):31-41. Epub 2006 Aug 9.
PMID 16897428
 
The prognostic significance of elongation factor eEF1A2 in ovarian cancer.
Pinke DE, Kalloger SE, Francetic T, Huntsman DG, Lee JM.
Gynecol Oncol. 2008 Mar;108(3):561-8. Epub 2007 Dec 31.
PMID 18164751
 
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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Contributor(s)

Written04-2008Sanna Noubir, Jonathan M Lee
Department of Biochemistry, Microbiology, Immunology, University of Ottawa, 451 Smyth Road, Ottawa, Ontario, Canada K1H 8M5.

Citation

This paper should be referenced as such :
Noubir S, Lee JM . EEF1A2 (eukaryotic translation elongation factor 1 alpha 2). Atlas Genet Cytogenet Oncol Haematol. April 2008 .
URL : http://AtlasGeneticsOncology.org/Genes/EEF1A2ID40408ch20q13.html

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indexed on : Sat Jun 27 16:36:47 CEST 2009

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