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AACSP1 (acetoacetyl-CoA synthetase pseudogene 1)

Identity

Alias_namesAACSL
acetoacetyl-CoA synthetase-like
Other alias
HGNC (Hugo) AACSP1
LocusID (NCBI) 729522
Atlas_Id 60008
Location 5q35.3  [Link to chromosome band 5q35]
Location_base_pair Starts at 178764861 and ends at 178818435 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)AACSP1   18226
Cards
Entrez_Gene (NCBI)AACSP1  729522  acetoacetyl-CoA synthetase pseudogene 1
AliasesAACSL
GeneCards (Weizmann)AACSP1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr5:178764861-178818435 [Contig_View]  AACSP1 [Vega]
TCGA cBioPortalAACSP1
AceView (NCBI)AACSP1
Genatlas (Paris)AACSP1
WikiGenes729522
SOURCE (Princeton)AACSP1
Genetics Home Reference (NIH)AACSP1
Genomic and cartography
GoldenPath hg38 (UCSC)AACSP1  -     chr5:178764861-178818435 -  5q35.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)AACSP1  -     5q35.3   [Description]    (hg19-Feb_2009)
EnsemblAACSP1 - 5q35.3 [CytoView hg19]  AACSP1 - 5q35.3 [CytoView hg38]
Mapping of homologs : NCBIAACSP1 [Mapview hg19]  AACSP1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA954365 BC024222 BC140764 BC144474 DR008193
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)AACSP1
Cluster EST : UnigeneHs.382790 [ NCBI ]
CGAP (NCI)Hs.382790
Gene ExpressionAACSP1 [ NCBI-GEO ]   AACSP1 [ EBI - ARRAY_EXPRESS ]   AACSP1 [ SEEK ]   AACSP1 [ MEM ]
Gene Expression Viewer (FireBrowse)AACSP1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)729522
GTEX Portal (Tissue expression)AACSP1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)AACSP1
DMDM Disease mutations729522
Blocks (Seattle)AACSP1
IPIIPI00923489   
Protein Interaction databases
BioGRIDAACSP1
STRING (EMBL)AACSP1
ZODIACAACSP1
Ontologies - Pathways
Huge Navigator AACSP1 [HugePedia]
snp3D : Map Gene to Disease729522
BioCentury BCIQAACSP1
ClinGenAACSP1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD729522
Chemical/Pharm GKB GenePA134883395
Clinical trialAACSP1
Miscellaneous
canSAR (ICR)AACSP1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineAACSP1
EVEXAACSP1
GoPubMedAACSP1
iHOPAACSP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri May 19 10:58:49 CEST 2017

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