Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

AADACL2 (arylacetamide deacetylase like 2)

Identity

Alias_symbol (synonym)MGC72001
Other alias-
HGNC (Hugo) AADACL2
LocusID (NCBI) 344752
Atlas_Id 54095
Location 3q25.1  [Link to chromosome band 3q25]
Location_base_pair Starts at 151733916 and ends at 151757768 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ENSA (1q21.3) / AADACL2 (3q25.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)AADACL2   24427
Cards
Entrez_Gene (NCBI)AADACL2  344752  arylacetamide deacetylase like 2
Aliases
GeneCards (Weizmann)AADACL2
Ensembl hg19 (Hinxton)ENSG00000197953 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000197953 [Gene_View]  chr3:151733916-151757768 [Contig_View]  AADACL2 [Vega]
ICGC DataPortalENSG00000197953
TCGA cBioPortalAADACL2
AceView (NCBI)AADACL2
Genatlas (Paris)AADACL2
WikiGenes344752
SOURCE (Princeton)AADACL2
Genetics Home Reference (NIH)AADACL2
Genomic and cartography
GoldenPath hg38 (UCSC)AADACL2  -     chr3:151733916-151757768 +  3q25.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)AADACL2  -     3q25.1   [Description]    (hg19-Feb_2009)
EnsemblAADACL2 - 3q25.1 [CytoView hg19]  AADACL2 - 3q25.1 [CytoView hg38]
Mapping of homologs : NCBIAADACL2 [Mapview hg19]  AADACL2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC065724 BX118873 BX647585 CU449274 HQ447542
RefSeq transcript (Entrez)NM_207365
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)AADACL2
Cluster EST : UnigeneHs.144710 [ NCBI ]
CGAP (NCI)Hs.144710
Alternative Splicing GalleryENSG00000197953
Gene ExpressionAADACL2 [ NCBI-GEO ]   AADACL2 [ EBI - ARRAY_EXPRESS ]   AADACL2 [ SEEK ]   AADACL2 [ MEM ]
Gene Expression Viewer (FireBrowse)AADACL2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)344752
GTEX Portal (Tissue expression)AADACL2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6P093   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6P093  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6P093
Splice isoforms : SwissVarQ6P093
Catalytic activity : Enzyme3.1.1.- [ Enzyme-Expasy ]   3.1.1.-3.1.1.- [ IntEnz-EBI ]   3.1.1.- [ BRENDA ]   3.1.1.- [ KEGG ]   
PhosPhoSitePlusQ6P093
Domaine pattern : Prosite (Expaxy)LIPASE_GDXG_SER (PS01174)   
Domains : Interpro (EBI)AB_hydrolase    AB_hydrolase_3    Arylacetamide_deacetylase    Lipase_GDXG_put_SER_AS   
Domain families : Pfam (Sanger)Abhydrolase_3 (PF07859)   
Domain families : Pfam (NCBI)pfam07859   
Conserved Domain (NCBI)AADACL2
DMDM Disease mutations344752
Blocks (Seattle)AADACL2
SuperfamilyQ6P093
Human Protein AtlasENSG00000197953
Peptide AtlasQ6P093
HPRD14705
IPIIPI00410438   IPI00954047   IPI01024724   
Protein Interaction databases
DIP (DOE-UCLA)Q6P093
IntAct (EBI)Q6P093
FunCoupENSG00000197953
BioGRIDAADACL2
STRING (EMBL)AADACL2
ZODIACAADACL2
Ontologies - Pathways
QuickGOQ6P093
Ontology : AmiGOextracellular region  catabolic process  integral component of membrane  hydrolase activity  carboxylic ester hydrolase activity  
Ontology : EGO-EBIextracellular region  catabolic process  integral component of membrane  hydrolase activity  carboxylic ester hydrolase activity  
NDEx NetworkAADACL2
Atlas of Cancer Signalling NetworkAADACL2
Wikipedia pathwaysAADACL2
Orthology - Evolution
OrthoDB344752
GeneTree (enSembl)ENSG00000197953
Phylogenetic Trees/Animal Genes : TreeFamAADACL2
HOVERGENQ6P093
HOGENOMQ6P093
Homologs : HomoloGeneAADACL2
Homology/Alignments : Family Browser (UCSC)AADACL2
Gene fusions - Rearrangements
Fusion : MitelmanENSA/AADACL2 [1q21.3/3q25.1]  [t(1;3)(q21;q25)]  
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerAADACL2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)AADACL2
dbVarAADACL2
ClinVarAADACL2
1000_GenomesAADACL2 
Exome Variant ServerAADACL2
ExAC (Exome Aggregation Consortium)AADACL2 (select the gene name)
Genetic variants : HAPMAP344752
Genomic Variants (DGV)AADACL2 [DGVbeta]
DECIPHERAADACL2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisAADACL2 
Mutations
ICGC Data PortalAADACL2 
TCGA Data PortalAADACL2 
Broad Tumor PortalAADACL2
OASIS PortalAADACL2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICAADACL2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDAADACL2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch AADACL2
DgiDB (Drug Gene Interaction Database)AADACL2
DoCM (Curated mutations)AADACL2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)AADACL2 (select a term)
intoGenAADACL2
Cancer3DAADACL2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenAADACL2
Genetic Testing Registry AADACL2
NextProtQ6P093 [Medical]
TSGene344752
GENETestsAADACL2
Target ValidationAADACL2
Huge Navigator AADACL2 [HugePedia]
snp3D : Map Gene to Disease344752
BioCentury BCIQAADACL2
ClinGenAADACL2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD344752
Chemical/Pharm GKB GenePA142670463
Clinical trialAADACL2
Miscellaneous
canSAR (ICR)AADACL2 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineAADACL2
EVEXAADACL2
GoPubMedAADACL2
iHOPAADACL2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 25 18:55:36 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.