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AADACL4 (arylacetamide deacetylase like 4)

Identity

Alias_symbol (synonym)OTTHUMG00000001889
Other alias-
HGNC (Hugo) AADACL4
LocusID (NCBI) 343066
Atlas_Id 60011
Location 1p36.21  [Link to chromosome band 1p36]
Location_base_pair Starts at 12644547 and ends at 12667086 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)AADACL4   32038
Cards
Entrez_Gene (NCBI)AADACL4  343066  arylacetamide deacetylase like 4
Aliases
GeneCards (Weizmann)AADACL4
Ensembl hg19 (Hinxton)ENSG00000204518 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000204518 [Gene_View]  chr1:12644547-12667086 [Contig_View]  AADACL4 [Vega]
ICGC DataPortalENSG00000204518
TCGA cBioPortalAADACL4
AceView (NCBI)AADACL4
Genatlas (Paris)AADACL4
WikiGenes343066
SOURCE (Princeton)AADACL4
Genetics Home Reference (NIH)AADACL4
Genomic and cartography
GoldenPath hg38 (UCSC)AADACL4  -     chr1:12644547-12667086 +  1p36.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)AADACL4  -     1p36.21   [Description]    (hg19-Feb_2009)
EnsemblAADACL4 - 1p36.21 [CytoView hg19]  AADACL4 - 1p36.21 [CytoView hg38]
Mapping of homologs : NCBIAADACL4 [Mapview hg19]  AADACL4 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001013630
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)AADACL4
Cluster EST : UnigeneHs.209954 [ NCBI ]
CGAP (NCI)Hs.209954
Alternative Splicing GalleryENSG00000204518
Gene ExpressionAADACL4 [ NCBI-GEO ]   AADACL4 [ EBI - ARRAY_EXPRESS ]   AADACL4 [ SEEK ]   AADACL4 [ MEM ]
Gene Expression Viewer (FireBrowse)AADACL4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)343066
GTEX Portal (Tissue expression)AADACL4
Human Protein AtlasENSG00000204518-AADACL4 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5VUY2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5VUY2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5VUY2
Splice isoforms : SwissVarQ5VUY2
PhosPhoSitePlusQ5VUY2
Domains : Interpro (EBI)AB_hydrolase    AB_hydrolase_3    Arylacetamide_deacetylase   
Domain families : Pfam (Sanger)Abhydrolase_3 (PF07859)   
Domain families : Pfam (NCBI)pfam07859   
Conserved Domain (NCBI)AADACL4
DMDM Disease mutations343066
Blocks (Seattle)AADACL4
SuperfamilyQ5VUY2
Human Protein Atlas [tissue]ENSG00000204518-AADACL4 [tissue]
Peptide AtlasQ5VUY2
HPRD15402
IPIIPI00179839   
Protein Interaction databases
DIP (DOE-UCLA)Q5VUY2
IntAct (EBI)Q5VUY2
FunCoupENSG00000204518
BioGRIDAADACL4
STRING (EMBL)AADACL4
ZODIACAADACL4
Ontologies - Pathways
QuickGOQ5VUY2
Ontology : AmiGOcatabolic process  integral component of membrane  hydrolase activity  carboxylic ester hydrolase activity  
Ontology : EGO-EBIcatabolic process  integral component of membrane  hydrolase activity  carboxylic ester hydrolase activity  
NDEx NetworkAADACL4
Atlas of Cancer Signalling NetworkAADACL4
Wikipedia pathwaysAADACL4
Orthology - Evolution
OrthoDB343066
GeneTree (enSembl)ENSG00000204518
Phylogenetic Trees/Animal Genes : TreeFamAADACL4
HOVERGENQ5VUY2
HOGENOMQ5VUY2
Homologs : HomoloGeneAADACL4
Homology/Alignments : Family Browser (UCSC)AADACL4
Gene fusions - Rearrangements
Tumor Fusion PortalAADACL4
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerAADACL4 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)AADACL4
dbVarAADACL4
ClinVarAADACL4
1000_GenomesAADACL4 
Exome Variant ServerAADACL4
ExAC (Exome Aggregation Consortium)ENSG00000204518
GNOMAD BrowserENSG00000204518
Genetic variants : HAPMAP343066
Genomic Variants (DGV)AADACL4 [DGVbeta]
DECIPHERAADACL4 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisAADACL4 
Mutations
ICGC Data PortalAADACL4 
TCGA Data PortalAADACL4 
Broad Tumor PortalAADACL4
OASIS PortalAADACL4 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICAADACL4  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDAADACL4
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch AADACL4
DgiDB (Drug Gene Interaction Database)AADACL4
DoCM (Curated mutations)AADACL4 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)AADACL4 (select a term)
intoGenAADACL4
Cancer3DAADACL4(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETAADACL4
MedgenAADACL4
Genetic Testing Registry AADACL4
NextProtQ5VUY2 [Medical]
TSGene343066
GENETestsAADACL4
Target ValidationAADACL4
Huge Navigator AADACL4 [HugePedia]
snp3D : Map Gene to Disease343066
BioCentury BCIQAADACL4
ClinGenAADACL4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD343066
Chemical/Pharm GKB GenePA145147537
Clinical trialAADACL4
Miscellaneous
canSAR (ICR)AADACL4 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineAADACL4
EVEXAADACL4
GoPubMedAADACL4
iHOPAADACL4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 12:59:06 CET 2017

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