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AARD (alanine and arginine rich domain containing protein)

Identity

Alias_namesC8orf85
chromosome 8 open reading frame 85
Alias_symbol (synonym)LOC441376
Other alias
HGNC (Hugo) AARD
LocusID (NCBI) 441376
Atlas_Id 60018
Location 8q24.11  [Link to chromosome band 8q24]
Location_base_pair Starts at 117950464 and ends at 117956239 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
RIC1 (9p24.1) / AARD (8q24.11)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)AARD   33842
Cards
Entrez_Gene (NCBI)AARD  441376  alanine and arginine rich domain containing protein
AliasesC8orf85
GeneCards (Weizmann)AARD
Ensembl hg19 (Hinxton) [Gene_View]  chr8:117950464-117956239 [Contig_View]  AARD [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr8:117950464-117956239 [Contig_View]  AARD [Vega]
TCGA cBioPortalAARD
AceView (NCBI)AARD
Genatlas (Paris)AARD
WikiGenes441376
SOURCE (Princeton)AARD
Genetics Home Reference (NIH)AARD
Genomic and cartography
GoldenPath hg19 (UCSC)AARD  -     chr8:117950464-117956239 +  8q24.11   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)AARD  -     8q24.11   [Description]    (hg38-Dec_2013)
EnsemblAARD - 8q24.11 [CytoView hg19]  AARD - 8q24.11 [CytoView hg38]
Mapping of homologs : NCBIAARD [Mapview hg19]  AARD [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB181519 BC140924 BC142621
RefSeq transcript (Entrez)NM_001025357
RefSeq genomic (Entrez)NC_000008 NC_018919 NT_008046 NW_004929340
Consensus coding sequences : CCDS (NCBI)AARD
Cluster EST : UnigeneHs.437551 [ NCBI ]
CGAP (NCI)Hs.437551
Gene ExpressionAARD [ NCBI-GEO ]   AARD [ EBI - ARRAY_EXPRESS ]   AARD [ SEEK ]   AARD [ MEM ]
Gene Expression Viewer (FireBrowse)AARD [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)441376
GTEX Portal (Tissue expression)AARD
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ4LEZ3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ4LEZ3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ4LEZ3
Splice isoforms : SwissVarQ4LEZ3
PhosPhoSitePlusQ4LEZ3
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)AARD
DMDM Disease mutations441376
Blocks (Seattle)AARD
SuperfamilyQ4LEZ3
Peptide AtlasQ4LEZ3
IPIIPI00455846   
Protein Interaction databases
DIP (DOE-UCLA)Q4LEZ3
IntAct (EBI)Q4LEZ3
BioGRIDAARD
STRING (EMBL)AARD
ZODIACAARD
Ontologies - Pathways
QuickGOQ4LEZ3
Ontology : AmiGOlung development  
Ontology : EGO-EBIlung development  
NDEx NetworkAARD
Atlas of Cancer Signalling NetworkAARD
Wikipedia pathwaysAARD
Orthology - Evolution
OrthoDB441376
Phylogenetic Trees/Animal Genes : TreeFamAARD
HOVERGENQ4LEZ3
HOGENOMQ4LEZ3
Homologs : HomoloGeneAARD
Homology/Alignments : Family Browser (UCSC)AARD
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerAARD [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)AARD
dbVarAARD
ClinVarAARD
1000_GenomesAARD 
Exome Variant ServerAARD
ExAC (Exome Aggregation Consortium)AARD (select the gene name)
Genetic variants : HAPMAP441376
Genomic Variants (DGV)AARD [DGVbeta]
DECIPHER (Syndromes)8:117950464-117956239  
CONAN: Copy Number AnalysisAARD 
Mutations
ICGC Data PortalAARD 
TCGA Data PortalAARD 
Broad Tumor PortalAARD
OASIS PortalAARD [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDAARD
BioMutasearch AARD
DgiDB (Drug Gene Interaction Database)AARD
DoCM (Curated mutations)AARD (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)AARD (select a term)
intoGenAARD
Cancer3DAARD(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenAARD
Genetic Testing Registry AARD
NextProtQ4LEZ3 [Medical]
TSGene441376
GENETestsAARD
Huge Navigator AARD [HugePedia]
snp3D : Map Gene to Disease441376
BioCentury BCIQAARD
ClinGenAARD
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD441376
Chemical/Pharm GKB GenePA164717502
Clinical trialAARD
Miscellaneous
canSAR (ICR)AARD (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineAARD
EVEXAARD
GoPubMedAARD
iHOPAARD
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 11:53:15 CET 2017

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