Atlas of Genetics and Cytogenetics in Oncology and Haematology


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AAVS1 (adeno-associated virus integration site 1)

Identity

Alias_symbol (synonym)AAV
Other alias
HGNC (Hugo) AAVS1
LocusID (NCBI) 17
Atlas_Id 535
Location 19q13|19q13-qter  [Link to chromosome band 19q13]
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)AAVS1   22
Cards
Entrez_Gene (NCBI)AAVS1  17  adeno-associated virus integration site 1
AliasesAAV
GeneCards (Weizmann)AAVS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  - [Contig_View]  AAVS1 [Vega]
TCGA cBioPortalAAVS1
AceView (NCBI)AAVS1
Genatlas (Paris)AAVS1
WikiGenes17
SOURCE (Princeton)AAVS1
Genetics Home Reference (NIH)AAVS1
Genomic and cartography
GoldenPath hg38 (UCSC)AAVS1  -  
GoldenPath hg19 (UCSC)AAVS1  -  
EnsemblAAVS1 - [CytoView hg19]  AAVS1 - [CytoView hg38]
Mapping of homologs : NCBIAAVS1 [Mapview hg19]  AAVS1 [Mapview hg38]
OMIM102699   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)AAVS1
Gene ExpressionAAVS1 [ NCBI-GEO ]   AAVS1 [ EBI - ARRAY_EXPRESS ]   AAVS1 [ SEEK ]   AAVS1 [ MEM ]
Gene Expression Viewer (FireBrowse)AAVS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)17
GTEX Portal (Tissue expression)AAVS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)AAVS1
DMDM Disease mutations17
Blocks (Seattle)AAVS1
Protein Interaction databases
BioGRIDAAVS1
STRING (EMBL)AAVS1
ZODIACAAVS1
Ontologies - Pathways
Huge Navigator AAVS1 [HugePedia]
snp3D : Map Gene to Disease17
BioCentury BCIQAAVS1
ClinGenAAVS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD17
Chemical/Pharm GKB GenePA24371
Clinical trialAAVS1
Miscellaneous
canSAR (ICR)AAVS1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineAAVS1
EVEXAAVS1
GoPubMedAAVS1
iHOPAAVS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 25 18:55:37 CEST 2017

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