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ABCA9-AS1 (ABCA9 antisense RNA 1)

Identity

Alias_namesABCA9 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) ABCA9-AS1
LocusID (NCBI) 104355297
Atlas_Id 76973
Location 17q24.2  [Link to chromosome band 17q24]
Location_base_pair Starts at 69004714 and ends at 69018323 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ABCA9-AS1   39983
Cards
Entrez_Gene (NCBI)ABCA9-AS1  104355297  ABCA9 antisense RNA 1
Aliases
GeneCards (Weizmann)ABCA9-AS1
Ensembl hg19 (Hinxton)ENSG00000231749 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000231749 [Gene_View]  chr17:69004714-69018323 [Contig_View]  ABCA9-AS1 [Vega]
ICGC DataPortalENSG00000231749
TCGA cBioPortalABCA9-AS1
AceView (NCBI)ABCA9-AS1
Genatlas (Paris)ABCA9-AS1
WikiGenes104355297
SOURCE (Princeton)ABCA9-AS1
Genetics Home Reference (NIH)ABCA9-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)ABCA9-AS1  -     chr17:69004714-69018323 +  17q24.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ABCA9-AS1  -     17q24.2   [Description]    (hg19-Feb_2009)
EnsemblABCA9-AS1 - 17q24.2 [CytoView hg19]  ABCA9-AS1 - 17q24.2 [CytoView hg38]
Mapping of homologs : NCBIABCA9-AS1 [Mapview hg19]  ABCA9-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)CB960713 CB961243 DA128020
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ABCA9-AS1
Cluster EST : UnigeneHs.569827 [ NCBI ]
CGAP (NCI)Hs.569827
Alternative Splicing GalleryENSG00000231749
Gene ExpressionABCA9-AS1 [ NCBI-GEO ]   ABCA9-AS1 [ EBI - ARRAY_EXPRESS ]   ABCA9-AS1 [ SEEK ]   ABCA9-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)ABCA9-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)104355297
GTEX Portal (Tissue expression)ABCA9-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ABCA9-AS1
DMDM Disease mutations104355297
Blocks (Seattle)ABCA9-AS1
Human Protein AtlasENSG00000231749
Protein Interaction databases
FunCoupENSG00000231749
BioGRIDABCA9-AS1
STRING (EMBL)ABCA9-AS1
ZODIACABCA9-AS1
Ontologies - Pathways
Huge Navigator ABCA9-AS1 [HugePedia]
snp3D : Map Gene to Disease104355297
BioCentury BCIQABCA9-AS1
ClinGenABCA9-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD104355297
Clinical trialABCA9-AS1
Miscellaneous
canSAR (ICR)ABCA9-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineABCA9-AS1
EVEXABCA9-AS1
GoPubMedABCA9-AS1
iHOPABCA9-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Sep 18 13:00:38 CEST 2017

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