Atlas of Genetics and Cytogenetics in Oncology and Haematology


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ABCC13 (ATP binding cassette subfamily C member 13 (pseudogene))

Identity

Alias (NCBI)ABCC13P
C21orf73
PRED6
HGNC (Hugo) ABCC13
HGNC Alias symbPRED6
C21orf73
ABCC13P
HGNC Previous nameATP-binding cassette, sub-family C (CFTR/MRP), member 13
LocusID (NCBI) 150000
Atlas_Id 60037
Location 21q11.2  [Link to chromosome band 21q11]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ABCC13   16022
Cards
Entrez_Gene (NCBI)ABCC13  150000  ATP binding cassette subfamily C member 13 (pseudogene)
AliasesABCC13P; C21orf73; PRED6
GeneCards (Weizmann)ABCC13
Ensembl hg19 (Hinxton)ENSG00000243064 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000243064 [Gene_View]  ENSG00000243064 [Sequence]  - [Contig_View]  ABCC13 [Vega]
ICGC DataPortalENSG00000243064
TCGA cBioPortalABCC13
AceView (NCBI)ABCC13
Genatlas (Paris)ABCC13
WikiGenes150000
SOURCE (Princeton)ABCC13
Genetics Home Reference (NIH)ABCC13
Genomic and cartography
GoldenPath hg38 (UCSC)ABCC13  -  
GoldenPath hg19 (UCSC)ABCC13  -  
GoldenPathABCC13 - [CytoView hg19]  ABCC13 - [CytoView hg38]
ImmunoBaseENSG00000243064
genome Data Viewer NCBIABCC13 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AF418600 AF518320 AF518321 AY063514 AY063515
RefSeq transcript (Entrez)NM_138726 NM_172024 NM_172025 NM_172026
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ABCC13
Alternative Splicing GalleryENSG00000243064
Gene ExpressionABCC13 [ NCBI-GEO ]   ABCC13 [ EBI - ARRAY_EXPRESS ]   ABCC13 [ SEEK ]   ABCC13 [ MEM ]
Gene Expression Viewer (FireBrowse)ABCC13 [ Firebrowse - Broad ]
GenevisibleExpression of ABCC13 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)150000
GTEX Portal (Tissue expression)ABCC13
Human Protein AtlasENSG00000243064-ABCC13 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ABCC13
DMDM Disease mutations150000
Blocks (Seattle)ABCC13
Human Protein Atlas [tissue]ENSG00000243064-ABCC13 [tissue]
HPRD10586
IPIIPI00025740   IPI00216009   IPI00216010   IPI00220831   IPI00172522   
Protein Interaction databases
FunCoupENSG00000243064
BioGRIDABCC13
STRING (EMBL)ABCC13
ZODIACABCC13
Ontologies - Pathways
Huge Navigator ABCC13 [HugePedia]
snp3D : Map Gene to Disease150000
BioCentury BCIQABCC13
ClinGenABCC13
Clinical trials, drugs, therapy
Protein Interactions : CTD150000
Pharm GKB GenePA134875904
Clinical trialABCC13
Miscellaneous
canSAR (ICR)ABCC13 (select the gene name)
HarmonizomeABCC13
DataMed IndexABCC13
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineABCC13
EVEXABCC13
GoPubMedABCC13
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Jul 16 15:46:39 CEST 2020

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