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ABCC5-AS1 (ABCC5 antisense RNA 1)

Identity

Alias_namesABCC5 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) ABCC5-AS1
LocusID (NCBI) 100873982
Atlas_Id 60038
Location 3q27.1  [Link to chromosome band 3q27]
Location_base_pair Starts at 184006338 and ends at 184011419 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ABCC5-AS1   40055
Cards
Entrez_Gene (NCBI)ABCC5-AS1  100873982  ABCC5 antisense RNA 1
Aliases
GeneCards (Weizmann)ABCC5-AS1
Ensembl hg19 (Hinxton)ENSG00000223882 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000223882 [Gene_View]  chr3:184006338-184011419 [Contig_View]  ABCC5-AS1 [Vega]
ICGC DataPortalENSG00000223882
TCGA cBioPortalABCC5-AS1
AceView (NCBI)ABCC5-AS1
Genatlas (Paris)ABCC5-AS1
WikiGenes100873982
SOURCE (Princeton)ABCC5-AS1
Genetics Home Reference (NIH)ABCC5-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)ABCC5-AS1  -     chr3:184006338-184011419 +  3q27.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ABCC5-AS1  -     3q27.1   [Description]    (hg19-Feb_2009)
EnsemblABCC5-AS1 - 3q27.1 [CytoView hg19]  ABCC5-AS1 - 3q27.1 [CytoView hg38]
Mapping of homologs : NCBIABCC5-AS1 [Mapview hg19]  ABCC5-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BE549568
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ABCC5-AS1
Cluster EST : UnigeneHs.570696 [ NCBI ]
CGAP (NCI)Hs.570696
Alternative Splicing GalleryENSG00000223882
Gene ExpressionABCC5-AS1 [ NCBI-GEO ]   ABCC5-AS1 [ EBI - ARRAY_EXPRESS ]   ABCC5-AS1 [ SEEK ]   ABCC5-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)ABCC5-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100873982
GTEX Portal (Tissue expression)ABCC5-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ABCC5-AS1
DMDM Disease mutations100873982
Blocks (Seattle)ABCC5-AS1
Human Protein AtlasENSG00000223882
Protein Interaction databases
FunCoupENSG00000223882
BioGRIDABCC5-AS1
STRING (EMBL)ABCC5-AS1
ZODIACABCC5-AS1
Ontologies - Pathways
Huge Navigator ABCC5-AS1 [HugePedia]
snp3D : Map Gene to Disease100873982
BioCentury BCIQABCC5-AS1
ClinGenABCC5-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100873982
Clinical trialABCC5-AS1
Miscellaneous
canSAR (ICR)ABCC5-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineABCC5-AS1
EVEXABCC5-AS1
GoPubMedABCC5-AS1
iHOPABCC5-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:00:38 CEST 2017

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