ABCC6 (ATP-binding cassette, sub-family C (CFTR/MRP), member 6)

Identity

Other names	ABC34
	ARA
	EST349056
	MLP1
	MOATE
	MRP6
	PXE
	PXE1
HGNC	ABCC6
Location	16p13.1
Location_base_pair	Starts at 16222545 and ends at 16224829 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	ABCC6   57
Entrez_Gene	ABCC6  368  ATP-binding cassette, sub-family C (CFTR/MRP), member 6
	Cards
GeneCards	ABCC6
Ensembl	ABCC6 [Search_View]   ENSG00000091262 [Gene_View]
Genatlas	ABCC6
GeneLynx	ABCC6
eGenome	ABCC6
euGene	368
	Genomic and cartography
GoldenPath	ABCC6  -  16p13.1   chr16:16222545-16224829 -  16p13.11   [Description]    (hg18-March_2006)
Ensembl	ABCC6 - 16p13.11 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	ABCC6
	Gene and transcription
Genbank	AF076622 [ ENTREZ ]
Genbank	AF168791 [ ENTREZ ]
Genbank	AI074459 [ ENTREZ ]
Genbank	AM711638 [ ENTREZ ]
Genbank	AM774324 [ ENTREZ ]
RefSeq	NM_001079528 [ SRS ]    NM_001079528 [ ENTREZ ]
RefSeq	NM_001171 [ SRS ]    NM_001171 [ ENTREZ ]
RefSeq	AC_000059 [ SRS ]    AC_000059 [ ENTREZ ]
RefSeq	AC_000148 [ SRS ]    AC_000148 [ ENTREZ ]
RefSeq	NC_000016 [ SRS ]    NC_000016 [ ENTREZ ]
RefSeq	NG_007558 [ SRS ]    NG_007558 [ ENTREZ ]
RefSeq	NT_010393 [ SRS ]    NT_010393 [ ENTREZ ]
RefSeq	NW_001838356 [ SRS ]    NW_001838356 [ ENTREZ ]
RefSeq	NW_926051 [ SRS ]    NW_926051 [ ENTREZ ]
AceView	ABCC6 AceView - NCBI
Unigene	Hs.699879 [ SRS ]    Hs.699879 [ NCBI ]     HS699879 [ spliceNest ]
Fast-db	4419 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	O95255 [ SRS]    O95255 [ EXPASY ]     O95255 [ INTERPRO ]     O95255 [ UNIPROT ]
Prosite	PS50929 ABC_TM1F [ SRS ]    PS50929 ABC_TM1F [ Expasy ]
Prosite	PS00211 ABC_TRANSPORTER_1 [ SRS ]    PS00211 ABC_TRANSPORTER_1 [ Expasy ]
Prosite	PS50893 ABC_TRANSPORTER_2 [ SRS ]    PS50893 ABC_TRANSPORTER_2 [ Expasy ]
Interpro	IPR003593 AAA+_ATPase_core [ SRS ]    IPR003593 AAA+_ATPase_core [ EBI ]
Interpro	IPR011527 ABC_TM_1 [ SRS ]    IPR011527 ABC_TM_1 [ EBI ]
Interpro	IPR001140 ABC_TM_transpt [ SRS ]    IPR001140 ABC_TM_transpt [ EBI ]
Interpro	IPR003439 ABC_transporter-like [ SRS ]    IPR003439 ABC_transporter-like [ EBI ]
Interpro	IPR005292 Multidrug-R_assoc_MRP [ SRS ]    IPR005292 Multidrug-R_assoc_MRP [ EBI ]
CluSTr	O95255
Pfam	PF00664 ABC_membrane [ SRS ]    PF00664 ABC_membrane [ Sanger ]    pfam00664 [ NCBI-CDD ]
Pfam	PF00005 ABC_tran [ SRS ]    PF00005 ABC_tran [ Sanger ]    pfam00005 [ NCBI-CDD ]
Smart	SM00382 AAA [EMBL]
Prodom	PD000006 ABC_transporter[INRA-Toulouse]
Prodom	O95255 MRP6_HUMAN [ Domain structure ]   O95255 MRP6_HUMAN  [ sequences sharing at least 1 domain ]
Blocks	O95255
HPRD	04453
	Protein Interaction databases
DIP	O95255
IntAct	O95255
	Polymorphism : SNP, mutations, diseases
OMIM	177850;264800;603234    [ map ]
GENECLINICS	177850;264800;603234
SNP	ABCC6 [dbSNP-NCBI]
SNP	NM_001079528 [SNP-NCI]
SNP	NM_001171 [SNP-NCI]
SNP	ABCC6 [GeneSNPs - Utah]  ABCC6] [HGBASE - SRS]
HAPMAP	ABCC6 [HAPMAP]
HGMD	ABCC6
	General knowledge
Family Browser	ABCC6 [UCSC Family Browser]
SOURCE	NM_001079528
SOURCE	NM_001171
SMD	Hs.699879
SAGE	Hs.699879
GO	nucleotide binding [Amigo]  nucleotide binding
GO	transporter activity [Amigo]  transporter activity
GO	ATP binding [Amigo]  ATP binding
GO	ATP binding [Amigo]  ATP binding
GO	plasma membrane [Amigo]  plasma membrane
GO	transport [Amigo]  transport
GO	visual perception [Amigo]  visual perception
GO	integral to membrane [Amigo]  integral to membrane
GO	ATPase activity [Amigo]  ATPase activity
GO	response to drug [Amigo]  response to drug
GO	ATPase activity, coupled to transmembrane movement of substances [Amigo]  ATPase activity, coupled to transmembrane movement of substances
GO	response to stimulus [Amigo]  response to stimulus
PubGene	ABCC6
TreeFam	ABCC6
CTD	368 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	ABCC6 Related clones (RZPD - Berlin)
	PubMed
PubMed	59 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Tue Oct 14 20:19:02 2008