Atlas of Genetics and Cytogenetics in Oncology and Haematology

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ABCG2 (ATP binding cassette subfamily G member 2 (Junior blood group))

Identity

Alias (NCBI)ABC15
ABCP
BCRP
BCRP1
BMDP
CD338
CDw338
EST157481
GOUT1
MRX
MXR
MXR-1
MXR1
UAQTL1
HGNC (Hugo) ABCG2
HGNC Alias symbEST157481
MXR
BCRP
ABCP
CD338
HGNC Previous nameATP-binding cassette, sub-family G (WHITE), member 2
 ATP-binding cassette, sub-family G (WHITE), member 2 (Junior blood group)
LocusID (NCBI) 9429
Atlas_Id 546
Location 4q22.1  [Link to chromosome band 4q22]
Location_base_pair Starts at 88090269 and ends at 88158639 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ABCG2 (4q22.1) / DCAF5 (14q24.1)DCAF5 (14q24.1) / ABCG2 (4q22.1)ZKSCAN1 (7q22.1) / ABCG2 (4q22.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)ABCG2   74
LRG (Locus Reference Genomic)LRG_823
Cards
Entrez_Gene (NCBI)ABCG2    ATP binding cassette subfamily G member 2 (Junior blood group)
AliasesABC15; ABCP; BCRP; BCRP1; 
BMDP; CD338; CDw338; EST157481; GOUT1; MRX; MXR; MXR-1; MXR1; UAQTL1
GeneCards (Weizmann)ABCG2
Ensembl hg19 (Hinxton)ENSG00000118777 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000118777 [Gene_View]  ENSG00000118777 [Sequence]  chr4:88090269-88158639 [Contig_View]  ABCG2 [Vega]
ICGC DataPortalENSG00000118777
TCGA cBioPortalABCG2
AceView (NCBI)ABCG2
Genatlas (Paris)ABCG2
SOURCE (Princeton)ABCG2
Genetics Home Reference (NIH)ABCG2
Genomic and cartography
GoldenPath hg38 (UCSC)ABCG2  -     chr4:88090269-88158639 -  4q22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ABCG2  -     4q22.1   [Description]    (hg19-Feb_2009)
GoldenPathABCG2 - 4q22.1 [CytoView hg19]  ABCG2 - 4q22.1 [CytoView hg38]
ImmunoBaseENSG00000118777
genome Data Viewer NCBIABCG2 [Mapview hg19]  
OMIM138900   603756   614490   
Gene and transcription
Genbank (Entrez)AB051855 AB056867 AF093771 AF093772 AF098951
RefSeq transcript (Entrez)NM_001257386 NM_001348985 NM_001348986 NM_001348987 NM_001348988 NM_001348989 NM_004827
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ABCG2
Alternative Splicing GalleryENSG00000118777
Gene ExpressionABCG2 [ NCBI-GEO ]   ABCG2 [ EBI - ARRAY_EXPRESS ]   ABCG2 [ SEEK ]   ABCG2 [ MEM ]
Gene Expression Viewer (FireBrowse)ABCG2 [ Firebrowse - Broad ]
GenevisibleExpression of ABCG2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9429
GTEX Portal (Tissue expression)ABCG2
Human Protein AtlasENSG00000118777-ABCG2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ABCG2
Blocks (Seattle)ABCG2
Human Protein Atlas [tissue]ENSG00000118777-ABCG2 [tissue]
HPRD04783
IPIIPI00298214   IPI00607625   IPI00965407   IPI00964954   
Protein Interaction databases
BioGRIDABCG2
STRING (EMBL)ABCG2
ZODIACABCG2
Ontologies - Pathways
Litterature
PubMed499 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXABCG2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Thu Mar 25 19:09:32 CET 2021
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