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ABHD10 (abhydrolase domain containing 10)

Identity

Alias_symbol (synonym)FLJ11342
Other alias-
HGNC (Hugo) ABHD10
LocusID (NCBI) 55347
Atlas_Id 60047
Location 3q13.2  [Link to chromosome band 3q13]
Location_base_pair Starts at 111978876 and ends at 111993368 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ABHD10   25656
Cards
Entrez_Gene (NCBI)ABHD10  55347  abhydrolase domain containing 10
Aliases
GeneCards (Weizmann)ABHD10
Ensembl hg19 (Hinxton)ENSG00000144827 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000144827 [Gene_View]  chr3:111978876-111993368 [Contig_View]  ABHD10 [Vega]
ICGC DataPortalENSG00000144827
TCGA cBioPortalABHD10
AceView (NCBI)ABHD10
Genatlas (Paris)ABHD10
WikiGenes55347
SOURCE (Princeton)ABHD10
Genetics Home Reference (NIH)ABHD10
Genomic and cartography
GoldenPath hg38 (UCSC)ABHD10  -     chr3:111978876-111993368 +  3q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ABHD10  -     3q13.2   [Description]    (hg19-Feb_2009)
EnsemblABHD10 - 3q13.2 [CytoView hg19]  ABHD10 - 3q13.2 [CytoView hg38]
Mapping of homologs : NCBIABHD10 [Mapview hg19]  ABHD10 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK002204 AK093591 AK300018 AL713726 AM392560
RefSeq transcript (Entrez)NM_001272069 NM_018394
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ABHD10
Cluster EST : UnigeneHs.477115 [ NCBI ]
CGAP (NCI)Hs.477115
Alternative Splicing GalleryENSG00000144827
Gene ExpressionABHD10 [ NCBI-GEO ]   ABHD10 [ EBI - ARRAY_EXPRESS ]   ABHD10 [ SEEK ]   ABHD10 [ MEM ]
Gene Expression Viewer (FireBrowse)ABHD10 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55347
GTEX Portal (Tissue expression)ABHD10
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NUJ1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NUJ1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NUJ1
Splice isoforms : SwissVarQ9NUJ1
Catalytic activity : Enzyme3.1.1.93 [ Enzyme-Expasy ]   3.1.1.933.1.1.93 [ IntEnz-EBI ]   3.1.1.93 [ BRENDA ]   3.1.1.93 [ KEGG ]   
PhosPhoSitePlusQ9NUJ1
Domains : Interpro (EBI)AB_hydrolase    AB_hydrolase_1   
Domain families : Pfam (Sanger)Abhydrolase_1 (PF00561)   
Domain families : Pfam (NCBI)pfam00561   
Conserved Domain (NCBI)ABHD10
DMDM Disease mutations55347
Blocks (Seattle)ABHD10
SuperfamilyQ9NUJ1
Human Protein AtlasENSG00000144827
Peptide AtlasQ9NUJ1
HPRD07751
IPIIPI00020075   IPI01010004   IPI00946707   IPI00945913   IPI00790966   
Protein Interaction databases
DIP (DOE-UCLA)Q9NUJ1
IntAct (EBI)Q9NUJ1
FunCoupENSG00000144827
BioGRIDABHD10
STRING (EMBL)ABHD10
ZODIACABHD10
Ontologies - Pathways
QuickGOQ9NUJ1
Ontology : AmiGOhydrolase activity, hydrolyzing O-glycosyl compounds  hydrolase activity, hydrolyzing O-glycosyl compounds  mitochondrion  mitochondrial matrix  cytosol  glucuronoside catabolic process  cellular glucuronidation  mycophenolic acid acyl-glucuronide esterase activity  
Ontology : EGO-EBIhydrolase activity, hydrolyzing O-glycosyl compounds  hydrolase activity, hydrolyzing O-glycosyl compounds  mitochondrion  mitochondrial matrix  cytosol  glucuronoside catabolic process  cellular glucuronidation  mycophenolic acid acyl-glucuronide esterase activity  
NDEx NetworkABHD10
Atlas of Cancer Signalling NetworkABHD10
Wikipedia pathwaysABHD10
Orthology - Evolution
OrthoDB55347
GeneTree (enSembl)ENSG00000144827
Phylogenetic Trees/Animal Genes : TreeFamABHD10
HOVERGENQ9NUJ1
HOGENOMQ9NUJ1
Homologs : HomoloGeneABHD10
Homology/Alignments : Family Browser (UCSC)ABHD10
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerABHD10 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ABHD10
dbVarABHD10
ClinVarABHD10
1000_GenomesABHD10 
Exome Variant ServerABHD10
ExAC (Exome Aggregation Consortium)ABHD10 (select the gene name)
Genetic variants : HAPMAP55347
Genomic Variants (DGV)ABHD10 [DGVbeta]
DECIPHERABHD10 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisABHD10 
Mutations
ICGC Data PortalABHD10 
TCGA Data PortalABHD10 
Broad Tumor PortalABHD10
OASIS PortalABHD10 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICABHD10  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDABHD10
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch ABHD10
DgiDB (Drug Gene Interaction Database)ABHD10
DoCM (Curated mutations)ABHD10 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ABHD10 (select a term)
intoGenABHD10
Cancer3DABHD10(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenABHD10
Genetic Testing Registry ABHD10
NextProtQ9NUJ1 [Medical]
TSGene55347
GENETestsABHD10
Target ValidationABHD10
Huge Navigator ABHD10 [HugePedia]
snp3D : Map Gene to Disease55347
BioCentury BCIQABHD10
ClinGenABHD10
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55347
Chemical/Pharm GKB GenePA134978569
Clinical trialABHD10
Miscellaneous
canSAR (ICR)ABHD10 (select the gene name)
Probes
Litterature
PubMed23 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineABHD10
EVEXABHD10
GoPubMedABHD10
iHOPABHD10
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:37:04 CEST 2017

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