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ABHD14B (abhydrolase domain containing 14B)

Identity

Alias_symbol (synonym)MGC15429
CIB
Other aliasHEL-S-299
HGNC (Hugo) ABHD14B
LocusID (NCBI) 84836
Atlas_Id 60053
Location 3p21.2  [Link to chromosome band 3p21]
Location_base_pair Starts at 51968510 and ends at 51974630 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ABHD14B (3p21.2) / APLP1 (19q13.12)ABHD14B (3p21.2) / CHST5 (16q23.1)ABHD14B (3p21.2) / COL7A1 (3p21.31)
ABHD14B (3p21.2) / POC1A (3p21.2)BNIP3L (8p21.2) / ABHD14B (3p21.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ABHD14B   28235
Cards
Entrez_Gene (NCBI)ABHD14B  84836  abhydrolase domain containing 14B
AliasesCIB; HEL-S-299
GeneCards (Weizmann)ABHD14B
Ensembl hg19 (Hinxton)ENSG00000114779 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000114779 [Gene_View]  chr3:51968510-51974630 [Contig_View]  ABHD14B [Vega]
ICGC DataPortalENSG00000114779
TCGA cBioPortalABHD14B
AceView (NCBI)ABHD14B
Genatlas (Paris)ABHD14B
WikiGenes84836
SOURCE (Princeton)ABHD14B
Genetics Home Reference (NIH)ABHD14B
Genomic and cartography
GoldenPath hg38 (UCSC)ABHD14B  -     chr3:51968510-51974630 -  3p21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ABHD14B  -     3p21.2   [Description]    (hg19-Feb_2009)
EnsemblABHD14B - 3p21.2 [CytoView hg19]  ABHD14B - 3p21.2 [CytoView hg38]
Mapping of homologs : NCBIABHD14B [Mapview hg19]  ABHD14B [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK075112 AK092152 AK096073 AK296599 AK298022
RefSeq transcript (Entrez)NM_001146314 NM_001254753 NM_032750
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ABHD14B
Cluster EST : UnigeneHs.420796 [ NCBI ]
CGAP (NCI)Hs.420796
Alternative Splicing GalleryENSG00000114779
Gene ExpressionABHD14B [ NCBI-GEO ]   ABHD14B [ EBI - ARRAY_EXPRESS ]   ABHD14B [ SEEK ]   ABHD14B [ MEM ]
Gene Expression Viewer (FireBrowse)ABHD14B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84836
GTEX Portal (Tissue expression)ABHD14B
Human Protein AtlasENSG00000114779-ABHD14B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96IU4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96IU4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96IU4
Splice isoforms : SwissVarQ96IU4
Catalytic activity : Enzyme3.-.-.- [ Enzyme-Expasy ]   3.-.-.-3.-.-.- [ IntEnz-EBI ]   3.-.-.- [ BRENDA ]   3.-.-.- [ KEGG ]   
PhosPhoSitePlusQ96IU4
Domains : Interpro (EBI)AB_hydrolase    AB_hydrolase_1    ABHD14B   
Domain families : Pfam (Sanger)Abhydrolase_6 (PF12697)   
Domain families : Pfam (NCBI)pfam12697   
Conserved Domain (NCBI)ABHD14B
DMDM Disease mutations84836
Blocks (Seattle)ABHD14B
PDB (SRS)1IMJ   
PDB (PDBSum)1IMJ   
PDB (IMB)1IMJ   
PDB (RSDB)1IMJ   
Structural Biology KnowledgeBase1IMJ   
SCOP (Structural Classification of Proteins)1IMJ   
CATH (Classification of proteins structures)1IMJ   
SuperfamilyQ96IU4
Human Protein Atlas [tissue]ENSG00000114779-ABHD14B [tissue]
Peptide AtlasQ96IU4
HPRD17504
IPIIPI00063827   IPI00167615   IPI00908954   IPI00910706   IPI00747859   IPI00910875   
Protein Interaction databases
DIP (DOE-UCLA)Q96IU4
IntAct (EBI)Q96IU4
FunCoupENSG00000114779
BioGRIDABHD14B
STRING (EMBL)ABHD14B
ZODIACABHD14B
Ontologies - Pathways
QuickGOQ96IU4
Ontology : AmiGOprotein binding  nucleus  nucleolus  cytosol  cytosol  hydrolase activity  hydrolase activity  positive regulation of transcription from RNA polymerase II promoter  3'-phosphoadenosine 5'-phosphosulfate metabolic process  extracellular exosome  
Ontology : EGO-EBIprotein binding  nucleus  nucleolus  cytosol  cytosol  hydrolase activity  hydrolase activity  positive regulation of transcription from RNA polymerase II promoter  3'-phosphoadenosine 5'-phosphosulfate metabolic process  extracellular exosome  
NDEx NetworkABHD14B
Atlas of Cancer Signalling NetworkABHD14B
Wikipedia pathwaysABHD14B
Orthology - Evolution
OrthoDB84836
GeneTree (enSembl)ENSG00000114779
Phylogenetic Trees/Animal Genes : TreeFamABHD14B
HOVERGENQ96IU4
HOGENOMQ96IU4
Homologs : HomoloGeneABHD14B
Homology/Alignments : Family Browser (UCSC)ABHD14B
Gene fusions - Rearrangements
Fusion: Tumor Portal ABHD14B
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerABHD14B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ABHD14B
dbVarABHD14B
ClinVarABHD14B
1000_GenomesABHD14B 
Exome Variant ServerABHD14B
ExAC (Exome Aggregation Consortium)ENSG00000114779
GNOMAD BrowserENSG00000114779
Genetic variants : HAPMAP84836
Genomic Variants (DGV)ABHD14B [DGVbeta]
DECIPHERABHD14B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisABHD14B 
Mutations
ICGC Data PortalABHD14B 
TCGA Data PortalABHD14B 
Broad Tumor PortalABHD14B
OASIS PortalABHD14B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICABHD14B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDABHD14B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ABHD14B
DgiDB (Drug Gene Interaction Database)ABHD14B
DoCM (Curated mutations)ABHD14B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ABHD14B (select a term)
intoGenABHD14B
Cancer3DABHD14B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenABHD14B
Genetic Testing Registry ABHD14B
NextProtQ96IU4 [Medical]
TSGene84836
GENETestsABHD14B
Target ValidationABHD14B
Huge Navigator ABHD14B [HugePedia]
snp3D : Map Gene to Disease84836
BioCentury BCIQABHD14B
ClinGenABHD14B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84836
Chemical/Pharm GKB GenePA142672660
Clinical trialABHD14B
Miscellaneous
canSAR (ICR)ABHD14B (select the gene name)
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineABHD14B
EVEXABHD14B
GoPubMedABHD14B
iHOPABHD14B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:36:46 CET 2017

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