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ABHD15 (abhydrolase domain containing 15)

Identity

Other alias-
HGNC (Hugo) ABHD15
LocusID (NCBI) 116236
Atlas_Id 60054
Location 17q11.2  [Link to chromosome band 17q11]
Location_base_pair Starts at 29560671 and ends at 29567024 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ABHD15 (17q11.2) / SSH2 (17q11.2)ANO1 (11q13.3) / ABHD15 (17q11.2)PIP5K1B (9q21.11) / ABHD15 (17q11.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ABHD15   26971
Cards
Entrez_Gene (NCBI)ABHD15  116236  abhydrolase domain containing 15
Aliases
GeneCards (Weizmann)ABHD15
Ensembl hg19 (Hinxton)ENSG00000168792 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000168792 [Gene_View]  chr17:29560671-29567024 [Contig_View]  ABHD15 [Vega]
ICGC DataPortalENSG00000168792
TCGA cBioPortalABHD15
AceView (NCBI)ABHD15
Genatlas (Paris)ABHD15
WikiGenes116236
SOURCE (Princeton)ABHD15
Genetics Home Reference (NIH)ABHD15
Genomic and cartography
GoldenPath hg38 (UCSC)ABHD15  -     chr17:29560671-29567024 -  17q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ABHD15  -     17q11.2   [Description]    (hg19-Feb_2009)
EnsemblABHD15 - 17q11.2 [CytoView hg19]  ABHD15 - 17q11.2 [CytoView hg38]
Mapping of homologs : NCBIABHD15 [Mapview hg19]  ABHD15 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK055889 AK056717 AY358212 BC012476
RefSeq transcript (Entrez)NM_198147
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ABHD15
Cluster EST : UnigeneHs.106510 [ NCBI ]
CGAP (NCI)Hs.106510
Alternative Splicing GalleryENSG00000168792
Gene ExpressionABHD15 [ NCBI-GEO ]   ABHD15 [ EBI - ARRAY_EXPRESS ]   ABHD15 [ SEEK ]   ABHD15 [ MEM ]
Gene Expression Viewer (FireBrowse)ABHD15 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)116236
GTEX Portal (Tissue expression)ABHD15
Human Protein AtlasENSG00000168792-ABHD15 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6UXT9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6UXT9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6UXT9
Splice isoforms : SwissVarQ6UXT9
Catalytic activity : Enzyme3.1.1.- [ Enzyme-Expasy ]   3.1.1.-3.1.1.- [ IntEnz-EBI ]   3.1.1.- [ BRENDA ]   3.1.1.- [ KEGG ]   
PhosPhoSitePlusQ6UXT9
Domains : Interpro (EBI)AB_hydrolase    Hydrolase_4   
Domain families : Pfam (Sanger)Hydrolase_4 (PF12146)   
Domain families : Pfam (NCBI)pfam12146   
Conserved Domain (NCBI)ABHD15
DMDM Disease mutations116236
Blocks (Seattle)ABHD15
SuperfamilyQ6UXT9
Human Protein Atlas [tissue]ENSG00000168792-ABHD15 [tissue]
Peptide AtlasQ6UXT9
HPRD14014
IPIIPI00304804   
Protein Interaction databases
DIP (DOE-UCLA)Q6UXT9
IntAct (EBI)Q6UXT9
FunCoupENSG00000168792
BioGRIDABHD15
STRING (EMBL)ABHD15
ZODIACABHD15
Ontologies - Pathways
QuickGOQ6UXT9
Ontology : AmiGOextracellular region  membrane  hydrolase activity, acting on ester bonds  cellular lipid metabolic process  
Ontology : EGO-EBIextracellular region  membrane  hydrolase activity, acting on ester bonds  cellular lipid metabolic process  
NDEx NetworkABHD15
Atlas of Cancer Signalling NetworkABHD15
Wikipedia pathwaysABHD15
Orthology - Evolution
OrthoDB116236
GeneTree (enSembl)ENSG00000168792
Phylogenetic Trees/Animal Genes : TreeFamABHD15
HOVERGENQ6UXT9
HOGENOMQ6UXT9
Homologs : HomoloGeneABHD15
Homology/Alignments : Family Browser (UCSC)ABHD15
Gene fusions - Rearrangements
Fusion: Tumor Portal ABHD15
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerABHD15 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ABHD15
dbVarABHD15
ClinVarABHD15
1000_GenomesABHD15 
Exome Variant ServerABHD15
ExAC (Exome Aggregation Consortium)ENSG00000168792
GNOMAD BrowserENSG00000168792
Genetic variants : HAPMAP116236
Genomic Variants (DGV)ABHD15 [DGVbeta]
DECIPHERABHD15 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisABHD15 
Mutations
ICGC Data PortalABHD15 
TCGA Data PortalABHD15 
Broad Tumor PortalABHD15
OASIS PortalABHD15 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICABHD15  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDABHD15
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ABHD15
DgiDB (Drug Gene Interaction Database)ABHD15
DoCM (Curated mutations)ABHD15 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ABHD15 (select a term)
intoGenABHD15
Cancer3DABHD15(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenABHD15
Genetic Testing Registry ABHD15
NextProtQ6UXT9 [Medical]
TSGene116236
GENETestsABHD15
Target ValidationABHD15
Huge Navigator ABHD15 [HugePedia]
snp3D : Map Gene to Disease116236
BioCentury BCIQABHD15
ClinGenABHD15
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD116236
Chemical/Pharm GKB GenePA164714659
Clinical trialABHD15
Miscellaneous
canSAR (ICR)ABHD15 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineABHD15
EVEXABHD15
GoPubMedABHD15
iHOPABHD15
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:36:46 CET 2017

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