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ABHD18 (abhydrolase domain containing 18)

Identity

Alias_namesC4orf29
chromosome 4 open reading frame 29
Alias_symbol (synonym)FLJ21106
Other alias
HGNC (Hugo) ABHD18
LocusID (NCBI) 80167
Atlas_Id 77805
Location 4q28.2  [Link to chromosome band 4q28]
Location_base_pair Starts at 127965256 and ends at 128039711 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ABHD18 (4q28.2) / SLC25A31 (4q28.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ABHD18   26111
Cards
Entrez_Gene (NCBI)ABHD18  80167  abhydrolase domain containing 18
AliasesC4orf29
GeneCards (Weizmann)ABHD18
Ensembl hg19 (Hinxton)ENSG00000164074 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000164074 [Gene_View]  chr4:127965256-128039711 [Contig_View]  ABHD18 [Vega]
ICGC DataPortalENSG00000164074
TCGA cBioPortalABHD18
AceView (NCBI)ABHD18
Genatlas (Paris)ABHD18
WikiGenes80167
SOURCE (Princeton)ABHD18
Genetics Home Reference (NIH)ABHD18
Genomic and cartography
GoldenPath hg38 (UCSC)ABHD18  -     chr4:127965256-128039711 +  4q28.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ABHD18  -     4q28.2   [Description]    (hg19-Feb_2009)
EnsemblABHD18 - 4q28.2 [CytoView hg19]  ABHD18 - 4q28.2 [CytoView hg38]
Mapping of homologs : NCBIABHD18 [Mapview hg19]  ABHD18 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK024759 BC034253 BC058847 BC058898 BC075793
RefSeq transcript (Entrez)NM_001039717 NM_001319305 NM_001319306 NM_001319307 NM_025097
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ABHD18
Cluster EST : UnigeneHs.445817 [ NCBI ]
CGAP (NCI)Hs.445817
Alternative Splicing GalleryENSG00000164074
Gene ExpressionABHD18 [ NCBI-GEO ]   ABHD18 [ EBI - ARRAY_EXPRESS ]   ABHD18 [ SEEK ]   ABHD18 [ MEM ]
Gene Expression Viewer (FireBrowse)ABHD18 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)80167
GTEX Portal (Tissue expression)ABHD18
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ0P651   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ0P651  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ0P651
Splice isoforms : SwissVarQ0P651
PhosPhoSitePlusQ0P651
Domains : Interpro (EBI)AB_hydrolase    ABHD18   
Domain families : Pfam (Sanger)DUF2048 (PF09752)   
Domain families : Pfam (NCBI)pfam09752   
Conserved Domain (NCBI)ABHD18
DMDM Disease mutations80167
Blocks (Seattle)ABHD18
SuperfamilyQ0P651
Human Protein AtlasENSG00000164074
Peptide AtlasQ0P651
HPRD07953
IPIIPI00790591   IPI00937556   IPI00855986   IPI00943278   IPI00018085   IPI00968103   IPI00966147   IPI00966429   
Protein Interaction databases
DIP (DOE-UCLA)Q0P651
IntAct (EBI)Q0P651
FunCoupENSG00000164074
BioGRIDABHD18
STRING (EMBL)ABHD18
ZODIACABHD18
Ontologies - Pathways
QuickGOQ0P651
Ontology : AmiGOextracellular region  
Ontology : EGO-EBIextracellular region  
NDEx NetworkABHD18
Atlas of Cancer Signalling NetworkABHD18
Wikipedia pathwaysABHD18
Orthology - Evolution
OrthoDB80167
GeneTree (enSembl)ENSG00000164074
Phylogenetic Trees/Animal Genes : TreeFamABHD18
HOVERGENQ0P651
HOGENOMQ0P651
Homologs : HomoloGeneABHD18
Homology/Alignments : Family Browser (UCSC)ABHD18
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerABHD18 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ABHD18
dbVarABHD18
ClinVarABHD18
1000_GenomesABHD18 
Exome Variant ServerABHD18
ExAC (Exome Aggregation Consortium)ABHD18 (select the gene name)
Genetic variants : HAPMAP80167
Genomic Variants (DGV)ABHD18 [DGVbeta]
DECIPHERABHD18 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisABHD18 
Mutations
ICGC Data PortalABHD18 
TCGA Data PortalABHD18 
Broad Tumor PortalABHD18
OASIS PortalABHD18 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDABHD18
BioMutasearch ABHD18
DgiDB (Drug Gene Interaction Database)ABHD18
DoCM (Curated mutations)ABHD18 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ABHD18 (select a term)
intoGenABHD18
Cancer3DABHD18(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenABHD18
Genetic Testing Registry ABHD18
NextProtQ0P651 [Medical]
TSGene80167
GENETestsABHD18
Target ValidationABHD18
Huge Navigator ABHD18 [HugePedia]
snp3D : Map Gene to Disease80167
BioCentury BCIQABHD18
ClinGenABHD18
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD80167
Chemical/Pharm GKB GenePA147358673
Clinical trialABHD18
Miscellaneous
canSAR (ICR)ABHD18 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineABHD18
EVEXABHD18
GoPubMedABHD18
iHOPABHD18
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:37:07 CEST 2017

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