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ABHD8 (abhydrolase domain containing 8)

Identity

Alias_symbol (synonym)FLJ11743
MGC14280
MGC2512
Other alias-
HGNC (Hugo) ABHD8
LocusID (NCBI) 79575
Atlas_Id 60062
Location 19p13.11  [Link to chromosome band 19p13]
Location_base_pair Starts at 17292131 and ends at 17303473 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ABHD8   23759
Cards
Entrez_Gene (NCBI)ABHD8  79575  abhydrolase domain containing 8
Aliases
GeneCards (Weizmann)ABHD8
Ensembl hg19 (Hinxton)ENSG00000127220 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000127220 [Gene_View]  chr19:17292131-17303473 [Contig_View]  ABHD8 [Vega]
ICGC DataPortalENSG00000127220
TCGA cBioPortalABHD8
AceView (NCBI)ABHD8
Genatlas (Paris)ABHD8
WikiGenes79575
SOURCE (Princeton)ABHD8
Genetics Home Reference (NIH)ABHD8
Genomic and cartography
GoldenPath hg38 (UCSC)ABHD8  -     chr19:17292131-17303473 -  19p13.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ABHD8  -     19p13.11   [Description]    (hg19-Feb_2009)
EnsemblABHD8 - 19p13.11 [CytoView hg19]  ABHD8 - 19p13.11 [CytoView hg38]
Mapping of homologs : NCBIABHD8 [Mapview hg19]  ABHD8 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK021805 AK225140 AK225340 AK298251 AK315366
RefSeq transcript (Entrez)NM_024527
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ABHD8
Cluster EST : UnigeneHs.515664 [ NCBI ]
CGAP (NCI)Hs.515664
Alternative Splicing GalleryENSG00000127220
Gene ExpressionABHD8 [ NCBI-GEO ]   ABHD8 [ EBI - ARRAY_EXPRESS ]   ABHD8 [ SEEK ]   ABHD8 [ MEM ]
Gene Expression Viewer (FireBrowse)ABHD8 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79575
GTEX Portal (Tissue expression)ABHD8
Human Protein AtlasENSG00000127220-ABHD8 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96I13   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96I13  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96I13
Splice isoforms : SwissVarQ96I13
Catalytic activity : Enzyme3.-.-.- [ Enzyme-Expasy ]   3.-.-.-3.-.-.- [ IntEnz-EBI ]   3.-.-.- [ BRENDA ]   3.-.-.- [ KEGG ]   
PhosPhoSitePlusQ96I13
Domains : Interpro (EBI)AB_hydrolase    AB_hydrolase_1    Epox_hydrolase-like   
Domain families : Pfam (Sanger)Abhydrolase_1 (PF00561)   
Domain families : Pfam (NCBI)pfam00561   
Conserved Domain (NCBI)ABHD8
DMDM Disease mutations79575
Blocks (Seattle)ABHD8
SuperfamilyQ96I13
Human Protein Atlas [tissue]ENSG00000127220-ABHD8 [tissue]
Peptide AtlasQ96I13
HPRD12409
IPIIPI00101651   IPI00980323   
Protein Interaction databases
DIP (DOE-UCLA)Q96I13
IntAct (EBI)Q96I13
FunCoupENSG00000127220
BioGRIDABHD8
STRING (EMBL)ABHD8
ZODIACABHD8
Ontologies - Pathways
QuickGOQ96I13
Ontology : AmiGOhydrolase activity  extracellular exosome  
Ontology : EGO-EBIhydrolase activity  extracellular exosome  
NDEx NetworkABHD8
Atlas of Cancer Signalling NetworkABHD8
Wikipedia pathwaysABHD8
Orthology - Evolution
OrthoDB79575
GeneTree (enSembl)ENSG00000127220
Phylogenetic Trees/Animal Genes : TreeFamABHD8
HOVERGENQ96I13
HOGENOMQ96I13
Homologs : HomoloGeneABHD8
Homology/Alignments : Family Browser (UCSC)ABHD8
Gene fusions - Rearrangements
Fusion: Tumor Portal ABHD8
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerABHD8 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ABHD8
dbVarABHD8
ClinVarABHD8
1000_GenomesABHD8 
Exome Variant ServerABHD8
ExAC (Exome Aggregation Consortium)ENSG00000127220
GNOMAD BrowserENSG00000127220
Genetic variants : HAPMAP79575
Genomic Variants (DGV)ABHD8 [DGVbeta]
DECIPHERABHD8 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisABHD8 
Mutations
ICGC Data PortalABHD8 
TCGA Data PortalABHD8 
Broad Tumor PortalABHD8
OASIS PortalABHD8 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICABHD8  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDABHD8
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ABHD8
DgiDB (Drug Gene Interaction Database)ABHD8
DoCM (Curated mutations)ABHD8 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ABHD8 (select a term)
intoGenABHD8
Cancer3DABHD8(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenABHD8
Genetic Testing Registry ABHD8
NextProtQ96I13 [Medical]
TSGene79575
GENETestsABHD8
Target ValidationABHD8
Huge Navigator ABHD8 [HugePedia]
snp3D : Map Gene to Disease79575
BioCentury BCIQABHD8
ClinGenABHD8
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79575
Chemical/Pharm GKB GenePA134994313
Clinical trialABHD8
Miscellaneous
canSAR (ICR)ABHD8 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineABHD8
EVEXABHD8
GoPubMedABHD8
iHOPABHD8
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:36:49 CET 2017

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