ABLIM1 (actin binding LIM protein 1)

Identity

Other names	ABLIM
	DKFZp781D0148
	FLJ14564
	KIAA0059
	LIMAB1
	LIMATIN
	MGC1224
Hugo	ABLIM1
Location	10q25
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
Hugo	ABLIM1
GDB	ABLIM1
Entrez_Gene	ABLIM1  3983  actin binding LIM protein 1
	Cards
GeneCards	ABLIM1
Ensembl	ABLIM1 [Search_View]   ENSG00000099204 [Gene_View]
Genatlas	ABLIM1
GeneLynx	ABLIM1
eGenome	ABLIM1
euGene	3983
	Genomic and cartography
GoldenPath	ABLIM1  -  10q25   chr10:116180860-116434404 -  10q25.3   [Description]    (hg18-March_2006)
Ensembl	ABLIM1 - 10q25.3 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	ABLIM1
	Gene and transcription
Genbank	AA314019 [ ENTREZ ]
Genbank	AF005654 [ ENTREZ ]
Genbank	AI680726 [ ENTREZ ]
Genbank	AK054890 [ ENTREZ ]
Genbank	AK057834 [ ENTREZ ]
RefSeq	NM_001003407 [ SRS ]    NM_001003407 [ ENTREZ ]
RefSeq	NM_001003408 [ SRS ]    NM_001003408 [ ENTREZ ]
RefSeq	NM_002313 [ SRS ]    NM_002313 [ ENTREZ ]
RefSeq	NM_006720 [ SRS ]    NM_006720 [ ENTREZ ]
RefSeq	AC_000053 [ SRS ]    AC_000053 [ ENTREZ ]
RefSeq	NC_000010 [ SRS ]    NC_000010 [ ENTREZ ]
RefSeq	NT_030059 [ SRS ]    NT_030059 [ ENTREZ ]
RefSeq	NW_924884 [ SRS ]    NW_924884 [ ENTREZ ]
AceView	ABLIM1 AceView - NCBI
Unigene	Hs.593868 [ SRS ]    Hs.593868 [ NCBI ]     HS593868 [ spliceNest ]
Fast-db	16829 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	O14639 [ SRS]    O14639 [ EXPASY ]     O14639 [ INTERPRO ]
Prosite	PS51089 HP [ SRS ]    PS51089 HP [ Expasy ]
Prosite	PS00478 LIM_DOMAIN_1 [ SRS ]    PS00478 LIM_DOMAIN_1 [ Expasy ]
Prosite	PS50023 LIM_DOMAIN_2 [ SRS ]    PS50023 LIM_DOMAIN_2 [ Expasy ]
Interpro	IPR003128 Villin_headpiece [ SRS ]    IPR003128 Villin_headpiece [ EBI ]
Interpro	IPR001781 Znf_LIM [ SRS ]    IPR001781 Znf_LIM [ EBI ]
CluSTr	O14639
Pfam	PF00412 LIM [ SRS ]    PF00412 LIM [ Sanger ]    pfam00412 [ NCBI-CDD ]
Pfam	PF02209 VHP [ SRS ]    PF02209 VHP [ Sanger ]    pfam02209 [ NCBI-CDD ]
Smart	SM00132 LIM [EMBL]
Smart	SM00153 VHP [EMBL]
Prodom	PD000094 LIM[INRA-Toulouse]
Prodom	O14639 ABLM1_HUMAN [ Domain structure ]   O14639 ABLM1_HUMAN  [ sequences sharing at least 1 domain ]
Blocks	O14639
HPRD	03819
	Protein Interaction databases
DIP	O14639
IntAct	O14639
	Polymorphism : SNP, mutations, diseases
OMIM	602330    [ map ]
GENECLINICS	602330
SNP	ABLIM1 [dbSNP-NCBI]
SNP	NM_001003407 [SNP-NCI]
SNP	NM_001003408 [SNP-NCI]
SNP	NM_002313 [SNP-NCI]
SNP	NM_006720 [SNP-NCI]
SNP	ABLIM1 [GeneSNPs - Utah]  ABLIM1] [HGBASE - SRS]
HAPMAP	ABLIM1 [HAPMAP]
HGMD	ABLIM1
	General knowledge
Family Browser	ABLIM1 [UCSC Family Browser]
SOURCE	NM_001003407
SOURCE	NM_001003408
SOURCE	NM_002313
SOURCE	NM_006720
SMD	Hs.593868
SAGE	Hs.593868
GO	actin binding [Amigo]  actin binding
GO	actin binding [Amigo]  actin binding
GO	protein binding [Amigo]  protein binding
GO	cytoplasm [Amigo]  cytoplasm
GO	cytoskeleton organization and biogenesis [Amigo]  cytoskeleton organization and biogenesis
GO	visual perception [Amigo]  visual perception
GO	zinc ion binding [Amigo]  zinc ion binding
GO	organ morphogenesis [Amigo]  organ morphogenesis
GO	actin cytoskeleton [Amigo]  actin cytoskeleton
GO	metal ion binding [Amigo]  metal ion binding
KEGG	Axon guidance
PubGene	ABLIM1
TreeFam	ABLIM1
CTD	3983 [Comparative Genomics Database]
	Other databases
	Probes
Probe	ABLIM1 Related clones (RZPD - Berlin)
	PubMed
PubMed	19 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Thu May 22 19:54:09 2008