Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

ACACA (acetyl-CoA carboxylase alpha)

Identity

Alias (NCBI)ACAC
ACACAD
ACC
ACC1
ACCA
HGNC (Hugo) ACACA
HGNC Alias symbACC1
HGNC Alias nameacetyl-CoA carboxylase 1
HGNC Previous nameACAC
 ACC
HGNC Previous nameacetyl-Coenzyme A carboxylase alpha
LocusID (NCBI) 31
Atlas_Id 42971
Location 17q12  [Link to chromosome band 17q12]
Location_base_pair Starts at 37084992 and ends at 37406811 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ACACA (17q12) / ASIC2 (17q11.2)ACACA (17q12) / DDX52 (17q12)ACACA (17q12) / MGME1 (20p11.23)
ACACA (17q12) / PRKDC (8q11.21)ACACA (17q12) / SGTB (5q12.3)ACACA (17q12) / SRCIN1 (17q12)
ACACA (17q12) / STAC2 (17q12)ACACA (17q12) / TADA2A (17q12)CALR (19p13.2) / ACACA (17q12)
DOK3 (5q35.3) / ACACA (17q12)KMT2A (11q23.3) / ACACA (17q12)LOC100233209 () / ACACA (17q12)
MYO1D (17q11.2) / ACACA (17q12)NCOR1 (17p12) / ACACA (17q12)NF1 (17q11.2) / ACACA (17q12)
RGPD5 (2q13) / ACACA (17q12)ACACA 17q12 ACCN1ACACA 17q12 C20orf72
ACACA 17q12 / SRCIN1 17q12ACACA 17q12 / TADA2A 17q12MYO1D 17q11.2 / ACACA 17q12
NCOR1 17p12 / ACACA 17q12NF1 17q11.2 / ACACA 17q12

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



Other Leukemias implicated (Data extracted from papers in the Atlas) [ 3 ]
  t(11;17)(q23;q12-21) KMT2A/MLLT6
t(11;17)(q23;q21) KMT2A/ACACA
t(11;17)(q23;q12-21) KMT2A/LASP1


External links

Nomenclature
HGNC (Hugo)ACACA   84
Cards
Entrez_Gene (NCBI)ACACA    acetyl-CoA carboxylase alpha
AliasesACAC; ACACAD; ACC; ACC1; 
ACCA
GeneCards (Weizmann)ACACA
Ensembl hg19 (Hinxton)ENSG00000278540 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000278540 [Gene_View]  ENSG00000278540 [Sequence]  chr17:37084992-37406811 [Contig_View]  ACACA [Vega]
ICGC DataPortalENSG00000278540
TCGA cBioPortalACACA
AceView (NCBI)ACACA
Genatlas (Paris)ACACA
SOURCE (Princeton)ACACA
Genetics Home Reference (NIH)ACACA
Genomic and cartography
GoldenPath hg38 (UCSC)ACACA  -     chr17:37084992-37406811 -  17q12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ACACA  -     17q12   [Description]    (hg19-Feb_2009)
GoldenPathACACA - 17q12 [CytoView hg19]  ACACA - 17q12 [CytoView hg38]
ImmunoBaseENSG00000278540
Genome Data Viewer NCBIACACA [Mapview hg19]  
OMIM200350   613933   
Gene and transcription
Genbank (Entrez)AB209325 AB371587 AJ534888 AJ534889 AJ564444
RefSeq transcript (Entrez)NM_000664 NM_198834 NM_198835 NM_198836 NM_198837 NM_198838 NM_198839
Consensus coding sequences : CCDS (NCBI)ACACA
Gene ExpressionACACA [ NCBI-GEO ]   ACACA [ EBI - ARRAY_EXPRESS ]   ACACA [ SEEK ]   ACACA [ MEM ]
Gene Expression Viewer (FireBrowse)ACACA [ Firebrowse - Broad ]
GenevisibleExpression of ACACA in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)31
GTEX Portal (Tissue expression)ACACA
Human Protein AtlasENSG00000278540-ACACA [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ACACA
Human Protein Atlas [tissue]ENSG00000278540-ACACA [tissue]
HPRD01938
Protein Interaction databases
BioGRIDACACA
STRING (EMBL)ACACA
ZODIACACACA
Ontologies - Pathways
Litterature
PubMed155 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXACACA
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 14:58:08 CEST 2021

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.