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ACAD10 (acyl-CoA dehydrogenase family member 10)

Identity

Alias_namesacyl-Coenzyme A dehydrogenase family, member 10
acyl-CoA dehydrogenase family, member 10
Alias_symbol (synonym)MGC5601
Other alias-
HGNC (Hugo) ACAD10
LocusID (NCBI) 80724
Atlas_Id 54099
Location 12q24.12  [Link to chromosome band 12q24]
Location_base_pair Starts at 111686053 and ends at 111757107 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ACAD10 (12q24.12) / ACAD10 (12q24.12)ACAD10 (12q24.12) / MAPKAPK5 (12q24.12)ERP29 (12q24.13) / ACAD10 (12q24.12)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ACAD10   21597
Cards
Entrez_Gene (NCBI)ACAD10  80724  acyl-CoA dehydrogenase family member 10
Aliases
GeneCards (Weizmann)ACAD10
Ensembl hg19 (Hinxton)ENSG00000111271 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000111271 [Gene_View]  chr12:111686053-111757107 [Contig_View]  ACAD10 [Vega]
ICGC DataPortalENSG00000111271
TCGA cBioPortalACAD10
AceView (NCBI)ACAD10
Genatlas (Paris)ACAD10
WikiGenes80724
SOURCE (Princeton)ACAD10
Genetics Home Reference (NIH)ACAD10
Genomic and cartography
GoldenPath hg38 (UCSC)ACAD10  -     chr12:111686053-111757107 +  12q24.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ACAD10  -     12q24.12   [Description]    (hg19-Feb_2009)
EnsemblACAD10 - 12q24.12 [CytoView hg19]  ACAD10 - 12q24.12 [CytoView hg38]
Mapping of homologs : NCBIACAD10 [Mapview hg19]  ACAD10 [Mapview hg38]
OMIM611181   
Gene and transcription
Genbank (Entrez)AK092356 AK097425 AK310923 AL832043 AY323912
RefSeq transcript (Entrez)NM_001136538 NM_001136542 NM_025247
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ACAD10
Cluster EST : UnigeneHs.331141 [ NCBI ]
CGAP (NCI)Hs.331141
Alternative Splicing GalleryENSG00000111271
Gene ExpressionACAD10 [ NCBI-GEO ]   ACAD10 [ EBI - ARRAY_EXPRESS ]   ACAD10 [ SEEK ]   ACAD10 [ MEM ]
Gene Expression Viewer (FireBrowse)ACAD10 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)80724
GTEX Portal (Tissue expression)ACAD10
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6JQN1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6JQN1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6JQN1
Splice isoforms : SwissVarQ6JQN1
PhosPhoSitePlusQ6JQN1
Domains : Interpro (EBI)Acyl-CoA_Oxase/DH_cen-dom    AcylCo_DH/oxidase_C    AcylCoA_DH/ox_N    AcylCoA_DH/oxidase_NM_dom    Aminoglycoside_PTrfase    HAD-like_dom    HAD-SF_hydro_IA    HAD-SF_ppase_IA/epoxid_hydro_N    Kinase-like_dom    PGP_dom2   
Domain families : Pfam (Sanger)Acyl-CoA_dh_1 (PF00441)    Acyl-CoA_dh_M (PF02770)    Acyl-CoA_dh_N (PF02771)    APH (PF01636)    HAD_2 (PF13419)   
Domain families : Pfam (NCBI)pfam00441    pfam02770    pfam02771    pfam01636    pfam13419   
Conserved Domain (NCBI)ACAD10
DMDM Disease mutations80724
Blocks (Seattle)ACAD10
SuperfamilyQ6JQN1
Human Protein AtlasENSG00000111271
Peptide AtlasQ6JQN1
HPRD10625
IPIIPI00418639   IPI00843833   IPI00797832   IPI00843880   IPI01022467   IPI01020772   IPI01022216   IPI01021084   IPI01020918   IPI01022957   IPI01022793   IPI01021991   IPI00914926   
Protein Interaction databases
DIP (DOE-UCLA)Q6JQN1
IntAct (EBI)Q6JQN1
FunCoupENSG00000111271
BioGRIDACAD10
STRING (EMBL)ACAD10
ZODIACACAD10
Ontologies - Pathways
QuickGOQ6JQN1
Ontology : AmiGOacyl-CoA dehydrogenase activity  mitochondrion  mitochondrial matrix  fatty acid beta-oxidation  hydrolase activity  flavin adenine dinucleotide binding  
Ontology : EGO-EBIacyl-CoA dehydrogenase activity  mitochondrion  mitochondrial matrix  fatty acid beta-oxidation  hydrolase activity  flavin adenine dinucleotide binding  
NDEx NetworkACAD10
Atlas of Cancer Signalling NetworkACAD10
Wikipedia pathwaysACAD10
Orthology - Evolution
OrthoDB80724
GeneTree (enSembl)ENSG00000111271
Phylogenetic Trees/Animal Genes : TreeFamACAD10
HOVERGENQ6JQN1
HOGENOMQ6JQN1
Homologs : HomoloGeneACAD10
Homology/Alignments : Family Browser (UCSC)ACAD10
Gene fusions - Rearrangements
Fusion : MitelmanACAD10/MAPKAPK5 [12q24.12/12q24.12]  
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerACAD10 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ACAD10
dbVarACAD10
ClinVarACAD10
1000_GenomesACAD10 
Exome Variant ServerACAD10
ExAC (Exome Aggregation Consortium)ACAD10 (select the gene name)
Genetic variants : HAPMAP80724
Genomic Variants (DGV)ACAD10 [DGVbeta]
DECIPHERACAD10 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisACAD10 
Mutations
ICGC Data PortalACAD10 
TCGA Data PortalACAD10 
Broad Tumor PortalACAD10
OASIS PortalACAD10 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICACAD10  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDACAD10
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch ACAD10
DgiDB (Drug Gene Interaction Database)ACAD10
DoCM (Curated mutations)ACAD10 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ACAD10 (select a term)
intoGenACAD10
Cancer3DACAD10(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611181   
Orphanet
MedgenACAD10
Genetic Testing Registry ACAD10
NextProtQ6JQN1 [Medical]
TSGene80724
GENETestsACAD10
Target ValidationACAD10
Huge Navigator ACAD10 [HugePedia]
snp3D : Map Gene to Disease80724
BioCentury BCIQACAD10
ClinGenACAD10
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD80724
Chemical/Pharm GKB GenePA134976754
Clinical trialACAD10
Miscellaneous
canSAR (ICR)ACAD10 (select the gene name)
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineACAD10
EVEXACAD10
GoPubMedACAD10
iHOPACAD10
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 25 18:55:49 CEST 2017

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