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ACAD11 (acyl-CoA dehydrogenase family member 11)

Identity

Alias (NCBI)ACAD-11
HGNC (Hugo) ACAD11
HGNC Alias symbFLJ12592
HGNC Previous nameacyl-Coenzyme A dehydrogenase family, member 11
 acyl-CoA dehydrogenase family, member 11
LocusID (NCBI) 84129
Atlas_Id 54100
Location 3q22.1  [Link to chromosome band 3q22]
Location_base_pair Starts at 132558141 and ends at 132659809 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ACAD11 (3q22.1) / CBFA2T2 (20q11.21)ACAD11 (3q22.1) / TRAPPC13 (5q12.3)CPNE4 (3q22.1) / ACAD11 (3q22.1)
LRRC40 (1p31.1) / ACAD11 (3q22.1)NPHP3 (3q22.1) / ACAD11 (3q22.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)ACAD11   30211
Cards
Entrez_Gene (NCBI)ACAD11    acyl-CoA dehydrogenase family member 11
AliasesACAD-11
GeneCards (Weizmann)ACAD11
Ensembl hg19 (Hinxton)ENSG00000240303 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000240303 [Gene_View]  ENSG00000240303 [Sequence]  chr3:132558141-132659809 [Contig_View]  ACAD11 [Vega]
ICGC DataPortalENSG00000240303
TCGA cBioPortalACAD11
AceView (NCBI)ACAD11
Genatlas (Paris)ACAD11
SOURCE (Princeton)ACAD11
Genetics Home Reference (NIH)ACAD11
Genomic and cartography
GoldenPath hg38 (UCSC)ACAD11  -     chr3:132558141-132659809 -  3q22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ACAD11  -     3q22.1   [Description]    (hg19-Feb_2009)
GoldenPathACAD11 - 3q22.1 [CytoView hg19]  ACAD11 - 3q22.1 [CytoView hg38]
ImmunoBaseENSG00000240303
Genome Data Viewer NCBIACAD11 [Mapview hg19]  
OMIM614288   
Gene and transcription
Genbank (Entrez)AI091999 AJ608287 AK022654 AK131265 AK298627
RefSeq transcript (Entrez)NM_032169
Consensus coding sequences : CCDS (NCBI)ACAD11
Gene ExpressionACAD11 [ NCBI-GEO ]   ACAD11 [ EBI - ARRAY_EXPRESS ]   ACAD11 [ SEEK ]   ACAD11 [ MEM ]
Gene Expression Viewer (FireBrowse)ACAD11 [ Firebrowse - Broad ]
GenevisibleExpression of ACAD11 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84129
GTEX Portal (Tissue expression)ACAD11
Human Protein AtlasENSG00000240303-ACAD11 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ709F0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ709F0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ709F0
PhosPhoSitePlusQ709F0
Domains : Interpro (EBI)ACAD10_11_N    Acyl-CoA_Oxase/DH_cen-dom    AcylCo_DH-like_C    AcylCo_DH/oxidase_C    AcylCoA_DH/ox_N    AcylCoA_DH/ox_N_sf    AcylCoA_DH/oxidase_NM_dom    Aminoglycoside_PTrfase    Kinase-like_dom_sf   
Domain families : Pfam (Sanger)Acyl-CoA_dh_1 (PF00441)    Acyl-CoA_dh_M (PF02770)    Acyl-CoA_dh_N (PF02771)    APH (PF01636)   
Domain families : Pfam (NCBI)pfam00441    pfam02770    pfam02771    pfam01636   
Conserved Domain (NCBI)ACAD11
PDB (RSDB)2WBI   
PDB Europe2WBI   
PDB (PDBSum)2WBI   
PDB (IMB)2WBI   
Structural Biology KnowledgeBase2WBI   
SCOP (Structural Classification of Proteins)2WBI   
CATH (Classification of proteins structures)2WBI   
SuperfamilyQ709F0
AlphaFold pdb e-kbQ709F0   
Human Protein Atlas [tissue]ENSG00000240303-ACAD11 [tissue]
HPRD13352
Protein Interaction databases
DIP (DOE-UCLA)Q709F0
IntAct (EBI)Q709F0
BioGRIDACAD11
STRING (EMBL)ACAD11
ZODIACACAD11
Ontologies - Pathways
QuickGOQ709F0
Ontology : AmiGOlong-chain-acyl-CoA dehydrogenase activity  protein binding  nucleus  mitochondrion  mitochondrial inner membrane  peroxisome  fatty acid beta-oxidation  very-long-chain-acyl-CoA dehydrogenase activity  mitochondrial membrane  fatty acid beta-oxidation using acyl-CoA dehydrogenase  flavin adenine dinucleotide binding  medium-chain-acyl-CoA dehydrogenase activity  
Ontology : EGO-EBIlong-chain-acyl-CoA dehydrogenase activity  protein binding  nucleus  mitochondrion  mitochondrial inner membrane  peroxisome  fatty acid beta-oxidation  very-long-chain-acyl-CoA dehydrogenase activity  mitochondrial membrane  fatty acid beta-oxidation using acyl-CoA dehydrogenase  flavin adenine dinucleotide binding  medium-chain-acyl-CoA dehydrogenase activity  
NDEx NetworkACAD11
Atlas of Cancer Signalling NetworkACAD11
Wikipedia pathwaysACAD11
Orthology - Evolution
OrthoDB84129
GeneTree (enSembl)ENSG00000240303
Phylogenetic Trees/Animal Genes : TreeFamACAD11
Homologs : HomoloGeneACAD11
Homology/Alignments : Family Browser (UCSC)ACAD11
Gene fusions - Rearrangements
Fusion : MitelmanACAD11/TRAPPC13 [3q22.1/5q12.3]  
Fusion : MitelmanCPNE4/ACAD11 [3q22.1/3q22.1]  
Fusion : QuiverACAD11
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerACAD11 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ACAD11
dbVarACAD11
ClinVarACAD11
MonarchACAD11
1000_GenomesACAD11 
Exome Variant ServerACAD11
GNOMAD BrowserENSG00000240303
Varsome BrowserACAD11
ACMGACAD11 variants
VarityQ709F0
Genomic Variants (DGV)ACAD11 [DGVbeta]
DECIPHERACAD11 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisACAD11 
Mutations
ICGC Data PortalACAD11 
TCGA Data PortalACAD11 
Broad Tumor PortalACAD11
OASIS PortalACAD11 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICACAD11  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DACAD11
Mutations and Diseases : HGMDACAD11
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaACAD11
DgiDB (Drug Gene Interaction Database)ACAD11
DoCM (Curated mutations)ACAD11
CIViC (Clinical Interpretations of Variants in Cancer)ACAD11
Cancer3DACAD11
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614288   
Orphanet
DisGeNETACAD11
MedgenACAD11
Genetic Testing Registry ACAD11
NextProtQ709F0 [Medical]
GENETestsACAD11
Target ValidationACAD11
Huge Navigator ACAD11 [HugePedia]
ClinGenACAD11
Clinical trials, drugs, therapy
MyCancerGenomeACAD11
Protein Interactions : CTDACAD11
Pharm GKB GenePA142672658
PharosQ709F0
Clinical trialACAD11
Miscellaneous
canSAR (ICR)ACAD11
HarmonizomeACAD11
DataMed IndexACAD11
Probes
Litterature
PubMed46 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXACAD11
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 14:58:09 CEST 2021

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